| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158424665
GI number: 158424665
Start: 3474516
End: 3476078
Strand: Direct
Name: gsiB [H]
Synonym: AZC_3041
Alternate gene names: 158424665
Gene position: 3474516-3476078 (Clockwise)
Preceding gene: 158424664
Following gene: 158424666
Centisome position: 64.71
GC content: 65.9
Gene sequence:
>1563_bases TTGCCGCCCCCGCCCGCTTTCGCGGAGACGATGGACATGGCCGACCTGACCCGACGCTCAGTTCTCACCGGCGCCGCAGC GGCGGCCATGGTGCCGCTGCTGCGCATTCCCGGCGCCAAGGCGCGCACGCCCGGCATTCTGACCTTCGGCATCTCCTCCT TCCCGCCCAGCGTCCAGCCCTGGGCCAATGCCGGCACCGCTTCCGCCACGGTGAAGCTCGCACTCTATCGCGGCCTCACC TCCTATGGGCCGGACGGCAAGCTGCGTGGCGAGCTGGCGGAAAGCTGGGCGCCGGAAGGCAAGAATGTCTGGGTGTTCAA GCTGCGCGACGCCACCTTCTCCAACGGCGACAAGGTCACGTCGGCGGATGTGAAGTGGACCATCGAGCAGGTGGCCGGCG AGAAATCCACCGCCTTCCTGCGCAACGAGATGCAGGGCGTGGAGAAGATCGAGACGCCCGACGACAAGACCGTCCGCCTC ACCATGAAGCAGCCCTCGGCGACGCTGCCGCTGCTGATGGCGAGCTACCACATGCCCATCATGTCGAAGGCTTCCACCGC CTCGCAGCAGATCGGCGCCGGCCCGTTCATCCTCAAGGATGCCGAGCGCGGCGTCTCCATGGATCTGGAAGCCAATCCCA AATACTACCGGCCCGGCCTGCCCAAGCTGAAAGGCATCCGCGTCATGGTCTATGCGGATGAGAACCTGCGCGTCGCAGCG CTCCAGAGCGGCGACGTGGACCTCATCGAATATGTGCCGTGGCAGGCCATGACCAGCATCGAGCAGAATGCGCAGCTGAA GCTCGATGCCGTGGACGGCCCGTTCATGTCGCTGATCTTCAATGGCTCGCGCCCGCCCTTCAACGATCCGAAGGTGCGCA AGGCGGTGGCCCACGCCATCCGCCGCGAGGAGATCGTGAAGAGCGCCTTCTTCGGCCGCGGCGCGCCGCTGGCGCATCTG CCCATCCCGAAGGCGAGCCCCTTCTTCAACGCCGATCTGGCGGAAGGCTGGGCCTATAATCCGGACCTCTCCAAGAAGCT GCTGGCGGAGGCCGGGCATGGCGGCGGCCTCTCCTGCAAGCTGCTCTCCACGGCGCAGTACGGCATGCACAAGGACACGG CGGAAGTGGTGCAGCAGCATCTCGCCGCCGTGGGCATCAATGTGGAGCTGAACCTGCCGGACTGGGCGACCCGCGTGGCC CTGGGCAATCGCGGCCAATATGATCTGGCGGTGATGGGCACGTCTGCGGACAGCAACGACCCGGACGGCCTTTCGGCCTA TGTGGACGGCAGCCTCTCGCCATCTTACGTGCGCAGCTTCAACCTCTCCATTCCGAAGCTCACCGAGCTGTTCCAGGCCG GCCGCGAGGAATTCGACGAGGCCAAGCGCAAGGCCATCTATCACGAGCTGGAACAGGTGGCGATCGACCAGGTGCCCATG GTGGGCCTCGCCCTGCGCAGCCAGGGCTACGCCATGCGCAAGGACGTGACCGGCTTCACCAACATGCCCGGCGCGCTCAC CTTCTATTCCGGCGAGACCTTCGAAACGACCTCGGTGGGCTGA
Upstream 100 bases:
>100_bases CCTCTTTGCCGGCCGCCGCTTCCTTCAAGGCCGCGCGCCCGAGAGGCGCGCCGCATCTTCACGCCGACGCCTTTTCTGTC CCATTCCGGGCCGGGCGCCG
Downstream 100 bases:
>100_bases TGAACGCGCGCGCGGACATCGGGATGGATGGGCGGGCCAGTCCCCTCCCCCTTTTCGGGGGCGGGTTCGGGAGGGGAGCC GGACGCTCTCTCCATGCCCG
Product: twin-arginine translocation pathway signal precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MPPPPAFAETMDMADLTRRSVLTGAAAAAMVPLLRIPGAKARTPGILTFGISSFPPSVQPWANAGTASATVKLALYRGLT SYGPDGKLRGELAESWAPEGKNVWVFKLRDATFSNGDKVTSADVKWTIEQVAGEKSTAFLRNEMQGVEKIETPDDKTVRL TMKQPSATLPLLMASYHMPIMSKASTASQQIGAGPFILKDAERGVSMDLEANPKYYRPGLPKLKGIRVMVYADENLRVAA LQSGDVDLIEYVPWQAMTSIEQNAQLKLDAVDGPFMSLIFNGSRPPFNDPKVRKAVAHAIRREEIVKSAFFGRGAPLAHL PIPKASPFFNADLAEGWAYNPDLSKKLLAEAGHGGGLSCKLLSTAQYGMHKDTAEVVQQHLAAVGINVELNLPDWATRVA LGNRGQYDLAVMGTSADSNDPDGLSAYVDGSLSPSYVRSFNLSIPKLTELFQAGREEFDEAKRKAIYHELEQVAIDQVPM VGLALRSQGYAMRKDVTGFTNMPGALTFYSGETFETTSVG
Sequences:
>Translated_520_residues MPPPPAFAETMDMADLTRRSVLTGAAAAAMVPLLRIPGAKARTPGILTFGISSFPPSVQPWANAGTASATVKLALYRGLT SYGPDGKLRGELAESWAPEGKNVWVFKLRDATFSNGDKVTSADVKWTIEQVAGEKSTAFLRNEMQGVEKIETPDDKTVRL TMKQPSATLPLLMASYHMPIMSKASTASQQIGAGPFILKDAERGVSMDLEANPKYYRPGLPKLKGIRVMVYADENLRVAA LQSGDVDLIEYVPWQAMTSIEQNAQLKLDAVDGPFMSLIFNGSRPPFNDPKVRKAVAHAIRREEIVKSAFFGRGAPLAHL PIPKASPFFNADLAEGWAYNPDLSKKLLAEAGHGGGLSCKLLSTAQYGMHKDTAEVVQQHLAAVGINVELNLPDWATRVA LGNRGQYDLAVMGTSADSNDPDGLSAYVDGSLSPSYVRSFNLSIPKLTELFQAGREEFDEAKRKAIYHELEQVAIDQVPM VGLALRSQGYAMRKDVTGFTNMPGALTFYSGETFETTSVG >Mature_519_residues PPPPAFAETMDMADLTRRSVLTGAAAAAMVPLLRIPGAKARTPGILTFGISSFPPSVQPWANAGTASATVKLALYRGLTS YGPDGKLRGELAESWAPEGKNVWVFKLRDATFSNGDKVTSADVKWTIEQVAGEKSTAFLRNEMQGVEKIETPDDKTVRLT MKQPSATLPLLMASYHMPIMSKASTASQQIGAGPFILKDAERGVSMDLEANPKYYRPGLPKLKGIRVMVYADENLRVAAL QSGDVDLIEYVPWQAMTSIEQNAQLKLDAVDGPFMSLIFNGSRPPFNDPKVRKAVAHAIRREEIVKSAFFGRGAPLAHLP IPKASPFFNADLAEGWAYNPDLSKKLLAEAGHGGGLSCKLLSTAQYGMHKDTAEVVQQHLAAVGINVELNLPDWATRVAL GNRGQYDLAVMGTSADSNDPDGLSAYVDGSLSPSYVRSFNLSIPKLTELFQAGREEFDEAKRKAIYHELEQVAIDQVPMV GLALRSQGYAMRKDVTGFTNMPGALTFYSGETFETTSVG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=476, Percent_Identity=26.890756302521, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787762, Length=518, Percent_Identity=26.4478764478764, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1789966, Length=375, Percent_Identity=24, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787495, Length=511, Percent_Identity=24.0704500978474, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1787551, Length=521, Percent_Identity=25.3358925143954, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87081878, Length=490, Percent_Identity=22.0408163265306, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1789397, Length=491, Percent_Identity=22.1995926680244, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56275; Mature: 56144
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPPAFAETMDMADLTRRSVLTGAAAAAMVPLLRIPGAKARTPGILTFGISSFPPSVQP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC WANAGTASATVKLALYRGLTSYGPDGKLRGELAESWAPEGKNVWVFKLRDATFSNGDKVT CCCCCCCHHEEEEEEHHCCHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEE SADVKWTIEQVAGEKSTAFLRNEMQGVEKIETPDDKTVRLTMKQPSATLPLLMASYHMPI CCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCH MSKASTASQQIGAGPFILKDAERGVSMDLEANPKYYRPGLPKLKGIRVMVYADENLRVAA HHCCCHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEE LQSGDVDLIEYVPWQAMTSIEQNAQLKLDAVDGPFMSLIFNGSRPPFNDPKVRKAVAHAI ECCCCEEHHHHCCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHH RREEIVKSAFFGRGAPLAHLPIPKASPFFNADLAEGWAYNPDLSKKLLAEAGHGGGLSCK HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEE LLSTAQYGMHKDTAEVVQQHLAAVGINVELNLPDWATRVALGNRGQYDLAVMGTSADSND EEEHHHCCCCCCHHHHHHHHHHHEECEEEEECCCHHHHHEECCCCCEEEEEEECCCCCCC PDGLSAYVDGSLSPSYVRSFNLSIPKLTELFQAGREEFDEAKRKAIYHELEQVAIDQVPM CCCEEEEECCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VGLALRSQGYAMRKDVTGFTNMPGALTFYSGETFETTSVG HHHHHHCCCCEEHHCCCCCCCCCCEEEEECCCEEECCCCC >Mature Secondary Structure PPPPAFAETMDMADLTRRSVLTGAAAAAMVPLLRIPGAKARTPGILTFGISSFPPSVQP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC WANAGTASATVKLALYRGLTSYGPDGKLRGELAESWAPEGKNVWVFKLRDATFSNGDKVT CCCCCCCHHEEEEEEHHCCHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEE SADVKWTIEQVAGEKSTAFLRNEMQGVEKIETPDDKTVRLTMKQPSATLPLLMASYHMPI CCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCH MSKASTASQQIGAGPFILKDAERGVSMDLEANPKYYRPGLPKLKGIRVMVYADENLRVAA HHCCCHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEE LQSGDVDLIEYVPWQAMTSIEQNAQLKLDAVDGPFMSLIFNGSRPPFNDPKVRKAVAHAI ECCCCEEHHHHCCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHH RREEIVKSAFFGRGAPLAHLPIPKASPFFNADLAEGWAYNPDLSKKLLAEAGHGGGLSCK HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEE LLSTAQYGMHKDTAEVVQQHLAAVGINVELNLPDWATRVALGNRGQYDLAVMGTSADSND EEEHHHCCCCCCHHHHHHHHHHHEECEEEEECCCHHHHHEECCCCCEEEEEEECCCCCCC PDGLSAYVDGSLSPSYVRSFNLSIPKLTELFQAGREEFDEAKRKAIYHELEQVAIDQVPM CCCEEEEECCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VGLALRSQGYAMRKDVTGFTNMPGALTFYSGETFETTSVG HHHHHHCCCCEEHHCCCCCCCCCCEEEEECCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA