| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is agaG
Identifier: 158424664
GI number: 158424664
Start: 3472750
End: 3474402
Strand: Direct
Name: agaG
Synonym: AZC_3040
Alternate gene names: NA
Gene position: 3472750-3474402 (Clockwise)
Preceding gene: 158424663
Following gene: 158424665
Centisome position: 64.67
GC content: 68.97
Gene sequence:
>1653_bases ATGACCCTGAAGCCCTCTCTCGCGCCCTCCGCCGCGCCGGCCCTTGATCCGATCACCGTCGAGGTGATCGGGGCCGCCCT CTCCTCCATCGTGGAAGAGACCGGCGAGGCGCTGATCCGCGCCTCCTATTCCACCAACATCAAGGAGCGGCGTGACTGCT CCACGGCGCTGTTCGACGCCGCCGGCAACACGCTCTGCCAGGCCGAGCACATCCCCATCCATCTCGGCAGCTTCATCGGC ATCGTGCCGCATATCCTGAAGCTGCACCCCACCTCCGAGATGAAGCCGGGCGACGTGTTCGTGGGCAACGACGCCTATGC GGGCGGCGGCACCCATCTGCCGGACATCGTGCTGGCCGAGCCCATCTTCATCGACGGTGCCATCGCCGCCTGGACGGTGA ACCTCGCCCACCATTCGGACTTCGCTGACCGCGGCCACGCCCACATCTATCAGGAAGGCCTGCGCATCCCGCCCGTACGG CTCTATCGCGCCGGCGAGCTGAACAAGGATGTGCAGGATCTCATCCTGCTCAACTGCCAGGTGCCGCATGAGCGCCTGTC GGACCTGCGCGCCCAGATGGCGGCCAACCGCGTCGGCGTGCAGCGCTTCCAGGCACTCTGCGCCAAGTATGGCACGCAGG TGGTTCTGGCGGCGGGCGATGCCCTCATGGACTATGCCGAACGCCGCATGCGCGCCGGCATAGCCGCCATTCCGGACGGC ACCTACCGCTTCGCGGACGTGTTCGACAATCCGGAGATTGACACCACCCTGCCGCTCAGCGTCGAGGTCACCGTCAAGGG CGATGCCATGACGCTGCATTTCGATGCGCCGGACCAGCTCCGCGCCGGCATCAACATGACCCACACCGCACTGCAGGCGA CCGCCTATTATGTGGTGAAGTCGGTGGTGGACCCCACGATCCTGCCCAACGCAGGCCTCGCCCGCCCGCTCACCGTCACC GCCCGGCAGGGCAGCGTGGTGAGCTGCGTGCATCCGGCCGCGGTGAACGGCCGCGTGCAGACCTGCCAGCGCGTGTCCGA CCTCATCCTCGGCGCCCTCGCCCAGGCGGTGCCGCACAAGGTGACGGCCTGCTCCAACAGTGCCTGCACGGTGGCCACCT TCATCGGCCAGCGCAAGGACACCGGCGCCATCTGGGTCTACCTCGAGACCATGGGCGGCGGCGGCGGCGCGCGCCATGAC AAGGACGGCCTCGACGGCGTGCATGTCCATGTCACCAACACCTCCAATCTGCCCATCGAGGCGCTGGAGACCGAATATCC GCTCACCCTGCTGCGCTACGAGCTGGTGGACGGCTCCGGCGGCGTCGGGCGCTATCGCGGCGGCCTCGGCCTCCGGCGCG TCTATCGGGCAGACGAGGACTGCCGCGTGCGCGTGGACGTCTCGCGCATTCATTCCCGCAGCTGGGGGCTCGATGGCGGC GGCGCGGGCGGCAATGGCGGCGTGGAATGCGGCCCCGGCGTGCTGCGCGAGCGCGATGCCCTGACCCTCAAGGCCGGCCA GTGGTTCGCGGTGGTGAGCCCCGGCGCCGGCGGCTATGGCGCCCCCGCCGAGCGCGACCGCGCGGCAGTGACCCGCGACA TCGAGGAAGGCGTCATCGACCTTCCGACGGCCCGCGAGATCTACGGCTACTGA
Upstream 100 bases:
>100_bases GCCCCGCCATCGTCGAGCAGATGGACACCACCACCGTCGTCCCGCCGGGCATGACCGCCCGCGTGGACGCCTATCACAAC CTCATCCTCGAGGTGGCGGC
Downstream 100 bases:
>100_bases GCCTCTCCGGCGGCCTCTTTGCCGGCCGCCGCTTCCTTCAAGGCCGCGCGCCCGAGAGGCGCGCCGCATCTTCACGCCGA CGCCTTTTCTGTCCCATTCC
Product: AgaG protein
Products: ADP; phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTLKPSLAPSAAPALDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDAAGNTLCQAEHIPIHLGSFIG IVPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAEPIFIDGAIAAWTVNLAHHSDFADRGHAHIYQEGLRIPPVR LYRAGELNKDVQDLILLNCQVPHERLSDLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDG TYRFADVFDNPEIDTTLPLSVEVTVKGDAMTLHFDAPDQLRAGINMTHTALQATAYYVVKSVVDPTILPNAGLARPLTVT ARQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHKVTACSNSACTVATFIGQRKDTGAIWVYLETMGGGGGARHD KDGLDGVHVHVTNTSNLPIEALETEYPLTLLRYELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRSWGLDGG GAGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAAVTRDIEEGVIDLPTAREIYGY
Sequences:
>Translated_550_residues MTLKPSLAPSAAPALDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDAAGNTLCQAEHIPIHLGSFIG IVPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAEPIFIDGAIAAWTVNLAHHSDFADRGHAHIYQEGLRIPPVR LYRAGELNKDVQDLILLNCQVPHERLSDLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDG TYRFADVFDNPEIDTTLPLSVEVTVKGDAMTLHFDAPDQLRAGINMTHTALQATAYYVVKSVVDPTILPNAGLARPLTVT ARQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHKVTACSNSACTVATFIGQRKDTGAIWVYLETMGGGGGARHD KDGLDGVHVHVTNTSNLPIEALETEYPLTLLRYELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRSWGLDGG GAGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAAVTRDIEEGVIDLPTAREIYGY >Mature_549_residues TLKPSLAPSAAPALDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDAAGNTLCQAEHIPIHLGSFIGI VPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAEPIFIDGAIAAWTVNLAHHSDFADRGHAHIYQEGLRIPPVRL YRAGELNKDVQDLILLNCQVPHERLSDLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDGT YRFADVFDNPEIDTTLPLSVEVTVKGDAMTLHFDAPDQLRAGINMTHTALQATAYYVVKSVVDPTILPNAGLARPLTVTA RQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHKVTACSNSACTVATFIGQRKDTGAIWVYLETMGGGGGARHDK DGLDGVHVHVTNTSNLPIEALETEYPLTLLRYELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRSWGLDGGG AGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAAVTRDIEEGVIDLPTAREIYGY
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=548, Percent_Identity=32.8467153284672, Blast_Score=189, Evalue=6e-48, Organism=Caenorhabditis elegans, GI133901900, Length=542, Percent_Identity=28.5977859778598, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI133901902, Length=510, Percent_Identity=27.843137254902, Blast_Score=150, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322634, Length=554, Percent_Identity=29.9638989169675, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI45550492, Length=545, Percent_Identity=29.7247706422018, Blast_Score=172, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.9
Molecular weight: Translated: 58598; Mature: 58467
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKPSLAPSAAPALDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH AGNTLCQAEHIPIHLGSFIGIVPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAE CCCCEEECCCCCEEHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCCCCHHHCCC PIFIDGAIAAWTVNLAHHSDFADRGHAHIYQEGLRIPPVRLYRAGELNKDVQDLILLNCQ CEEECCCEEEEEEEEHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHEEEECC VPHERLSDLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCEEECCCC TYRFADVFDNPEIDTTLPLSVEVTVKGDAMTLHFDAPDQLRAGINMTHTALQATAYYVVK CEEEEECCCCCCCCEEECEEEEEEEECCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHH SVVDPTILPNAGLARPLTVTARQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHK HHCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCH VTACSNSACTVATFIGQRKDTGAIWVYLETMGGGGGARHDKDGLDGVHVHVTNTSNLPIE HEECCCCCEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHH ALETEYPLTLLRYELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRSWGLDGG HHCCCCCEEEEEEEEECCCCCCCHHCCCCHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCC GAGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAAVTRDIEEGVID CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC LPTAREIYGY CCCCHHHCCC >Mature Secondary Structure TLKPSLAPSAAPALDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH AGNTLCQAEHIPIHLGSFIGIVPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAE CCCCEEECCCCCEEHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCCCCHHHCCC PIFIDGAIAAWTVNLAHHSDFADRGHAHIYQEGLRIPPVRLYRAGELNKDVQDLILLNCQ CEEECCCEEEEEEEEHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHEEEECC VPHERLSDLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCEEECCCC TYRFADVFDNPEIDTTLPLSVEVTVKGDAMTLHFDAPDQLRAGINMTHTALQATAYYVVK CEEEEECCCCCCCCEEECEEEEEEEECCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHH SVVDPTILPNAGLARPLTVTARQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHK HHCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCH VTACSNSACTVATFIGQRKDTGAIWVYLETMGGGGGARHDKDGLDGVHVHVTNTSNLPIE HEECCCCCEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHH ALETEYPLTLLRYELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRSWGLDGG HHCCCCCEEEEEEEEECCCCCCCHHCCCCHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCC GAGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAAVTRDIEEGVID CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC LPTAREIYGY CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 5-oxo-L-proline; H2O
Specific reaction: ATP + 5-oxo-L-proline + 2 H2O = ADP + phosphate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]