| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cutM [H]
Identifier: 158424561
GI number: 158424561
Start: 3358218
End: 3359060
Strand: Reverse
Name: cutM [H]
Synonym: AZC_2937
Alternate gene names: 158424561
Gene position: 3359060-3358218 (Counterclockwise)
Preceding gene: 158424562
Following gene: 158424560
Centisome position: 62.55
GC content: 68.45
Gene sequence:
>843_bases TTGCCAGACATCGAAGCCGGACGTGCTTCAGGAGATCAGACCATGTACGCGTTTGATTATCAGCGCCCCGCCGCCCTTGA CGACGCCATCGGCCTCCTGCGTTCGGTGAACGAGCCCAAGGTTCTTGCGGGCGGCCAGACCCTGCTGCCGACCCTCAAGC AGCGCCTCGCGCAGCCGGGCACGCTGGTGGACCTCTCCCGCATTCCCGGCCTGTCCCGCATTGAGCGTCAGGGCGAAGGC CTCGTCATCGGCGCCATGGCGCGCCATGCGGAAGTGGCGACCTCCGCTCTTGTGAAGAGCGTCATTCCCGCGCTGGCGGA ACTCGCCGGCGTGATCGGCGACCCGGCCGTGCGCAATCGCGGCACGCTCGGGGGCTCCATCGCCAACAACGATCCCACGG CGGATTATCCCGCCGGCTGCCTCGGCCTCGGCGCCACCATCCTCACCAGCAAGCGGGCACTGGCGGCGGACGACTTCTTC ACCGGCCTCTTCGAGACCGCGCTGGAGGACGACGAACTGGTGGTGGGCGTGGAGTTTCCTGCGCCGGCGCGCGCCGGCTA CGCCAAGTTCCGCAATCCCGCTTCCCGCTACGCCATGGCGGGCGTCTTCGTGGCGCAGGGCGCCGAGGGCGTGCGCGTGG CCGTCACCGGGGCGGGGCAGGGCGGCGTATTCCGCTGGAGCGAGGCGGAAGAGGCACTCGCCGCCGACTTCCGTCCGGAG GCTCTGGACGGCCTTTCCGTAGATTCTGCCGACATGATGTCGGACCTCCACGGCAGTGCCGACTATCGGGCTCATCTGGT TAAAGTGATGGCCCGGCGCGCGGTGGTTGCATCTATGGGGTAG
Upstream 100 bases:
>100_bases GATCCGCCCGCATCCACCGCGGCGGATCGGGGCAGGCCACGCCTGGCCTGCCCTTCGACCTCGCCTTTTCCCTTGAACAG GGCCCGTCCTGCGGCTTGGA
Downstream 100 bases:
>100_bases CTTGGTAGGTAATGACTGGCTAAGGTCATGTATACCAGCTAAATTTGTTAAAAAATCGTGGTTTTATTCCACTAATGCGT CATATGGTTCCCTTCGCGCC
Product: carbon monoxide dehydrogenase medium subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPDIEAGRASGDQTMYAFDYQRPAALDDAIGLLRSVNEPKVLAGGQTLLPTLKQRLAQPGTLVDLSRIPGLSRIERQGEG LVIGAMARHAEVATSALVKSVIPALAELAGVIGDPAVRNRGTLGGSIANNDPTADYPAGCLGLGATILTSKRALAADDFF TGLFETALEDDELVVGVEFPAPARAGYAKFRNPASRYAMAGVFVAQGAEGVRVAVTGAGQGGVFRWSEAEEALAADFRPE ALDGLSVDSADMMSDLHGSADYRAHLVKVMARRAVVASMG
Sequences:
>Translated_280_residues MPDIEAGRASGDQTMYAFDYQRPAALDDAIGLLRSVNEPKVLAGGQTLLPTLKQRLAQPGTLVDLSRIPGLSRIERQGEG LVIGAMARHAEVATSALVKSVIPALAELAGVIGDPAVRNRGTLGGSIANNDPTADYPAGCLGLGATILTSKRALAADDFF TGLFETALEDDELVVGVEFPAPARAGYAKFRNPASRYAMAGVFVAQGAEGVRVAVTGAGQGGVFRWSEAEEALAADFRPE ALDGLSVDSADMMSDLHGSADYRAHLVKVMARRAVVASMG >Mature_279_residues PDIEAGRASGDQTMYAFDYQRPAALDDAIGLLRSVNEPKVLAGGQTLLPTLKQRLAQPGTLVDLSRIPGLSRIERQGEGL VIGAMARHAEVATSALVKSVIPALAELAGVIGDPAVRNRGTLGGSIANNDPTADYPAGCLGLGATILTSKRALAADDFFT GLFETALEDDELVVGVEFPAPARAGYAKFRNPASRYAMAGVFVAQGAEGVRVAVTGAGQGGVFRWSEAEEALAADFRPEA LDGLSVDSADMMSDLHGSADYRAHLVKVMARRAVVASMG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=284, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 29139; Mature: 29008
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIEAGRASGDQTMYAFDYQRPAALDDAIGLLRSVNEPKVLAGGQTLLPTLKQRLAQPG CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCC TLVDLSRIPGLSRIERQGEGLVIGAMARHAEVATSALVKSVIPALAELAGVIGDPAVRNR CEEEHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTLGGSIANNDPTADYPAGCLGLGATILTSKRALAADDFFTGLFETALEDDELVVGVEFP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC APARAGYAKFRNPASRYAMAGVFVAQGAEGVRVAVTGAGQGGVFRWSEAEEALAADFRPE CCCHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEECCHHHHHHHHCCCCH ALDGLSVDSADMMSDLHGSADYRAHLVKVMARRAVVASMG HHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDIEAGRASGDQTMYAFDYQRPAALDDAIGLLRSVNEPKVLAGGQTLLPTLKQRLAQPG CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCC TLVDLSRIPGLSRIERQGEGLVIGAMARHAEVATSALVKSVIPALAELAGVIGDPAVRNR CEEEHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTLGGSIANNDPTADYPAGCLGLGATILTSKRALAADDFFTGLFETALEDDELVVGVEFP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC APARAGYAKFRNPASRYAMAGVFVAQGAEGVRVAVTGAGQGGVFRWSEAEEALAADFRPE CCCHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEECCHHHHHHHHCCCCH ALDGLSVDSADMMSDLHGSADYRAHLVKVMARRAVVASMG HHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]