| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424768
Identifier: 158424768
GI number: 158424768
Start: 3599448
End: 3599654
Strand: Reverse
Name: 158424768
Synonym: AZC_3144
Alternate gene names: NA
Gene position: 3599654-3599448 (Counterclockwise)
Preceding gene: 158424769
Following gene: 158424766
Centisome position: 67.04
GC content: 65.7
Gene sequence:
>207_bases ATGAGCGACGAGACCGCCAAGCCGTTCGAGCCCAAGCCGTGTCCGATCTGCGGCAAGCCGTCCATCGAGCGCTACAAGCC GTTCTGCTCCAAGCGCTGCGCCGATGTGGACCTCAATCGCTGGCTGACTGGTGCCTACGCCATTCCCGTCGTCGAGGAAG AGGACGAGGACGGCGAACCGCTGTCGCCGCCCCTGCGCCCCGAGTAA
Upstream 100 bases:
>100_bases GCTCCTACACCAGCGTGGTCGGCCTGCCGCTCGCCGAGACGGTGGCGCTCCTGAACGGCGAGGGCTACCCCGTCCGAACC GGCTGGGTGGAGAGCGCCGC
Downstream 100 bases:
>100_bases GGCGGTGGGTCAACCGCACGCCCAGTCGAACTTCATCTCCTTGAAGTCGAGCTGGGCGTTGCCGCCACCGAAATTGTAGC CCCCGAAGTCCTCCTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSDETAKPFEPKPCPICGKPSIERYKPFCSKRCADVDLNRWLTGAYAIPVVEEEDEDGEPLSPPLRPE
Sequences:
>Translated_68_residues MSDETAKPFEPKPCPICGKPSIERYKPFCSKRCADVDLNRWLTGAYAIPVVEEEDEDGEPLSPPLRPE >Mature_67_residues SDETAKPFEPKPCPICGKPSIERYKPFCSKRCADVDLNRWLTGAYAIPVVEEEDEDGEPLSPPLRPE
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3144_AZOC5 (A8IC06)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001526060.1 - ProteinModelPortal: A8IC06 - SMR: A8IC06 - GeneID: 5688242 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3144 - HOGENOM: HBG552546 - OMA: KPSIERY - BioCyc: ACAU438753:AZC_3144-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 7650; Mature: 7518
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDETAKPFEPKPCPICGKPSIERYKPFCSKRCADVDLNRWLTGAYAIPVVEEEDEDGEP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCC LSPPLRPE CCCCCCCC >Mature Secondary Structure SDETAKPFEPKPCPICGKPSIERYKPFCSKRCADVDLNRWLTGAYAIPVVEEEDEDGEP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCC LSPPLRPE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA