| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is iorA [H]
Identifier: 158424424
GI number: 158424424
Start: 3181560
End: 3182054
Strand: Direct
Name: iorA [H]
Synonym: AZC_2800
Alternate gene names: 158424424
Gene position: 3181560-3182054 (Clockwise)
Preceding gene: 158424413
Following gene: 158424425
Centisome position: 59.25
GC content: 68.48
Gene sequence:
>495_bases ATGGCGGATGAGGTTGCCTTCACCGTGAACGGCGTGCCGCACGGCTTCGCGCTGCCGCGTGAGACCCCGCTCATTTATGT GCTGCGCAACGATCTCGGCCTCAACGGCCCCAAGTTCGGCTGCGGCCTTGGCGAATGCGGCGCCTGCACGGTGCTGGTGG ACGGGGTGGCGGCGCGTTCCTGCGTCACCAAGCTCGCCAGCGTGGAGGGCCGCGCGGTGACGACGCTGGAGGGCCTTGGC ACGCTGGCCGCCCCGCATCCGGTACAGGCCGCCTTCATCGCCGAACAGGGCGCCCAGTGCGGCTATTGTCTCAACGGCAT GATAATGACGACAGTCGCCTTTCTGAAGCGCAACCCCAGCCCCACCGAGGCCGAGGCCCGCGAAGCGCTACGCTACAATC TCTGCCGCTGCGGGACGCACGTGGAAATCCTGCGCTCCGTGCTGCGCGCCGCAAGCGACATGGCCGCCGCGCCAGAGACG AGCGTGGCGCCATGA
Upstream 100 bases:
>100_bases CCAGCCAGAGGGGCGGACATGATCGCGAACCCACAGCGCGCGGCGGGCCTTGCGGCCTGCGGCGCCCGTTGTCGTTTGTC CGGCCCGGAGCGGGCGCGAC
Downstream 100 bases:
>100_bases CCGAGCCGGCGCCTTCCCCCGACGCTCTGCTCGCCCGCGCCGGCACGCTCGCCATCCTGCGCCCGGCGCAGCATGTGAAG GGCCTCGTGCCCACCGCCCC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MADEVAFTVNGVPHGFALPRETPLIYVLRNDLGLNGPKFGCGLGECGACTVLVDGVAARSCVTKLASVEGRAVTTLEGLG TLAAPHPVQAAFIAEQGAQCGYCLNGMIMTTVAFLKRNPSPTEAEAREALRYNLCRCGTHVEILRSVLRAASDMAAAPET SVAP
Sequences:
>Translated_164_residues MADEVAFTVNGVPHGFALPRETPLIYVLRNDLGLNGPKFGCGLGECGACTVLVDGVAARSCVTKLASVEGRAVTTLEGLG TLAAPHPVQAAFIAEQGAQCGYCLNGMIMTTVAFLKRNPSPTEAEAREALRYNLCRCGTHVEILRSVLRAASDMAAAPET SVAP >Mature_163_residues ADEVAFTVNGVPHGFALPRETPLIYVLRNDLGLNGPKFGCGLGECGACTVLVDGVAARSCVTKLASVEGRAVTTLEGLGT LAAPHPVQAAFIAEQGAQCGYCLNGMIMTTVAFLKRNPSPTEAEAREALRYNLCRCGTHVEILRSVLRAASDMAAAPETS VAP
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=157, Percent_Identity=40.7643312101911, Blast_Score=84, Evalue=4e-17, Organism=Homo sapiens, GI71773480, Length=88, Percent_Identity=40.9090909090909, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI1786480, Length=167, Percent_Identity=38.9221556886228, Blast_Score=115, Evalue=1e-27, Organism=Escherichia coli, GI1789232, Length=146, Percent_Identity=42.4657534246575, Blast_Score=98, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17540638, Length=164, Percent_Identity=38.4146341463415, Blast_Score=111, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17539860, Length=137, Percent_Identity=37.956204379562, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI32566215, Length=143, Percent_Identity=35.6643356643357, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=38.1578947368421, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=33.9506172839506, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24647199, Length=156, Percent_Identity=32.6923076923077, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24647201, Length=156, Percent_Identity=31.4102564102564, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17090; Mature: 16959
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEVAFTVNGVPHGFALPRETPLIYVLRNDLGLNGPKFGCGLGECGACTVLVDGVAARS CCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CVTKLASVEGRAVTTLEGLGTLAAPHPVQAAFIAEQGAQCGYCLNGMIMTTVAFLKRNPS HHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC PTEAEAREALRYNLCRCGTHVEILRSVLRAASDMAAAPETSVAP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADEVAFTVNGVPHGFALPRETPLIYVLRNDLGLNGPKFGCGLGECGACTVLVDGVAARS CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CVTKLASVEGRAVTTLEGLGTLAAPHPVQAAFIAEQGAQCGYCLNGMIMTTVAFLKRNPS HHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC PTEAEAREALRYNLCRCGTHVEILRSVLRAASDMAAAPETSVAP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]