| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ywrD [H]
Identifier: 158424395
GI number: 158424395
Start: 3151004
End: 3152683
Strand: Reverse
Name: ywrD [H]
Synonym: AZC_2771
Alternate gene names: 158424395
Gene position: 3152683-3151004 (Counterclockwise)
Preceding gene: 158424397
Following gene: 158424394
Centisome position: 58.71
GC content: 68.75
Gene sequence:
>1680_bases TTGCAAGCTTTCCTCCTGACCCCGGGCGCACTAGAGACGAAGCAGACATACGCCCCAGCGCAGAAGAGGCCCACCGTGGA TCTGTCGTCGCTCGATTATCGCACCTCCTATCCAATGCATCGCCAGCCGGTGCTCGGCCGCAATGTGGTCAGCACCTCGC AGCCGCTGGCGGCGCAAGCGGGCCTGTCCATGCTGGCGCGCGGCGGCAATGCGGTGGATGCCGCCATCGCCACTGCTATG GCGCTGGTGGTGGTGGAGCCGTCCGGCAACGGCCTCGGCTCCGACGGCTTCGCCATCCTGTGGGACGGGCAGCAACTGCA TGGCCTCAACGCCTCCGGCCGCTCTCCCGCCGGCTGGACGCGCGACCGCTTCGCCGGCCGGGCGGTGATGCCCGAGCGCG GCTGGGACGCGGTGACGGTGCCGGGCGCGGTTTCGGGCTGGATCGCCCTGTGGCGGCGCTTCGGTTCGCTGCCGCTGGAG GTGATCGCCGAGCCCGCCATCCGCTATGCGCGCGAGGGCTATCCGGTTTCTCCCAGCGTCGCAAAGCTCTGGGCCAATGC CGAGAAAATCCTGTCCGACCAGCCCGGCTTCGCGGAGGCCTTCCTGCCCGAGGGGCGGGCGCCGAAGGCGGGCGAGGTGT TCCGCTGCGAGCCCATGGCCCGGAGCCTCGAACTCATCGCCCAGACCGAAGGCGAGGCCTTCTATCGCGGTGAACTCGCC GACAAGATGATCGCCCATGCCAAGGCCCATGGGGCGGCAATGTCCCTCGACGATCTCGGCGCCCATCAGGCGGACTTCGT CGAGACCCTGTCGCAGCCCTTCGGCTCCGGCGTGGTGCACGAACTGCCGCCGAACGGGCAGGGCATCGCCACCCTCATCA CCCTCGGCATTCTGGAAGCGCTCGGCGCGCCGCATGAGGACGTGGACAGCGTTGCCGGCATTCATCTGGGCATCGAGGCC ACCAAGCTCGCTCTGGCCGACCTGTTCCAGTATGTGGCCGATCCGGCCTACATGAATATCGATCCCGCCTCGCTCCTCGA TCCCGCCTATCTCGCCGAGCGTGCGAAGCTGATCGACCGCAGCAAGGCGAGCCTGCCCAGCTATGGCGCGCCGCGCCAGG CCGGCACGGTCTATCTCACGGTGGCGGACGCGAAGGGCATGATGGTGTCCTTCATCCAGTCCAACTACATGGGTTTCGGT TCGGGGGTGGTCGTGCCGGGCACCGGCATCAGCCTGCAGAACCGCGGCGCTGGCTTCGTGCTGAAGCAGGGCCACGCCAA TGAGGTGGCGCCGCGCAAGCGCCCGTTCCAGACCATTATCCCCGGCTTCGCCATGGACCATGCGGGCGCGCCGCTCATGT CCTTCGGCGTCATGGGCGGGCCGATGCAGGCACAGGGCCACACCCAGATGGCGCTCCGGGTGCTGCGGTACAACCAGAAC CCGCAGGCGGCCGCAGATGCGCCGCGCTGGCGCGTGGTGGCGGGCCGCAAGGTGGCGGTGGAACCGGGTGTGGGTCTCGA GGTTCTGGAAGGGCTGAAGGTGCTTGGCCACGAGATCGTGGTGGACCCGCCGGAGGCGGTCTTCGCCTTCGGCTCGGCCC AGCTCATCGTGCGCGGCGACAACGGCTTCTATGCCGCCGGCTGCGACAGCCGCAAGGACAGCCAGGCCGCCGCCTTCTGA
Upstream 100 bases:
>100_bases CTTAGTCGTCCGATACCGAAGGCCAAGCCCATGGTCGCGAAGACCCTCTCATACCTTTGCGGCATGCGGTTTCCTGCAGC GCCGGTCAGGTTCTGATGCA
Downstream 100 bases:
>100_bases TCGACGCCGCCCGGTCCGCCGGGCGGCATGCCATTGAGAGGTTTGGAGGAGGTGATGGCCGACGATCCGTTCCACCTCCA GCGCTTCCTCGATGCGCAGA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MQAFLLTPGALETKQTYAPAQKRPTVDLSSLDYRTSYPMHRQPVLGRNVVSTSQPLAAQAGLSMLARGGNAVDAAIATAM ALVVVEPSGNGLGSDGFAILWDGQQLHGLNASGRSPAGWTRDRFAGRAVMPERGWDAVTVPGAVSGWIALWRRFGSLPLE VIAEPAIRYAREGYPVSPSVAKLWANAEKILSDQPGFAEAFLPEGRAPKAGEVFRCEPMARSLELIAQTEGEAFYRGELA DKMIAHAKAHGAAMSLDDLGAHQADFVETLSQPFGSGVVHELPPNGQGIATLITLGILEALGAPHEDVDSVAGIHLGIEA TKLALADLFQYVADPAYMNIDPASLLDPAYLAERAKLIDRSKASLPSYGAPRQAGTVYLTVADAKGMMVSFIQSNYMGFG SGVVVPGTGISLQNRGAGFVLKQGHANEVAPRKRPFQTIIPGFAMDHAGAPLMSFGVMGGPMQAQGHTQMALRVLRYNQN PQAAADAPRWRVVAGRKVAVEPGVGLEVLEGLKVLGHEIVVDPPEAVFAFGSAQLIVRGDNGFYAAGCDSRKDSQAAAF
Sequences:
>Translated_559_residues MQAFLLTPGALETKQTYAPAQKRPTVDLSSLDYRTSYPMHRQPVLGRNVVSTSQPLAAQAGLSMLARGGNAVDAAIATAM ALVVVEPSGNGLGSDGFAILWDGQQLHGLNASGRSPAGWTRDRFAGRAVMPERGWDAVTVPGAVSGWIALWRRFGSLPLE VIAEPAIRYAREGYPVSPSVAKLWANAEKILSDQPGFAEAFLPEGRAPKAGEVFRCEPMARSLELIAQTEGEAFYRGELA DKMIAHAKAHGAAMSLDDLGAHQADFVETLSQPFGSGVVHELPPNGQGIATLITLGILEALGAPHEDVDSVAGIHLGIEA TKLALADLFQYVADPAYMNIDPASLLDPAYLAERAKLIDRSKASLPSYGAPRQAGTVYLTVADAKGMMVSFIQSNYMGFG SGVVVPGTGISLQNRGAGFVLKQGHANEVAPRKRPFQTIIPGFAMDHAGAPLMSFGVMGGPMQAQGHTQMALRVLRYNQN PQAAADAPRWRVVAGRKVAVEPGVGLEVLEGLKVLGHEIVVDPPEAVFAFGSAQLIVRGDNGFYAAGCDSRKDSQAAAF >Mature_559_residues MQAFLLTPGALETKQTYAPAQKRPTVDLSSLDYRTSYPMHRQPVLGRNVVSTSQPLAAQAGLSMLARGGNAVDAAIATAM ALVVVEPSGNGLGSDGFAILWDGQQLHGLNASGRSPAGWTRDRFAGRAVMPERGWDAVTVPGAVSGWIALWRRFGSLPLE VIAEPAIRYAREGYPVSPSVAKLWANAEKILSDQPGFAEAFLPEGRAPKAGEVFRCEPMARSLELIAQTEGEAFYRGELA DKMIAHAKAHGAAMSLDDLGAHQADFVETLSQPFGSGVVHELPPNGQGIATLITLGILEALGAPHEDVDSVAGIHLGIEA TKLALADLFQYVADPAYMNIDPASLLDPAYLAERAKLIDRSKASLPSYGAPRQAGTVYLTVADAKGMMVSFIQSNYMGFG SGVVVPGTGISLQNRGAGFVLKQGHANEVAPRKRPFQTIIPGFAMDHAGAPLMSFGVMGGPMQAQGHTQMALRVLRYNQN PQAAADAPRWRVVAGRKVAVEPGVGLEVLEGLKVLGHEIVVDPPEAVFAFGSAQLIVRGDNGFYAAGCDSRKDSQAAAF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=543, Percent_Identity=24.6777163904236, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915090, Length=543, Percent_Identity=24.6777163904236, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915096, Length=543, Percent_Identity=24.6777163904236, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI73915094, Length=543, Percent_Identity=24.6777163904236, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI113429324, Length=548, Percent_Identity=25.3649635036496, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI113429326, Length=553, Percent_Identity=25.1356238698011, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI109148539, Length=468, Percent_Identity=27.5641025641026, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI153266885, Length=540, Percent_Identity=23.3333333333333, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI153266901, Length=541, Percent_Identity=23.2902033271719, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI153266907, Length=536, Percent_Identity=22.7611940298507, Blast_Score=91, Evalue=4e-18, Organism=Escherichia coli, GI1789856, Length=530, Percent_Identity=27.7358490566038, Blast_Score=179, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17506189, Length=477, Percent_Identity=25.9958071278826, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI212646519, Length=472, Percent_Identity=24.364406779661, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI72000294, Length=472, Percent_Identity=24.5762711864407, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17542894, Length=489, Percent_Identity=25.1533742331288, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI193208245, Length=483, Percent_Identity=23.3954451345756, Blast_Score=105, Evalue=8e-23, Organism=Caenorhabditis elegans, GI193208247, Length=483, Percent_Identity=23.3954451345756, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17564448, Length=392, Percent_Identity=23.9795918367347, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323330, Length=511, Percent_Identity=22.3091976516634, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859893, Length=506, Percent_Identity=26.2845849802372, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI161077496, Length=489, Percent_Identity=26.1758691206544, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI161077878, Length=467, Percent_Identity=25.6959314775161, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI161077880, Length=467, Percent_Identity=25.6959314775161, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24642670, Length=467, Percent_Identity=25.6959314775161, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24642666, Length=467, Percent_Identity=25.6959314775161, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI45551474, Length=467, Percent_Identity=25.6959314775161, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859741, Length=489, Percent_Identity=23.5173824130879, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 59096; Mature: 59096
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFLLTPGALETKQTYAPAQKRPTVDLSSLDYRTSYPMHRQPVLGRNVVSTSQPLAAQA CCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GLSMLARGGNAVDAAIATAMALVVVEPSGNGLGSDGFAILWDGQQLHGLNASGRSPAGWT HHHHHHCCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCC RDRFAGRAVMPERGWDAVTVPGAVSGWIALWRRFGSLPLEVIAEPAIRYAREGYPVSPSV HHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH AKLWANAEKILSDQPGFAEAFLPEGRAPKAGEVFRCEPMARSLELIAQTEGEAFYRGELA HHHHHCHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEHHHHH DKMIAHAKAHGAAMSLDDLGAHQADFVETLSQPFGSGVVHELPPNGQGIATLITLGILEA HHHHHHHHHCCCEECHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHH LGAPHEDVDSVAGIHLGIEATKLALADLFQYVADPAYMNIDPASLLDPAYLAERAKLIDR HCCCHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHH SKASLPSYGAPRQAGTVYLTVADAKGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGAGFV HHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCEE LKQGHANEVAPRKRPFQTIIPGFAMDHAGAPLMSFGVMGGPMQAQGHTQMALRVLRYNQN EECCCCCCCCCCCCCHHHHCCCHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC PQAAADAPRWRVVAGRKVAVEPGVGLEVLEGLKVLGHEIVVDPPEAVFAFGSAQLIVRGD CCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHCCEEEECCHHHHEEECCEEEEEECC NGFYAAGCDSRKDSQAAAF CCEEECCCCCCCCCCCCCC >Mature Secondary Structure MQAFLLTPGALETKQTYAPAQKRPTVDLSSLDYRTSYPMHRQPVLGRNVVSTSQPLAAQA CCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GLSMLARGGNAVDAAIATAMALVVVEPSGNGLGSDGFAILWDGQQLHGLNASGRSPAGWT HHHHHHCCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCC RDRFAGRAVMPERGWDAVTVPGAVSGWIALWRRFGSLPLEVIAEPAIRYAREGYPVSPSV HHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH AKLWANAEKILSDQPGFAEAFLPEGRAPKAGEVFRCEPMARSLELIAQTEGEAFYRGELA HHHHHCHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEHHHHH DKMIAHAKAHGAAMSLDDLGAHQADFVETLSQPFGSGVVHELPPNGQGIATLITLGILEA HHHHHHHHHCCCEECHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHH LGAPHEDVDSVAGIHLGIEATKLALADLFQYVADPAYMNIDPASLLDPAYLAERAKLIDR HCCCHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHH SKASLPSYGAPRQAGTVYLTVADAKGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGAGFV HHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCEE LKQGHANEVAPRKRPFQTIIPGFAMDHAGAPLMSFGVMGGPMQAQGHTQMALRVLRYNQN EECCCCCCCCCCCCCHHHHCCCHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC PQAAADAPRWRVVAGRKVAVEPGVGLEVLEGLKVLGHEIVVDPPEAVFAFGSAQLIVRGD CCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHCCEEEECCHHHHEEECCEEEEEECC NGFYAAGCDSRKDSQAAAF CCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]