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The map label for this gene is asnC [H]

Identifier: 158424397

GI number: 158424397

Start: 3154409

End: 3154876

Strand: Reverse

Name: asnC [H]

Synonym: AZC_2773

Alternate gene names: 158424397

Gene position: 3154876-3154409 (Counterclockwise)

Preceding gene: 158424399

Following gene: 158424395

Centisome position: 58.75

GC content: 63.46

Gene sequence:

>468_bases
GTGCCAGATGCCATCGATTGCCGCATCCTCGACCTCTTGCAAGAGGATGCGCTCATGTCCTCCGCAACCGTGGCGGAGCA
GGTTGGGCTCAGCCCGACACCGTGCTGGCGCCGCATCAAGAAGCTGGAGGATGACGGCTACATCCTGAAACGGGTGGCCC
TGCTGGATCGCCGCAAGGCCAACGTGCCGCTGACCGTCTTCGTGGCCGTGAAGGCGGCCCGCCACAGCATGGAATGGCTG
GAGAGCTTCCGCCGGGCCATCTCCTCCATGCCCGAGATCGTGGAAGCGTGGCGCCTGACCGGCGAGACCGACTATCTGCT
GCGCGTGGTGGTGCCGGACATCGACGCCTATGACGAGGTGTACAAGCGCCTCATCTCGAAGCTGGAATTCTCCAACCTCT
CCTCATCGCTGGCCATGGAGGAGATGAAGTTCACGACGGCCATCCCCACCACCTACATGGCGCGCTGA

Upstream 100 bases:

>100_bases
TCGATCTGGAGCAATCGGTGCTCGCGATCTTGTGTGCGGGACGACATGTGCATGCTACAACAAGGCGATTGCCGCAGATT
GAAATTCTCCGGAGCGTGCC

Downstream 100 bases:

>100_bases
CCGCGCTCACGACGCCCAGCGCTGCTCGCTCTCCCGTCGCAGCGCCTCGGCCTTGAGCGCGGCGCGGTCGATCTTGTTGG
TACCGGCCCAGGGCAGTTCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPDAIDCRILDLLQEDALMSSATVAEQVGLSPTPCWRRIKKLEDDGYILKRVALLDRRKANVPLTVFVAVKAARHSMEWL
ESFRRAISSMPEIVEAWRLTGETDYLLRVVVPDIDAYDEVYKRLISKLEFSNLSSSLAMEEMKFTTAIPTTYMAR

Sequences:

>Translated_155_residues
MPDAIDCRILDLLQEDALMSSATVAEQVGLSPTPCWRRIKKLEDDGYILKRVALLDRRKANVPLTVFVAVKAARHSMEWL
ESFRRAISSMPEIVEAWRLTGETDYLLRVVVPDIDAYDEVYKRLISKLEFSNLSSSLAMEEMKFTTAIPTTYMAR
>Mature_154_residues
PDAIDCRILDLLQEDALMSSATVAEQVGLSPTPCWRRIKKLEDDGYILKRVALLDRRKANVPLTVFVAVKAARHSMEWLE
SFRRAISSMPEIVEAWRLTGETDYLLRVVVPDIDAYDEVYKRLISKLEFSNLSSSLAMEEMKFTTAIPTTYMAR

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=48, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=36.6197183098592, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17716; Mature: 17585

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDAIDCRILDLLQEDALMSSATVAEQVGLSPTPCWRRIKKLEDDGYILKRVALLDRRKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC
NVPLTVFVAVKAARHSMEWLESFRRAISSMPEIVEAWRLTGETDYLLRVVVPDIDAYDEV
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCHHHHH
YKRLISKLEFSNLSSSLAMEEMKFTTAIPTTYMAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
PDAIDCRILDLLQEDALMSSATVAEQVGLSPTPCWRRIKKLEDDGYILKRVALLDRRKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC
NVPLTVFVAVKAARHSMEWLESFRRAISSMPEIVEAWRLTGETDYLLRVVVPDIDAYDEV
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCHHHHH
YKRLISKLEFSNLSSSLAMEEMKFTTAIPTTYMAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]