| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is braC [H]
Identifier: 158424624
GI number: 158424624
Start: 3430445
End: 3431665
Strand: Direct
Name: braC [H]
Synonym: AZC_3000
Alternate gene names: 158424624
Gene position: 3430445-3431665 (Clockwise)
Preceding gene: 158424623
Following gene: 158424625
Centisome position: 63.88
GC content: 66.99
Gene sequence:
>1221_bases GTGACCCTCTCCCGCCGCCAGACGCTCGCCGGCCTTGCCGGAGCCCTGCTTCTGCCCGCGCTTTCCCGCGAGGCCCTCGC CCAGACGGCGACCTTCCGCATCGGCGCGCTGAACCCGATCACCGGTGCCGGCGCGCCTTACGGCACCGGCATGCAGAAGA TGATCCTCGCCGCCGCCGAGATGGTGAATGCGGATGGCGGCGCCGGGGGCCGCAAGCTCGAGGTCTCCGCCGAGGACACC CAGACCCAGCCGCAGGCGGCGGTTCTGGCCGCCAAGAAGCTCATCGAGGTCAACAAGGTGCAGGCCATCCTCGGCACCTG GGCCTCGGGCGTTTCGCTGGCCGTCGCCCCGCTCACCAATGACGCCGGCATCCTGCTGATGCACACCTCCGGCGCGCCCG CCCTCTCCGTGCCGCCGGCCAATGCCAAGGGCCTGCTCTACCGCTTCCAGGCAACCAACGACCGCTTCGGCCGCGCCTTC GCGGAGATCGCGCAGAAGGAAGGCTTCAAGCGCCCCGCCACCATGGCCTTCAACAACGCCTCGGGCATCGGCAACACCGA GGGCTTCCGCAAGGCGTGGGAGGCCAAGGGCGGCAAGGTGGTCGAGAACGTCGTCTATGAGCCCAACCAGCCGAGCTATC GCGCGGAGCTGCAGAAGGTGCTGGCGGCGAAGCCCGACGTGATCGTGATGGGCTCCTATCTCGCCGACACCACCATCATC CTGCGCGAGTGGTTCCAGACCGGCGAGACCACCAAATTCATCATTCCCGCCTGGGCCGCCAATCCGGACCTCGTGAAGGC CCTCGGCCCCGAGGTGACGGAAGGCATCATCTCGGTGGACAGCATCTCCAACGAGGGCTCGGACGCCTTCAAGTCGTTCG ATGCGGCCTACCAGAAGGCCATGGGCCAGTCCGGCCTGAACAATGTCTATGCGGCCATGACCTGGGACATGGTGGTGGTG CTGGCCCTCGCCATGGAGGCCGCCGGCCCCAATGCGGACGTTGCCGCCATCTCCGCCAAGCTGCGCGAAGTCGCGGGTCC CGGTGGCAAGACGGTCTCCACCTTCGCCGAAGGCAAGGCGGCGCTGAAGTCCGGCAAGATCGACTACCAGGGCGCCTCCT CCATCCTGGACTTCGACCAGTATGGCGACGTGACCCCGGACTTCGCGGTGTCCTTCATCAACAAGGGCAAGTTCGACCGC AAGTATATCGTGAAGCTCTGA
Upstream 100 bases:
>100_bases GCCAGCACATGCCGCTCATCATGAAGGGCGGCGTCTGCGTGAAGCGTACCGCGCTCAACTGAAAAACAAGCACAACCTCC AGACCGAAGGGATCGAAGCC
Downstream 100 bases:
>100_bases CCACGATCCCGAACGTCGCCGGTCCGTTCTGCCGCCGCTCCTCTCCCTCTCCCCGGGCGGCGGCAGGACCGGGCCGGTGA CGTCCCGCCCGGTCTCCCCG
Product: ABC transporter substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTLSRRQTLAGLAGALLLPALSREALAQTATFRIGALNPITGAGAPYGTGMQKMILAAAEMVNADGGAGGRKLEVSAEDT QTQPQAAVLAAKKLIEVNKVQAILGTWASGVSLAVAPLTNDAGILLMHTSGAPALSVPPANAKGLLYRFQATNDRFGRAF AEIAQKEGFKRPATMAFNNASGIGNTEGFRKAWEAKGGKVVENVVYEPNQPSYRAELQKVLAAKPDVIVMGSYLADTTII LREWFQTGETTKFIIPAWAANPDLVKALGPEVTEGIISVDSISNEGSDAFKSFDAAYQKAMGQSGLNNVYAAMTWDMVVV LALAMEAAGPNADVAAISAKLREVAGPGGKTVSTFAEGKAALKSGKIDYQGASSILDFDQYGDVTPDFAVSFINKGKFDR KYIVKL
Sequences:
>Translated_406_residues MTLSRRQTLAGLAGALLLPALSREALAQTATFRIGALNPITGAGAPYGTGMQKMILAAAEMVNADGGAGGRKLEVSAEDT QTQPQAAVLAAKKLIEVNKVQAILGTWASGVSLAVAPLTNDAGILLMHTSGAPALSVPPANAKGLLYRFQATNDRFGRAF AEIAQKEGFKRPATMAFNNASGIGNTEGFRKAWEAKGGKVVENVVYEPNQPSYRAELQKVLAAKPDVIVMGSYLADTTII LREWFQTGETTKFIIPAWAANPDLVKALGPEVTEGIISVDSISNEGSDAFKSFDAAYQKAMGQSGLNNVYAAMTWDMVVV LALAMEAAGPNADVAAISAKLREVAGPGGKTVSTFAEGKAALKSGKIDYQGASSILDFDQYGDVTPDFAVSFINKGKFDR KYIVKL >Mature_405_residues TLSRRQTLAGLAGALLLPALSREALAQTATFRIGALNPITGAGAPYGTGMQKMILAAAEMVNADGGAGGRKLEVSAEDTQ TQPQAAVLAAKKLIEVNKVQAILGTWASGVSLAVAPLTNDAGILLMHTSGAPALSVPPANAKGLLYRFQATNDRFGRAFA EIAQKEGFKRPATMAFNNASGIGNTEGFRKAWEAKGGKVVENVVYEPNQPSYRAELQKVLAAKPDVIVMGSYLADTTIIL REWFQTGETTKFIIPAWAANPDLVKALGPEVTEGIISVDSISNEGSDAFKSFDAAYQKAMGQSGLNNVYAAMTWDMVVVL ALAMEAAGPNADVAAISAKLREVAGPGGKTVSTFAEGKAALKSGKIDYQGASSILDFDQYGDVTPDFAVSFINKGKFDRK YIVKL
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42685; Mature: 42554
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRRQTLAGLAGALLLPALSREALAQTATFRIGALNPITGAGAPYGTGMQKMILAAAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHH MVNADGGAGGRKLEVSAEDTQTQPQAAVLAAKKLIEVNKVQAILGTWASGVSLAVAPLTN HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DAGILLMHTSGAPALSVPPANAKGLLYRFQATNDRFGRAFAEIAQKEGFKRPATMAFNNA CCCEEEEECCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCC SGIGNTEGFRKAWEAKGGKVVENVVYEPNQPSYRAELQKVLAAKPDVIVMGSYLADTTII CCCCCCHHHHHHHHCCCCCEEHHHEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHH LREWFQTGETTKFIIPAWAANPDLVKALGPEVTEGIISVDSISNEGSDAFKSFDAAYQKA HHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHH MGQSGLNNVYAAMTWDMVVVLALAMEAAGPNADVAAISAKLREVAGPGGKTVSTFAEGKA HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH ALKSGKIDYQGASSILDFDQYGDVTPDFAVSFINKGKFDRKYIVKL HHHCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure TLSRRQTLAGLAGALLLPALSREALAQTATFRIGALNPITGAGAPYGTGMQKMILAAAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHH MVNADGGAGGRKLEVSAEDTQTQPQAAVLAAKKLIEVNKVQAILGTWASGVSLAVAPLTN HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DAGILLMHTSGAPALSVPPANAKGLLYRFQATNDRFGRAFAEIAQKEGFKRPATMAFNNA CCCEEEEECCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCC SGIGNTEGFRKAWEAKGGKVVENVVYEPNQPSYRAELQKVLAAKPDVIVMGSYLADTTII CCCCCCHHHHHHHHCCCCCEEHHHEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHH LREWFQTGETTKFIIPAWAANPDLVKALGPEVTEGIISVDSISNEGSDAFKSFDAAYQKA HHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHH MGQSGLNNVYAAMTWDMVVVLALAMEAAGPNADVAAISAKLREVAGPGGKTVSTFAEGKA HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH ALKSGKIDYQGASSILDFDQYGDVTPDFAVSFINKGKFDRKYIVKL HHHCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]