| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424633
Identifier: 158424633
GI number: 158424633
Start: 3441152
End: 3442114
Strand: Reverse
Name: 158424633
Synonym: AZC_3009
Alternate gene names: NA
Gene position: 3442114-3441152 (Counterclockwise)
Preceding gene: 158424636
Following gene: 158424632
Centisome position: 64.1
GC content: 69.68
Gene sequence:
>963_bases ATGACCATCACGAACAGGACGGCGCTGGTGCTGGGCGCCACCGGCGGGGTCGGGGGCGAGACGGCGGCGGCGCTCATCCG CCGGGGGTGGGAGGTGCGTGCCCTCGTGCGCGACCCCGCAAGCGCCGCGCGGCGCTGGCCCTTACCCGACATGGCACCTG TCTGGATCGCTGGCGACGCCATGGATGCCGGCAGCGTCCTGCGCGCGGCGCAGGGCTGTGCGGTGATCGTCCATGGCGTC AACCCGCCCGGCTATCGGGATTGGGAGAAGCTGGTGGTGCCGATGCTGGAAAACACCATCGCCGCCGCCCGCAGCGTTGG CGCGCGGGTGGTACTGCCGGGCACCGTCTACAATTACGGCCCCGATGCCTTTTCTGATCCCCATGAAGCCGCGCCCCAGA ACCCGACGACAAAGAAGGGGCGGCTGCGGGTGGAGATGGAGCAGAGGCTGGCCGTTGCCGCAGCCCAGCGCGTGCCGGTG CTCATCCTGCGCTGCGGCGATTTCTTCGGGCCGCGGACCCGCAACAGCTGGTTCGCGCAGGGCCTTGTGAAGCCGGAGGG GCGTCTCAAGGCCATTGCCGATCCCGGCGCCGGCGCCGGCCATCAATGGGCCTATCTCCCGGATGTCGCGGAAACGATCG TGCGCCTTCTGGAGCGTGACGACCTGCCGACGCTGGCCCGCTTCCATTTCGAAGGCTTCTGGGATGCGGACGGCCGGGGC ATGATCGAGGCGATCCGCGAAGGGGTTGGCCGCGCCGTGCCGGTGAAGGGCTTTCCCTGGTGGCTGCTGCCGCTTGCGGC GCCGTTCAATACCACGCTGCGGGAACTCAAGGAGATGCGCTACCTCTGGCGGGTGCCGCTGCACATGCGCAACACGCAGC TCGTGGCCTTCCTCGGAATGGAGCCGCGCACGCCCCTCCCTCAGGCCGTCCGGGCGACGCTGGCGGGGCTGCACATCTCT TGA
Upstream 100 bases:
>100_bases GAAGGCTCATCAAAAACATACTAGCCATGCGCACGCCTTTGACAATTCTGTCAGACGTCGCGCCGGTGCACTGTGCCGTC ATGAATGGAGGAGTGAGGAC
Downstream 100 bases:
>100_bases ACTGGCACATTTGGTGTGGACCTAAAGGTCAACTGGCCGTGGCAAAAACGATGGTCTAAAGAGCGCGGGAGCTGAGCCGT TACCATCATTCGCTGGGGGC
Product: NAD dependent epimerase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; Sugar Dehydratase/Epimerase; Epimerase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTITNRTALVLGATGGVGGETAAALIRRGWEVRALVRDPASAARRWPLPDMAPVWIAGDAMDAGSVLRAAQGCAVIVHGV NPPGYRDWEKLVVPMLENTIAAARSVGARVVLPGTVYNYGPDAFSDPHEAAPQNPTTKKGRLRVEMEQRLAVAAAQRVPV LILRCGDFFGPRTRNSWFAQGLVKPEGRLKAIADPGAGAGHQWAYLPDVAETIVRLLERDDLPTLARFHFEGFWDADGRG MIEAIREGVGRAVPVKGFPWWLLPLAAPFNTTLRELKEMRYLWRVPLHMRNTQLVAFLGMEPRTPLPQAVRATLAGLHIS
Sequences:
>Translated_320_residues MTITNRTALVLGATGGVGGETAAALIRRGWEVRALVRDPASAARRWPLPDMAPVWIAGDAMDAGSVLRAAQGCAVIVHGV NPPGYRDWEKLVVPMLENTIAAARSVGARVVLPGTVYNYGPDAFSDPHEAAPQNPTTKKGRLRVEMEQRLAVAAAQRVPV LILRCGDFFGPRTRNSWFAQGLVKPEGRLKAIADPGAGAGHQWAYLPDVAETIVRLLERDDLPTLARFHFEGFWDADGRG MIEAIREGVGRAVPVKGFPWWLLPLAAPFNTTLRELKEMRYLWRVPLHMRNTQLVAFLGMEPRTPLPQAVRATLAGLHIS >Mature_319_residues TITNRTALVLGATGGVGGETAAALIRRGWEVRALVRDPASAARRWPLPDMAPVWIAGDAMDAGSVLRAAQGCAVIVHGVN PPGYRDWEKLVVPMLENTIAAARSVGARVVLPGTVYNYGPDAFSDPHEAAPQNPTTKKGRLRVEMEQRLAVAAAQRVPVL ILRCGDFFGPRTRNSWFAQGLVKPEGRLKAIADPGAGAGHQWAYLPDVAETIVRLLERDDLPTLARFHFEGFWDADGRGM IEAIREGVGRAVPVKGFPWWLLPLAAPFNTTLRELKEMRYLWRVPLHMRNTQLVAFLGMEPRTPLPQAVRATLAGLHIS
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34979; Mature: 34848
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITNRTALVLGATGGVGGETAAALIRRGWEVRALVRDPASAARRWPLPDMAPVWIAGDA CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCEEEECCC MDAGSVLRAAQGCAVIVHGVNPPGYRDWEKLVVPMLENTIAAARSVGARVVLPGTVYNYG CCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCC PDAFSDPHEAAPQNPTTKKGRLRVEMEQRLAVAAAQRVPVLILRCGDFFGPRTRNSWFAQ CCCCCCCHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH GLVKPEGRLKAIADPGAGAGHQWAYLPDVAETIVRLLERDDLPTLARFHFEGFWDADGRG CCCCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCH MIEAIREGVGRAVPVKGFPWWLLPLAAPFNTTLRELKEMRYLWRVPLHMRNTQLVAFLGM HHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEECC EPRTPLPQAVRATLAGLHIS CCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TITNRTALVLGATGGVGGETAAALIRRGWEVRALVRDPASAARRWPLPDMAPVWIAGDA CCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCEEEECCC MDAGSVLRAAQGCAVIVHGVNPPGYRDWEKLVVPMLENTIAAARSVGARVVLPGTVYNYG CCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCC PDAFSDPHEAAPQNPTTKKGRLRVEMEQRLAVAAAQRVPVLILRCGDFFGPRTRNSWFAQ CCCCCCCHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH GLVKPEGRLKAIADPGAGAGHQWAYLPDVAETIVRLLERDDLPTLARFHFEGFWDADGRG CCCCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCH MIEAIREGVGRAVPVKGFPWWLLPLAAPFNTTLRELKEMRYLWRVPLHMRNTQLVAFLGM HHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEECC EPRTPLPQAVRATLAGLHIS CCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA