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The map label for this gene is gntR [H]

Identifier: 158424391

GI number: 158424391

Start: 3147442

End: 3148155

Strand: Reverse

Name: gntR [H]

Synonym: AZC_2767

Alternate gene names: 158424391

Gene position: 3148155-3147442 (Counterclockwise)

Preceding gene: 158424392

Following gene: 158424388

Centisome position: 58.63

GC content: 72.27

Gene sequence:

>714_bases
GTGCCGCGCGTCAAGCGCACGCTGCCGGGCTTCGACCTCGCCGCCGCGCTTTCGGGGGCGCAGGTGGATCGCGCCTTGCC
GATCGGGCCGCAGGTCTATGACGTCCTGCGGCGGCTGATCGTGCTGTCGCGCCTGCCCTCCGGCGCGCCGCTGCACGAGG
CCGACATCGCCGCCGCTCTCGGCATTTCCCGCACCCCTGTGCGTGCCGCCTTCCAGCAACTGGCGCTGGAGGGGCTGGTG
AACACCTGGCCCCAGGTGGGCTCGGTGGTGGCAGCGGTGGACCGGGCCAAGATCGAGGAAGGCCTCATCATTCGCCGGGC
GCTCGAAGGCGAGGTGGTTCGCCTCCTGTGCGCCGGTGCGCCGGATTGGGCGCGTCTCGATGCTCTCATGGCGGCGCAGG
CGGCAGCGGTGGGCGCCAATGACGCGGATGCCTTCTTCGCCGCCGACGAGGCGTTTCACGCCGCGCTCGCGGACATGGCG
GGCGTGCCGCAGGCGTGGCGGCTGCTTCAGGCGGTCAAGGCCCACATCGACCGCGTGCGCCTTCTGGTGACGCGCCGCCA
GCCGGACCGCTTCCATGCGGCCTTTGCCGAGCATCAGGCGGTGCTCGATGCGGTCCGCCGTCGGGATCCGGAGGAAGCCG
CAGCCCGGATGGCCCATCATGTGGAGGCAGTGCGCGGCAGCCTGCACCTGCTCGGGGTCGTCGCGACCGGCTGA

Upstream 100 bases:

>100_bases
CCCGCCATCGGCCGCCTGAAGGGACTGGCGGAACTGCGGGGCATCATGACCGCGCTCGCCCATCCCCTGCACCTCGAACG
CGCCTGACCGGGGCGCGTTC

Downstream 100 bases:

>100_bases
CCGAGGGAGATGCTTCAAAAGACGAAACGCCTCGCCCGAGGGTGCGGGCGAGGCGTCTGGAGGCCACGTTGGGGGGCAGT
CCCCAAAGAAGCTGGCGCTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPRVKRTLPGFDLAAALSGAQVDRALPIGPQVYDVLRRLIVLSRLPSGAPLHEADIAAALGISRTPVRAAFQQLALEGLV
NTWPQVGSVVAAVDRAKIEEGLIIRRALEGEVVRLLCAGAPDWARLDALMAAQAAAVGANDADAFFAADEAFHAALADMA
GVPQAWRLLQAVKAHIDRVRLLVTRRQPDRFHAAFAEHQAVLDAVRRRDPEEAAARMAHHVEAVRGSLHLLGVVATG

Sequences:

>Translated_237_residues
MPRVKRTLPGFDLAAALSGAQVDRALPIGPQVYDVLRRLIVLSRLPSGAPLHEADIAAALGISRTPVRAAFQQLALEGLV
NTWPQVGSVVAAVDRAKIEEGLIIRRALEGEVVRLLCAGAPDWARLDALMAAQAAAVGANDADAFFAADEAFHAALADMA
GVPQAWRLLQAVKAHIDRVRLLVTRRQPDRFHAAFAEHQAVLDAVRRRDPEEAAARMAHHVEAVRGSLHLLGVVATG
>Mature_236_residues
PRVKRTLPGFDLAAALSGAQVDRALPIGPQVYDVLRRLIVLSRLPSGAPLHEADIAAALGISRTPVRAAFQQLALEGLVN
TWPQVGSVVAAVDRAKIEEGLIIRRALEGEVVRLLCAGAPDWARLDALMAAQAAAVGANDADAFFAADEAFHAALADMAG
VPQAWRLLQAVKAHIDRVRLLVTRRQPDRFHAAFAEHQAVLDAVRRRDPEEAAARMAHHVEAVRGSLHLLGVVATG

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=216, Percent_Identity=29.6296296296296, Blast_Score=107, Evalue=8e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25341; Mature: 25209

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVKRTLPGFDLAAALSGAQVDRALPIGPQVYDVLRRLIVLSRLPSGAPLHEADIAAAL
CCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GISRTPVRAAFQQLALEGLVNTWPQVGSVVAAVDRAKIEEGLIIRRALEGEVVRLLCAGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDWARLDALMAAQAAAVGANDADAFFAADEAFHAALADMAGVPQAWRLLQAVKAHIDRVR
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLVTRRQPDRFHAAFAEHQAVLDAVRRRDPEEAAARMAHHVEAVRGSLHLLGVVATG
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEEEECC
>Mature Secondary Structure 
PRVKRTLPGFDLAAALSGAQVDRALPIGPQVYDVLRRLIVLSRLPSGAPLHEADIAAAL
CCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GISRTPVRAAFQQLALEGLVNTWPQVGSVVAAVDRAKIEEGLIIRRALEGEVVRLLCAGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDWARLDALMAAQAAAVGANDADAFFAADEAFHAALADMAGVPQAWRLLQAVKAHIDRVR
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLVTRRQPDRFHAAFAEHQAVLDAVRRRDPEEAAARMAHHVEAVRGSLHLLGVVATG
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]