| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424736
Identifier: 158424736
GI number: 158424736
Start: 3564176
End: 3565201
Strand: Reverse
Name: 158424736
Synonym: AZC_3112
Alternate gene names: NA
Gene position: 3565201-3564176 (Counterclockwise)
Preceding gene: 158424737
Following gene: 158424735
Centisome position: 66.39
GC content: 65.69
Gene sequence:
>1026_bases ATGAACCCGGCCAACCCCACCCGCGTCGCACGCTATCTGGCTTCGGCTGCGGTCAAGGTCTTCACCGGCTTCGACGCCAC GGCGGATCTGCGCAAGGCACTCGGCCTCATGGTCGCGCCCGAGACGGTGGAGGAGATGCCCGAGGACAAGGCGCTTGAAG GCATGGGCCGCCGCGTGGTGCGGGCTCTGGCACCGGCCGACCAGCGGCCGGTGTGCCTGTTCGTGACCTATTCTCCCGAT GGCCGGATCTGGCCGCACGTCATCAGCTATTGCAAGGATCTGAAGGCGGGGGGCTGCCGGCTGGTGATGATTGTCACCAC CGACCGCACCGACCTCAAATGTTACGATCCGGGCCTGGCTGTCGCCGATTCGCTCATCGTGCTCGAGAATTTCGGCTACG ACTTCTCGGCTTGGGCGCGCGTGCTCCGGCTGTGGCCGGAACTCTGGGCGGCGCCAGCCCTGTGGTTCGCCAACGACAGC GTCTACAATTCCCCGAGCGTGCTCGCCTCCATGCTGGAGCGCGTGAAGCGTAGCGTCGCCGACGTGGTGGCGCTGACCGA GAGCACCGCATTCCGCCGTCATTTCCAGAGCTATTTCTTCGTCCTACGCCCGAACGCCCTGGCCAGCGAGCCGGTGCGGG CCTTCTTCGGCGAGATGCGGGCCATCTTCGACAAGCAGAAGGTGATCGAGACCTGTGAGGTGCCGTTCCCGAGCATCCTC TCCAGCGCCGGACTGATGGTGGACGTGCTCTATCCGCTCGGCCTGACCGACGCGCGGGCGGCCAATCCCACGCTGATGGC GTGGAACGAATTGCTGAAGAACGGCTTCCCGTTCGTGAAGGTGCAGCTGCTGCGCGAGAATCCCATGCATGTGGACCTCT CCAAGTGGCGGGCCGATCTGAAGGCGTGCGGATTCCGTATGGATGAGGTGGAGATGCACGTGGGCAGCCATCGCATCCCC GCGGCGGCGCTCCTCCAGGCGCCGGTCCAGAAGCCGTCCGAGAAGACGCCCGCCGCAGCCTCCTGA
Upstream 100 bases:
>100_bases TGATCCGTTCCGGCAAGATCGCCGGCCTGTGTGACAGGCTGGCCCTTCCCACCGTACAGGCGCGCACCGGGGGGGCGGAC GCGTTTGAGAAAGGACGTCG
Downstream 100 bases:
>100_bases CTGGAACGCCCGGCGGCGGGTCACAAGGCGGTGCTTGCGCGTTGCGTTGCGGGGGCGGACTGTGTAACCCGTCCTTTCCC GGTGAGAGGCCGGAGCGGAG
Product: glycosyltransferase
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis Protein-Like; Lipopolysaccharide Biosynthesis Protein-Like Protein; Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNPANPTRVARYLASAAVKVFTGFDATADLRKALGLMVAPETVEEMPEDKALEGMGRRVVRALAPADQRPVCLFVTYSPD GRIWPHVISYCKDLKAGGCRLVMIVTTDRTDLKCYDPGLAVADSLIVLENFGYDFSAWARVLRLWPELWAAPALWFANDS VYNSPSVLASMLERVKRSVADVVALTESTAFRRHFQSYFFVLRPNALASEPVRAFFGEMRAIFDKQKVIETCEVPFPSIL SSAGLMVDVLYPLGLTDARAANPTLMAWNELLKNGFPFVKVQLLRENPMHVDLSKWRADLKACGFRMDEVEMHVGSHRIP AAALLQAPVQKPSEKTPAAAS
Sequences:
>Translated_341_residues MNPANPTRVARYLASAAVKVFTGFDATADLRKALGLMVAPETVEEMPEDKALEGMGRRVVRALAPADQRPVCLFVTYSPD GRIWPHVISYCKDLKAGGCRLVMIVTTDRTDLKCYDPGLAVADSLIVLENFGYDFSAWARVLRLWPELWAAPALWFANDS VYNSPSVLASMLERVKRSVADVVALTESTAFRRHFQSYFFVLRPNALASEPVRAFFGEMRAIFDKQKVIETCEVPFPSIL SSAGLMVDVLYPLGLTDARAANPTLMAWNELLKNGFPFVKVQLLRENPMHVDLSKWRADLKACGFRMDEVEMHVGSHRIP AAALLQAPVQKPSEKTPAAAS >Mature_341_residues MNPANPTRVARYLASAAVKVFTGFDATADLRKALGLMVAPETVEEMPEDKALEGMGRRVVRALAPADQRPVCLFVTYSPD GRIWPHVISYCKDLKAGGCRLVMIVTTDRTDLKCYDPGLAVADSLIVLENFGYDFSAWARVLRLWPELWAAPALWFANDS VYNSPSVLASMLERVKRSVADVVALTESTAFRRHFQSYFFVLRPNALASEPVRAFFGEMRAIFDKQKVIETCEVPFPSIL SSAGLMVDVLYPLGLTDARAANPTLMAWNELLKNGFPFVKVQLLRENPMHVDLSKWRADLKACGFRMDEVEMHVGSHRIP AAALLQAPVQKPSEKTPAAAS
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37821; Mature: 37821
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPANPTRVARYLASAAVKVFTGFDATADLRKALGLMVAPETVEEMPEDKALEGMGRRVV CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEECCHHHHHCCCHHHHHHHHHHHH RALAPADQRPVCLFVTYSPDGRIWPHVISYCKDLKAGGCRLVMIVTTDRTDLKCYDPGLA HHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHH VADSLIVLENFGYDFSAWARVLRLWPELWAAPALWFANDSVYNSPSVLASMLERVKRSVA HHHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH DVVALTESTAFRRHFQSYFFVLRPNALASEPVRAFFGEMRAIFDKQKVIETCEVPFPSIL HHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSAGLMVDVLYPLGLTDARAANPTLMAWNELLKNGFPFVKVQLLRENPMHVDLSKWRADL HCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHH KACGFRMDEVEMHVGSHRIPAAALLQAPVQKPSEKTPAAAS HHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNPANPTRVARYLASAAVKVFTGFDATADLRKALGLMVAPETVEEMPEDKALEGMGRRVV CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEECCHHHHHCCCHHHHHHHHHHHH RALAPADQRPVCLFVTYSPDGRIWPHVISYCKDLKAGGCRLVMIVTTDRTDLKCYDPGLA HHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHH VADSLIVLENFGYDFSAWARVLRLWPELWAAPALWFANDSVYNSPSVLASMLERVKRSVA HHHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH DVVALTESTAFRRHFQSYFFVLRPNALASEPVRAFFGEMRAIFDKQKVIETCEVPFPSIL HHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSAGLMVDVLYPLGLTDARAANPTLMAWNELLKNGFPFVKVQLLRENPMHVDLSKWRADL HCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHH KACGFRMDEVEMHVGSHRIPAAALLQAPVQKPSEKTPAAAS HHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA