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The map label for this gene is dapA [H]

Identifier: 158424481

GI number: 158424481

Start: 3253653

End: 3254585

Strand: Direct

Name: dapA [H]

Synonym: AZC_2857

Alternate gene names: 158424481

Gene position: 3253653-3254585 (Clockwise)

Preceding gene: 158424476

Following gene: 158424482

Centisome position: 60.59

GC content: 66.13

Gene sequence:

>933_bases
ATGGCGATCGACTGGAAGGGCCTCAACCCGGCCCCCGTGACCCTGTTCAAGGACAATGGCGACGTCGATTTCGACGGCAA
CGCGCGCCTCGCCAAGTGGCTGGCGGCGATCCCCGGCGTGAAGAGCCTGGTGATCCTCGGCCATGCCGGCGAAGGCACCT
TCCTCACCCATGACGAGCAGCTCGAGCTGATCCGCGTCTACAAGGACGCGACCCCCCTGCCCGTGGTGGCCGGCATCACC
GGCGAGGGCACCAAGGTGGCTGAGATCGAGGCCAGGCAGAAGATCGACGCCGGCGCCAGCGCCGCGCTCGTCTATCCCAA
CCACGGCTGGCTGCGCTTCGGCTATCAGAAGGGCGCCCCGCAGGACCGCTACAAGGCCATCGCCCAGTCTGGCCTCGAAT
GCATCCTGTTCCAGTATCCGGCCGTGACGAAGGCCAATTACGACCTTCAGACCCAGCTCGAGATCGCCGCCATTCCGGGC
GTGACCGCCACCAAGAACGGCGTGCGCGACATGAAGCGGTGGTATGATGAGATCCCGGCGCTCAAGAACGCCTTCCCGGA
CCTCGCCATCATGTCCTGCCACGACGAATGGCTGCTGCCCACCATGTTTGACGTGGATGGCCTTCTGGTCGGCTACGGCA
ACATGGCCCCCGAACTGCTGCTGGAGTTCCTGAAGGCCGGCAAGGCGCAGGATTACACGCTGGCCCGCAAGTATCACGAG
CAGCTCCTGCCGCTGACCCGCACCGTCTATCACCGCGGCTCGCACATGGAAGGCACGGTCGCGCTCAAGCACGCGCTACG
CGCCCGCGGCCTCATCGACAATGTGAACATCCGCGAGCCGCTGAAGCCGCTCGGCGATGCCGCCGACCGCGAGATCCGCG
CCGCCGTGAAGGCCGCCGGCATCGAAGTGGTGTCGAACGCCATCGCGGCCTGA

Upstream 100 bases:

>100_bases
AGTCTGATGATGGGAACGTTCCCGCTAACGATCCTAAAAACGGGGGAGCGGAGGCGGGACCCGTATTTCGGTCTGACACT
CCTAGGGAAGGAACGAGACG

Downstream 100 bases:

>100_bases
CCCCGAGGCGCGCCAACGCCTCGCTGATTTGGGGAAGAGGGAGTGCCGGATCGGCCCGCACGGGCCGGTCCGGCGCAGCT
CGCCGACATTCCGGAGGACC

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MAIDWKGLNPAPVTLFKDNGDVDFDGNARLAKWLAAIPGVKSLVILGHAGEGTFLTHDEQLELIRVYKDATPLPVVAGIT
GEGTKVAEIEARQKIDAGASAALVYPNHGWLRFGYQKGAPQDRYKAIAQSGLECILFQYPAVTKANYDLQTQLEIAAIPG
VTATKNGVRDMKRWYDEIPALKNAFPDLAIMSCHDEWLLPTMFDVDGLLVGYGNMAPELLLEFLKAGKAQDYTLARKYHE
QLLPLTRTVYHRGSHMEGTVALKHALRARGLIDNVNIREPLKPLGDAADREIRAAVKAAGIEVVSNAIAA

Sequences:

>Translated_310_residues
MAIDWKGLNPAPVTLFKDNGDVDFDGNARLAKWLAAIPGVKSLVILGHAGEGTFLTHDEQLELIRVYKDATPLPVVAGIT
GEGTKVAEIEARQKIDAGASAALVYPNHGWLRFGYQKGAPQDRYKAIAQSGLECILFQYPAVTKANYDLQTQLEIAAIPG
VTATKNGVRDMKRWYDEIPALKNAFPDLAIMSCHDEWLLPTMFDVDGLLVGYGNMAPELLLEFLKAGKAQDYTLARKYHE
QLLPLTRTVYHRGSHMEGTVALKHALRARGLIDNVNIREPLKPLGDAADREIRAAVKAAGIEVVSNAIAA
>Mature_309_residues
AIDWKGLNPAPVTLFKDNGDVDFDGNARLAKWLAAIPGVKSLVILGHAGEGTFLTHDEQLELIRVYKDATPLPVVAGITG
EGTKVAEIEARQKIDAGASAALVYPNHGWLRFGYQKGAPQDRYKAIAQSGLECILFQYPAVTKANYDLQTQLEIAAIPGV
TATKNGVRDMKRWYDEIPALKNAFPDLAIMSCHDEWLLPTMFDVDGLLVGYGNMAPELLLEFLKAGKAQDYTLARKYHEQ
LLPLTRTVYHRGSHMEGTVALKHALRARGLIDNVNIREPLKPLGDAADREIRAAVKAAGIEVVSNAIAA

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; first step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1788823, Length=303, Percent_Identity=25.4125412541254, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33865; Mature: 33734

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDWKGLNPAPVTLFKDNGDVDFDGNARLAKWLAAIPGVKSLVILGHAGEGTFLTHDEQ
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHH
LELIRVYKDATPLPVVAGITGEGTKVAEIEARQKIDAGASAALVYPNHGWLRFGYQKGAP
HHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
QDRYKAIAQSGLECILFQYPAVTKANYDLQTQLEIAAIPGVTATKNGVRDMKRWYDEIPA
HHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LKNAFPDLAIMSCHDEWLLPTMFDVDGLLVGYGNMAPELLLEFLKAGKAQDYTLARKYHE
HHHCCCCEEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH
QLLPLTRTVYHRGSHMEGTVALKHALRARGLIDNVNIREPLKPLGDAADREIRAAVKAAG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
IEVVSNAIAA
HHHHHHHHCC
>Mature Secondary Structure 
AIDWKGLNPAPVTLFKDNGDVDFDGNARLAKWLAAIPGVKSLVILGHAGEGTFLTHDEQ
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHH
LELIRVYKDATPLPVVAGITGEGTKVAEIEARQKIDAGASAALVYPNHGWLRFGYQKGAP
HHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
QDRYKAIAQSGLECILFQYPAVTKANYDLQTQLEIAAIPGVTATKNGVRDMKRWYDEIPA
HHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LKNAFPDLAIMSCHDEWLLPTMFDVDGLLVGYGNMAPELLLEFLKAGKAQDYTLARKYHE
HHHCCCCEEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH
QLLPLTRTVYHRGSHMEGTVALKHALRARGLIDNVNIREPLKPLGDAADREIRAAVKAAG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
IEVVSNAIAA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA