| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cutL [H]
Identifier: 158424562
GI number: 158424562
Start: 3359159
End: 3361564
Strand: Reverse
Name: cutL [H]
Synonym: AZC_2938
Alternate gene names: 158424562
Gene position: 3361564-3359159 (Counterclockwise)
Preceding gene: 158424563
Following gene: 158424561
Centisome position: 62.6
GC content: 67.29
Gene sequence:
>2406_bases TTGGGACACCCATTCGGGGAGGAACCCATGAACGCCAGCAACGTCACGCCCCTCGGCGCGCCCGTCCGCCGCAAGGAAGA CCACCGCTTCATCACCGGCAAGGGCCGCTATACGGACGACATGAACCGGCCGGGGCAGGCGCACGCCTATTTCCTGCGCT CGCCGCATGCCCATGCCCGCATCCGCGGCATCGACATTTCTGCCGCCTCTGCCATGCCGGGCGTCGTCGCCATCCTCACG GGCGCGGATCTGGCGCAGGACGGGGTGGGCGACCTCATCTGCGGCTGGATGATCCATTCCGTGGACGGCACGCCCATGCG CATGGGCTCTCATCCGTCGCTCGCCAAGGAGAAGGTGCGCTACGTGGGCGACCATGTGGCGGTGGTGATCGCGGAAACCT TCAATCAGGCCAAGGACGCCGCCGCGGCCGTCGCGGTGGATTACGAGGTGCTGCCGGCGGTGGCGGACACGGGCGCCGCC CGCGCGGCCGGTGCGCCGCAGGTGCATGAGGTGGCGCCCGGCAATACGGTCTTCTCCTGGGAACTGGGCGACAAGGCCGC CACCGATACCGCCTTCGGGCAGGCGGCCCATGTGGTGCGCCTCGATCTCGTCAACAATCGTCTGGCGCCCAACCCCATCG AGCCGCGCGCCGCCATCGGCGAATATGACAGCGGCGACGAGGCCTATACGCTCTGGACCACGAGCCAGAACCCGCATGTG GCCCGCCTCGTGCTCTCAGCCTTCGTCGGCATCGCGCCGGAGAACAAGCTGCGCGTCATCGCCCCGGACGTGGGCGGCGG CTTCGGCTCCAAGATCTTCATTTATGCGGAAGAGACGGTCTGCGTCTGGGCCGCCAAGCGCGTGGGGCGTCCGGTAAAAT GGACGTCGGACCGGTCCGAGGCCTTCCTCTCCGATGCCCATGGGCGCGACCACATCACCCATGCGGAACTGGCGCTGGAC GCGGAGGGGCACATTCTCGGATTCCGGGTCGAGACGACGGCCAACATGGGCGCCTATCTCTCCACTTTCGCCTCGGCCAT CCCGACCTATCTCTACGCGACCCTGCTCTCCGGCCAGTACGCCATGCCGGCCATCCATTGCCATGTGGATGCGGTCTATA CGAACACGGCGCCCGTGGACGCCTATCGCGGGGCAGGGCGCCCGGAAGCGACCTTCCTGGTGGAGCGCATCGTGGAGATC GCCGCGCGCACGCTCGGCATCGACAGCGCCGAGTTTCGGCGGCGCAACTTCGTGCGGAGCTTCCCGCACCAGACGCCGGT CATCATGAATTATGACGCCGGCGACTATTTCGCCTCCCTCGACAAGGCGCTGGAGCTTGCCGACTACGCCGGTTTCCCCG CTCGCAAGGCGGAGGCCGCGCGCCGCGGCAAGCTGCGGGGCATCGGCCTGTCCAATTACATCGAGGCCTGCGGCATTGCC CCGTCGGCGGCGGTGGGCTCGCTCGGGGCCGGCGTCGGCCTCTGGGAAAGCGCGGAGGTACGGGTGAACCCCACCGGAAA TGTGGAGGTGCTCACCGGCTCCCACAGCCACGGGCAGGGGCACGAGACCACCTTCGCCCAGCTGGTGTCCGCCCGCCTCG GCATTCCCATCGAGCAGGTGACCATCGTCCATGGCGACACCGACAAGGTGCAGTTCGGCATGGGCACCTATGGCTCCCGC TCGGGGGCGGTGGGCATGTCGGCCATCGTGAAGGCGCTGGACAAGGTGGAGGCCAAGGCGAAGAAGATTGCCGCCCATAT TCTCGAGGCCTCGGAAGGGGACATCGAGTTCAAGGACGGACGGTTCAGCGTGGCCGGCACCGACCGGGGCCTTGCCTTCG CGGAAGTGGCACTGAACGCTTATGTGGCGCACAAATTCCCCACCTCCGAGATCGAACCGGGGCTGAAGGAGGGGGCCTTC TATGACCCCACCAACTTCACCTTCCCCGCTGGCTGTCACGTCTGCGAACTGGAGGTGGACCCGGACACCGGCGTCACGGA AATCGTGAATTTCGTGGCGGTGGATGATTTCGGCGTGGTCATCAATCCCATGATCGTCGAGGGGCAGGTGCATGGCGGCA TTGCCCAGGGCGTCGGGCAGGCGCTCCTGGAAGCCGTGCATTATGATGCGGACGGCCAGCTCGTGACGGGCTCCTTCATG GACTACACCATGCCGCGCGCAGCCAATCTGCCGTCCTTCCGCGTCGGGCTCACCGAGACGCGCTGCCCCTCCAATCCGCT GGGGATCAAGGGCTGCGGCGAAGCCGGTGCCATCGCCGCCCCGCCGGCGGTCATCAATGCTCTCACCCATGCCCTCGGCA CCGAGGACGTGCCCATGCCCGCGACACCGGCCAAGGTCTGGAAGATCATCCGGGACCTGCCGGCAGCCGCACAGGCGGCG GAGTGA
Upstream 100 bases:
>100_bases CTCCTGATCCATTGCACAGCATTCTTCTGCCCGCCCGTGGCGGCAGCATCCGCTCATCCGGACAGCCTCAACAAACGGCG CCGGAGCCCGTGCATTCCCT
Downstream 100 bases:
>100_bases TCCGCCCGCATCCACCGCGGCGGATCGGGGCAGGCCACGCCTGGCCTGCCCTTCGACCTCGCCTTTTCCCTTGAACAGGG CCCGTCCTGCGGCTTGGATT
Product: carbon-monoxide dehydrogenase large subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MGHPFGEEPMNASNVTPLGAPVRRKEDHRFITGKGRYTDDMNRPGQAHAYFLRSPHAHARIRGIDISAASAMPGVVAILT GADLAQDGVGDLICGWMIHSVDGTPMRMGSHPSLAKEKVRYVGDHVAVVIAETFNQAKDAAAAVAVDYEVLPAVADTGAA RAAGAPQVHEVAPGNTVFSWELGDKAATDTAFGQAAHVVRLDLVNNRLAPNPIEPRAAIGEYDSGDEAYTLWTTSQNPHV ARLVLSAFVGIAPENKLRVIAPDVGGGFGSKIFIYAEETVCVWAAKRVGRPVKWTSDRSEAFLSDAHGRDHITHAELALD AEGHILGFRVETTANMGAYLSTFASAIPTYLYATLLSGQYAMPAIHCHVDAVYTNTAPVDAYRGAGRPEATFLVERIVEI AARTLGIDSAEFRRRNFVRSFPHQTPVIMNYDAGDYFASLDKALELADYAGFPARKAEAARRGKLRGIGLSNYIEACGIA PSAAVGSLGAGVGLWESAEVRVNPTGNVEVLTGSHSHGQGHETTFAQLVSARLGIPIEQVTIVHGDTDKVQFGMGTYGSR SGAVGMSAIVKALDKVEAKAKKIAAHILEASEGDIEFKDGRFSVAGTDRGLAFAEVALNAYVAHKFPTSEIEPGLKEGAF YDPTNFTFPAGCHVCELEVDPDTGVTEIVNFVAVDDFGVVINPMIVEGQVHGGIAQGVGQALLEAVHYDADGQLVTGSFM DYTMPRAANLPSFRVGLTETRCPSNPLGIKGCGEAGAIAAPPAVINALTHALGTEDVPMPATPAKVWKIIRDLPAAAQAA E
Sequences:
>Translated_801_residues MGHPFGEEPMNASNVTPLGAPVRRKEDHRFITGKGRYTDDMNRPGQAHAYFLRSPHAHARIRGIDISAASAMPGVVAILT GADLAQDGVGDLICGWMIHSVDGTPMRMGSHPSLAKEKVRYVGDHVAVVIAETFNQAKDAAAAVAVDYEVLPAVADTGAA RAAGAPQVHEVAPGNTVFSWELGDKAATDTAFGQAAHVVRLDLVNNRLAPNPIEPRAAIGEYDSGDEAYTLWTTSQNPHV ARLVLSAFVGIAPENKLRVIAPDVGGGFGSKIFIYAEETVCVWAAKRVGRPVKWTSDRSEAFLSDAHGRDHITHAELALD AEGHILGFRVETTANMGAYLSTFASAIPTYLYATLLSGQYAMPAIHCHVDAVYTNTAPVDAYRGAGRPEATFLVERIVEI AARTLGIDSAEFRRRNFVRSFPHQTPVIMNYDAGDYFASLDKALELADYAGFPARKAEAARRGKLRGIGLSNYIEACGIA PSAAVGSLGAGVGLWESAEVRVNPTGNVEVLTGSHSHGQGHETTFAQLVSARLGIPIEQVTIVHGDTDKVQFGMGTYGSR SGAVGMSAIVKALDKVEAKAKKIAAHILEASEGDIEFKDGRFSVAGTDRGLAFAEVALNAYVAHKFPTSEIEPGLKEGAF YDPTNFTFPAGCHVCELEVDPDTGVTEIVNFVAVDDFGVVINPMIVEGQVHGGIAQGVGQALLEAVHYDADGQLVTGSFM DYTMPRAANLPSFRVGLTETRCPSNPLGIKGCGEAGAIAAPPAVINALTHALGTEDVPMPATPAKVWKIIRDLPAAAQAA E >Mature_800_residues GHPFGEEPMNASNVTPLGAPVRRKEDHRFITGKGRYTDDMNRPGQAHAYFLRSPHAHARIRGIDISAASAMPGVVAILTG ADLAQDGVGDLICGWMIHSVDGTPMRMGSHPSLAKEKVRYVGDHVAVVIAETFNQAKDAAAAVAVDYEVLPAVADTGAAR AAGAPQVHEVAPGNTVFSWELGDKAATDTAFGQAAHVVRLDLVNNRLAPNPIEPRAAIGEYDSGDEAYTLWTTSQNPHVA RLVLSAFVGIAPENKLRVIAPDVGGGFGSKIFIYAEETVCVWAAKRVGRPVKWTSDRSEAFLSDAHGRDHITHAELALDA EGHILGFRVETTANMGAYLSTFASAIPTYLYATLLSGQYAMPAIHCHVDAVYTNTAPVDAYRGAGRPEATFLVERIVEIA ARTLGIDSAEFRRRNFVRSFPHQTPVIMNYDAGDYFASLDKALELADYAGFPARKAEAARRGKLRGIGLSNYIEACGIAP SAAVGSLGAGVGLWESAEVRVNPTGNVEVLTGSHSHGQGHETTFAQLVSARLGIPIEQVTIVHGDTDKVQFGMGTYGSRS GAVGMSAIVKALDKVEAKAKKIAAHILEASEGDIEFKDGRFSVAGTDRGLAFAEVALNAYVAHKFPTSEIEPGLKEGAFY DPTNFTFPAGCHVCELEVDPDTGVTEIVNFVAVDDFGVVINPMIVEGQVHGGIAQGVGQALLEAVHYDADGQLVTGSFMD YTMPRAANLPSFRVGLTETRCPSNPLGIKGCGEAGAIAAPPAVINALTHALGTEDVPMPATPAKVWKIIRDLPAAAQAAE
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=751, Percent_Identity=25.5659121171771, Blast_Score=157, Evalue=4e-38, Organism=Homo sapiens, GI91823271, Length=781, Percent_Identity=24.8399487836108, Blast_Score=146, Evalue=6e-35, Organism=Escherichia coli, GI1789230, Length=773, Percent_Identity=28.4605433376455, Blast_Score=246, Evalue=3e-66, Organism=Escherichia coli, GI1789246, Length=829, Percent_Identity=25.8142340168878, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1786478, Length=810, Percent_Identity=26.4197530864197, Blast_Score=137, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17540638, Length=779, Percent_Identity=25.0320924261874, Blast_Score=143, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17539860, Length=740, Percent_Identity=24.1891891891892, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI32566215, Length=583, Percent_Identity=25.3859348198971, Blast_Score=109, Evalue=6e-24, Organism=Drosophila melanogaster, GI17737937, Length=772, Percent_Identity=26.0362694300518, Blast_Score=132, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84825; Mature: 84693
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHPFGEEPMNASNVTPLGAPVRRKEDHRFITGKGRYTDDMNRPGQAHAYFLRSPHAHAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEE IRGIDISAASAMPGVVAILTGADLAQDGVGDLICGWMIHSVDGTPMRMGSHPSLAKEKVR EEEEEEECCCCCCCEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHH YVGDHVAVVIAETFNQAKDAAAAVAVDYEVLPAVADTGAARAAGAPQVHEVAPGNTVFSW HHCCCEEEEEEHHHHHHHHHHEEEEECHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEE ELGDKAATDTAFGQAAHVVRLDLVNNRLAPNPIEPRAAIGEYDSGDEAYTLWTTSQNPHV ECCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCHH ARLVLSAFVGIAPENKLRVIAPDVGGGFGSKIFIYAEETVCVWAAKRVGRPVKWTSDRSE HHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEHHHCCCCCEECCCHHH AFLSDAHGRDHITHAELALDAEGHILGFRVETTANMGAYLSTFASAIPTYLYATLLSGQY HHHHCCCCCCCCEEEHEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC AMPAIHCHVDAVYTNTAPVDAYRGAGRPEATFLVERIVEIAARTLGIDSAEFRRRNFVRS CCCEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FPHQTPVIMNYDAGDYFASLDKALELADYAGFPARKAEAARRGKLRGIGLSNYIEACGIA CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHHHHCCC PSAAVGSLGAGVGLWESAEVRVNPTGNVEVLTGSHSHGQGHETTFAQLVSARLGIPIEQV CCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE TIVHGDTDKVQFGMGTYGSRSGAVGMSAIVKALDKVEAKAKKIAAHILEASEGDIEFKDG EEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RFSVAGTDRGLAFAEVALNAYVAHKFPTSEIEPGLKEGAFYDPTNFTFPAGCHVCELEVD EEEEECCCCCHHHHHHHHHHHHHCCCCCHHCCCCHHCCCEECCCCCCCCCCCEEEEEEEC PDTGVTEIVNFVAVDDFGVVINPMIVEGQVHGGIAQGVGQALLEAVHYDADGQLVTGSFM CCCCHHHHHHHHEECCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCHH DYTMPRAANLPSFRVGLTETRCPSNPLGIKGCGEAGAIAAPPAVINALTHALGTEDVPMP HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC ATPAKVWKIIRDLPAAAQAAE CCHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure GHPFGEEPMNASNVTPLGAPVRRKEDHRFITGKGRYTDDMNRPGQAHAYFLRSPHAHAR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEE IRGIDISAASAMPGVVAILTGADLAQDGVGDLICGWMIHSVDGTPMRMGSHPSLAKEKVR EEEEEEECCCCCCCEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHH YVGDHVAVVIAETFNQAKDAAAAVAVDYEVLPAVADTGAARAAGAPQVHEVAPGNTVFSW HHCCCEEEEEEHHHHHHHHHHEEEEECHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEE ELGDKAATDTAFGQAAHVVRLDLVNNRLAPNPIEPRAAIGEYDSGDEAYTLWTTSQNPHV ECCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCHH ARLVLSAFVGIAPENKLRVIAPDVGGGFGSKIFIYAEETVCVWAAKRVGRPVKWTSDRSE HHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEHHHCCCCCEECCCHHH AFLSDAHGRDHITHAELALDAEGHILGFRVETTANMGAYLSTFASAIPTYLYATLLSGQY HHHHCCCCCCCCEEEHEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC AMPAIHCHVDAVYTNTAPVDAYRGAGRPEATFLVERIVEIAARTLGIDSAEFRRRNFVRS CCCEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FPHQTPVIMNYDAGDYFASLDKALELADYAGFPARKAEAARRGKLRGIGLSNYIEACGIA CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHHHHCCC PSAAVGSLGAGVGLWESAEVRVNPTGNVEVLTGSHSHGQGHETTFAQLVSARLGIPIEQV CCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE TIVHGDTDKVQFGMGTYGSRSGAVGMSAIVKALDKVEAKAKKIAAHILEASEGDIEFKDG EEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RFSVAGTDRGLAFAEVALNAYVAHKFPTSEIEPGLKEGAFYDPTNFTFPAGCHVCELEVD EEEEECCCCCHHHHHHHHHHHHHCCCCCHHCCCCHHCCCEECCCCCCCCCCCEEEEEEEC PDTGVTEIVNFVAVDDFGVVINPMIVEGQVHGGIAQGVGQALLEAVHYDADGQLVTGSFM CCCCHHHHHHHHEECCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCHH DYTMPRAANLPSFRVGLTETRCPSNPLGIKGCGEAGAIAAPPAVINALTHALGTEDVPMP HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC ATPAKVWKIIRDLPAAAQAAE CCHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]