| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is chiA [H]
Identifier: 158424525
GI number: 158424525
Start: 3311403
End: 3313634
Strand: Reverse
Name: chiA [H]
Synonym: AZC_2901
Alternate gene names: 158424525
Gene position: 3313634-3311403 (Counterclockwise)
Preceding gene: 158424527
Following gene: 158424524
Centisome position: 61.71
GC content: 66.8
Gene sequence:
>2232_bases ATGGCTAAGACCACGACGATCACTTGGTCCTGGGGCACGAACAGCGTGATCGCCTTCGATCCCGCGTCGGACATCCTGGA TTTCGGATGGTTCCAGGCGGGCCAGTTCACCGTCTCCGAGGTGAACGGGTCGGTGGTGATCTCCATTCCCACCAACAACC AGACTTACACGCTGACGGGCGTCACGCTGTCGGAACTCTCGCTCTCGAACATCCTCGCCAAGGACAGCGGCGCGGTCACC GAGTGGACTACGGCGCTGGGAGGGGCTTCGGCCGGCTCCGGCGGTTCCTCGGGCGGCGCAACGTCCGGGGGCGCAACGTC CGGCGGCACCAGCACGGGTGGCAGCGCCGGCGGCTCGCCCGCCTCCGGCACCACGGATGGAGGCACCTCCGGCTCGTCGG GTGGCGCCGGCCATGTCGGCGATGGTCTTGCCACCGTGACCACCATTTCCTGGGCCTGGGGCACCCACACGGCGTTGAAT TTCGACACCGCGCTGGACAAGCTCGATTTCGGCTGGCTCTCCGCCGACAATTTCACCGTCTCCGAGGTGAATGGCTCCGT GGTCATCGCCATTCCCTCGAACAGCCAGACCTATACGCTAACCGGCGTCACGCTCTCCGAACTCTCGCTCGCCAACATCG TGGCCAAGGACGGCTCCGCGCTGGCGGAATGGACGACGGCGCTGTCCGGCCACAGCGGCGGCAGCTCAGGCACGTCGGGC GGCTCCACGGGCGGCTCGACCAGCGGTGGCGGCAGTTCCTCGGCCGGCGGCTCGACCTCGACGGGCGGTGGCTCGACGGG CGGTGGTTCGACGGGTGGCAGCAGCACCGGCGGCAGCACAGGAGGCACATCCGGCGGCGGAACGTCCGGGGGGGATGCCG CCCTTTATGCGGAGGCCTGGAGCGCCTCCAAGGTCTATCAGGGCGGCGACCATGCCGCGGTCGGCAACAATGTCTATGAA GCGCATTGGTGGACGCAGGGCACCGATCCGAGCACCCATAACGGCGGCGACGGATCGGGACAGGTGTGGACGCTGGTCGG CCATCTCGACACCACGACGGTGGTGCCGAACGCCCCGGCGGACCTGTTCGCCACCAATGTGTCGGACACCTCGGCCCTGC TGGTCTGGGACAAGGCGGTCATCAACGGCGCTGGCACCGTCTCGGCCTATGAGATCTACGAGAACGGCACGCTGGTCGGC ACCACCAGCGGCACGTCCTACAAGGTGACGGGCCTCGGCGCGTCCACCGCTTACAGCTTCACCGTGGTGGCGGTGGACGA GGCCGGGCACTCCCCGGCGGCGGTCCCGATCTCCGTGACGACCGATCCGGTCCACACCTCGACGCTGGAGCAGACCTACT CGCCCTACATCGACATGTCGCTGTCGACGAGCCAGGATCTTCTCTCCATCGCCAAGGCGTCCGGCGTCACCGACTTCACG CTCGCCTTCGTGCTGAGCTCCGGCACGGACACGCTGGGCTGGGGCGGTGTCGGCACGCTGGGCAACGACACGCTGCCCAG CGGTTCGTCGATCCACGATCAGGTGGCCGCCGTTCAGGCCATCGGCGGGGACATCACCATTTCCTTCGGCGGCGCCAACG GCCAGGAAGCGGCGCTCACCTTCTCCAGCGCCACCAAGCTCACCGCCGCCTACCAGTCGGTGCTGGACACCTATCATGTG AACAAGATCGATTTCGACATCGAGGGCGGCGCCATCGCCAACACCTCCGCCAACCACCTCCGCGATCAGGCCTTGGTCGC GCTGGAGGCGGCCAATCCCGATCTCAAGGTCTCCTTCACGCTGCCGGTGCTGCCCACGGGGCTCACCAATGACGGGCTCA ACCTGCTGAAGCAGGCCCTGACGGACGGCGTGCATATCGACACCGTCAACATCATGGCGATGGATTACGGCGCTTCCGTC GACAGTGGCGACATGGGCACCGACGCCATCTCCGCCGCGCAGGCGACGCTCGCCCAGATGCACACGCTGGGTCTCGACGC CAAGCTCGGGGTCACGGTGATGGTCGGCATGAACGACGTGCAGAGCGAGGTGTTCACCCTCAGCGACGCCCAGCAACTGC TGGATTATGCGCAGGGCAATGAAGACATCTCCGGCCTGTCCATCTGGTCGGTCGGACGGGACAACGGCAGCACGGTCGGC ACCGTCTCGCCCCTCGGGAGCGGAATCCAGCAGACGGCCTACGAGTTCAGCCACATCTTCGGTCACATCTGA
Upstream 100 bases:
>100_bases TGCCACAAACGCATTGGACACCGCCCGCGAGCACCCATCAAGCTACCGTTCGCGTCCGTGCCGTCGGACGTAAGGGTAAT GCGGCAACGATGGGTGGACG
Downstream 100 bases:
>100_bases GCCGGACCGCCCCGCGTCCGCGCGGGGCGTCTTTCTCGCGACGGCACAGGTCTTTTTCGCCCCCGGCGGAGTTCCGCTCT CAGGCGAACGCCTTTAACGT
Product: type III fibronectin
Products: NA
Alternate protein names: Chitinase; Lysozyme [H]
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MAKTTTITWSWGTNSVIAFDPASDILDFGWFQAGQFTVSEVNGSVVISIPTNNQTYTLTGVTLSELSLSNILAKDSGAVT EWTTALGGASAGSGGSSGGATSGGATSGGTSTGGSAGGSPASGTTDGGTSGSSGGAGHVGDGLATVTTISWAWGTHTALN FDTALDKLDFGWLSADNFTVSEVNGSVVIAIPSNSQTYTLTGVTLSELSLANIVAKDGSALAEWTTALSGHSGGSSGTSG GSTGGSTSGGGSSSAGGSTSTGGGSTGGGSTGGSSTGGSTGGTSGGGTSGGDAALYAEAWSASKVYQGGDHAAVGNNVYE AHWWTQGTDPSTHNGGDGSGQVWTLVGHLDTTTVVPNAPADLFATNVSDTSALLVWDKAVINGAGTVSAYEIYENGTLVG TTSGTSYKVTGLGASTAYSFTVVAVDEAGHSPAAVPISVTTDPVHTSTLEQTYSPYIDMSLSTSQDLLSIAKASGVTDFT LAFVLSSGTDTLGWGGVGTLGNDTLPSGSSIHDQVAAVQAIGGDITISFGGANGQEAALTFSSATKLTAAYQSVLDTYHV NKIDFDIEGGAIANTSANHLRDQALVALEAANPDLKVSFTLPVLPTGLTNDGLNLLKQALTDGVHIDTVNIMAMDYGASV DSGDMGTDAISAAQATLAQMHTLGLDAKLGVTVMVGMNDVQSEVFTLSDAQQLLDYAQGNEDISGLSIWSVGRDNGSTVG TVSPLGSGIQQTAYEFSHIFGHI
Sequences:
>Translated_743_residues MAKTTTITWSWGTNSVIAFDPASDILDFGWFQAGQFTVSEVNGSVVISIPTNNQTYTLTGVTLSELSLSNILAKDSGAVT EWTTALGGASAGSGGSSGGATSGGATSGGTSTGGSAGGSPASGTTDGGTSGSSGGAGHVGDGLATVTTISWAWGTHTALN FDTALDKLDFGWLSADNFTVSEVNGSVVIAIPSNSQTYTLTGVTLSELSLANIVAKDGSALAEWTTALSGHSGGSSGTSG GSTGGSTSGGGSSSAGGSTSTGGGSTGGGSTGGSSTGGSTGGTSGGGTSGGDAALYAEAWSASKVYQGGDHAAVGNNVYE AHWWTQGTDPSTHNGGDGSGQVWTLVGHLDTTTVVPNAPADLFATNVSDTSALLVWDKAVINGAGTVSAYEIYENGTLVG TTSGTSYKVTGLGASTAYSFTVVAVDEAGHSPAAVPISVTTDPVHTSTLEQTYSPYIDMSLSTSQDLLSIAKASGVTDFT LAFVLSSGTDTLGWGGVGTLGNDTLPSGSSIHDQVAAVQAIGGDITISFGGANGQEAALTFSSATKLTAAYQSVLDTYHV NKIDFDIEGGAIANTSANHLRDQALVALEAANPDLKVSFTLPVLPTGLTNDGLNLLKQALTDGVHIDTVNIMAMDYGASV DSGDMGTDAISAAQATLAQMHTLGLDAKLGVTVMVGMNDVQSEVFTLSDAQQLLDYAQGNEDISGLSIWSVGRDNGSTVG TVSPLGSGIQQTAYEFSHIFGHI >Mature_742_residues AKTTTITWSWGTNSVIAFDPASDILDFGWFQAGQFTVSEVNGSVVISIPTNNQTYTLTGVTLSELSLSNILAKDSGAVTE WTTALGGASAGSGGSSGGATSGGATSGGTSTGGSAGGSPASGTTDGGTSGSSGGAGHVGDGLATVTTISWAWGTHTALNF DTALDKLDFGWLSADNFTVSEVNGSVVIAIPSNSQTYTLTGVTLSELSLANIVAKDGSALAEWTTALSGHSGGSSGTSGG STGGSTSGGGSSSAGGSTSTGGGSTGGGSTGGSSTGGSTGGTSGGGTSGGDAALYAEAWSASKVYQGGDHAAVGNNVYEA HWWTQGTDPSTHNGGDGSGQVWTLVGHLDTTTVVPNAPADLFATNVSDTSALLVWDKAVINGAGTVSAYEIYENGTLVGT TSGTSYKVTGLGASTAYSFTVVAVDEAGHSPAAVPISVTTDPVHTSTLEQTYSPYIDMSLSTSQDLLSIAKASGVTDFTL AFVLSSGTDTLGWGGVGTLGNDTLPSGSSIHDQVAAVQAIGGDITISFGGANGQEAALTFSSATKLTAAYQSVLDTYHVN KIDFDIEGGAIANTSANHLRDQALVALEAANPDLKVSFTLPVLPTGLTNDGLNLLKQALTDGVHIDTVNIMAMDYGASVD SGDMGTDAISAAQATLAQMHTLGLDAKLGVTVMVGMNDVQSEVFTLSDAQQLLDYAQGNEDISGLSIWSVGRDNGSTVGT VSPLGSGIQQTAYEFSHIFGHI
Specific function: Bifunctional enzyme with lysozyme/chitinase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 chitin-binding type-3 domains [H]
Homologues:
Organism=Escherichia coli, GI1789736, Length=476, Percent_Identity=30.8823529411765, Blast_Score=192, Evalue=7e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02839 CBM_5_12 [H]
EC number: =3.2.1.14; =3.2.1.17 [H]
Molecular weight: Translated: 73856; Mature: 73724
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTTTITWSWGTNSVIAFDPASDILDFGWFQAGQFTVSEVNGSVVISIPTNNQTYTLTG CCCEEEEEEECCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEC VTLSELSLSNILAKDSGAVTEWTTALGGASAGSGGSSGGATSGGATSGGTSTGGSAGGSP CCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGTTDGGTSGSSGGAGHVGDGLATVTTISWAWGTHTALNFDTALDKLDFGWLSADNFTV CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHCCCCEECCCCEEE SEVNGSVVIAIPSNSQTYTLTGVTLSELSLANIVAKDGSALAEWTTALSGHSGGSSGTSG EECCCEEEEEECCCCCEEEEECCCHHHHHEEHHEECCCCHHHHHHHHHCCCCCCCCCCCC GSTGGSTSGGGSSSAGGSTSTGGGSTGGGSTGGSSTGGSTGGTSGGGTSGGDAALYAEAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SASKVYQGGDHAAVGNNVYEAHWWTQGTDPSTHNGGDGSGQVWTLVGHLDTTTVVPNAPA CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCH DLFATNVSDTSALLVWDKAVINGAGTVSAYEIYENGTLVGTTSGTSYKVTGLGASTAYSF HHEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEECCEEEEECCCCEEEEEECCCCCEEEE TVVAVDEAGHSPAAVPISVTTDPVHTSTLEQTYSPYIDMSLSTSQDLLSIAKASGVTDFT EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEE LAFVLSSGTDTLGWGGVGTLGNDTLPSGSSIHDQVAAVQAIGGDITISFGGANGQEAALT EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEE FSSATKLTAAYQSVLDTYHVNKIDFDIEGGAIANTSANHLRDQALVALEAANPDLKVSFT ECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHCCEEEEEEEECCCCEEEEEE LPVLPTGLTNDGLNLLKQALTDGVHIDTVNIMAMDYGASVDSGDMGTDAISAAQATLAQM ECCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH HTLGLDAKLGVTVMVGMNDVQSEVFTLSDAQQLLDYAQGNEDISGLSIWSVGRDNGSTVG HHHCCCCCCCEEEEECCCHHHHHHEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE TVSPLGSGIQQTAYEFSHIFGHI ECCHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AKTTTITWSWGTNSVIAFDPASDILDFGWFQAGQFTVSEVNGSVVISIPTNNQTYTLTG CCEEEEEEECCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEC VTLSELSLSNILAKDSGAVTEWTTALGGASAGSGGSSGGATSGGATSGGTSTGGSAGGSP CCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGTTDGGTSGSSGGAGHVGDGLATVTTISWAWGTHTALNFDTALDKLDFGWLSADNFTV CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHCCCCEECCCCEEE SEVNGSVVIAIPSNSQTYTLTGVTLSELSLANIVAKDGSALAEWTTALSGHSGGSSGTSG EECCCEEEEEECCCCCEEEEECCCHHHHHEEHHEECCCCHHHHHHHHHCCCCCCCCCCCC GSTGGSTSGGGSSSAGGSTSTGGGSTGGGSTGGSSTGGSTGGTSGGGTSGGDAALYAEAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SASKVYQGGDHAAVGNNVYEAHWWTQGTDPSTHNGGDGSGQVWTLVGHLDTTTVVPNAPA CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCH DLFATNVSDTSALLVWDKAVINGAGTVSAYEIYENGTLVGTTSGTSYKVTGLGASTAYSF HHEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEECCEEEEECCCCEEEEEECCCCCEEEE TVVAVDEAGHSPAAVPISVTTDPVHTSTLEQTYSPYIDMSLSTSQDLLSIAKASGVTDFT EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEE LAFVLSSGTDTLGWGGVGTLGNDTLPSGSSIHDQVAAVQAIGGDITISFGGANGQEAALT EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEE FSSATKLTAAYQSVLDTYHVNKIDFDIEGGAIANTSANHLRDQALVALEAANPDLKVSFT ECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHCCEEEEEEEECCCCEEEEEE LPVLPTGLTNDGLNLLKQALTDGVHIDTVNIMAMDYGASVDSGDMGTDAISAAQATLAQM ECCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH HTLGLDAKLGVTVMVGMNDVQSEVFTLSDAQQLLDYAQGNEDISGLSIWSVGRDNGSTVG HHHCCCCCCCEEEEECCCHHHHHHEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE TVSPLGSGIQQTAYEFSHIFGHI ECCHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 2661540; 10419961; 10760150 [H]