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The map label for this gene is yecS [H]

Identifier: 158424357

GI number: 158424357

Start: 3103054

End: 3103890

Strand: Direct

Name: yecS [H]

Synonym: AZC_2733

Alternate gene names: 158424357

Gene position: 3103054-3103890 (Clockwise)

Preceding gene: 158424356

Following gene: 158424358

Centisome position: 57.79

GC content: 65.59

Gene sequence:

>837_bases
ATGACCGGGCCTTTGCCCGACATCTCGGGCTACAGCATCGCCCCGCAGCGCCACTGGGGGCGATGGATCGCGGTTGCGGT
CATCCTGCTGCTGCTGGCCGCCCTCGCCCGCGCCTTCGCGGTGGGCATGATCGAATGGCAGTTTGTCGGCACCTTCCTCA
CCGCGCCGGTCATTCTCACGGGCCTGCTCAACACCATCGTCATGACGTTCGCGGCCATGGGTGTGGGCATCGTGCTCGGC
GTGATCACCGCCATCATGCGCATGTCGCCCAATCCGGTGCTGCGCGGTGTCGCCATGGGCTATGTCTGGCTGTTCCGGGG
GACGCCGGTCATCCTCCAGCTGCTGCTGTGGTTCAACCTCGCGCTCATCTTTCCCCGCCTCGGCATCAGCGGTTGGTGGA
CCGTGCGCACGGTGGAGGTGATGACGCCGGTGGTGGCCGCCCTCCTTGGCCTCGGCATCAATCAGGGCGCCTATACGTCG
GAAGTGGTGCGCGCGGGCCTGCTGGCGGTGGACACTGGCCAGTATGAAGCGGCGAAAGCCATCGGCATGACGCGCCTTCT
GGCGCTGCGCCGCATCGTGCTGCCGCAGGCCATGCGGGTGATCATTCCGCCACTCGGCAACGAATTCATCGGCATGGTGA
AGCTGACCTCGCTGGCGTCCGTGATCCAGTTCACGGAAATCCTGCACAGCGCGCAGAACATCTATTACGCGAACTCCCGC
GTCATCGAGCTGCTGATCGTGGCGGCCATCTGGTATCTCGCCATCGTCTCCCTCCTCACCCCGTTGCAGATGCTGCTGGA
GCGCCGGTTCGCGCGCGGCACGGCAGGTGGCCGATGA

Upstream 100 bases:

>100_bases
CGCCCACCGCCGCCCCGAGCATTACCGGCGGCTGGTGGATCAGGTCGGCGCCGTTCTCCCCGCGTGATCATGCAAGCCAA
GGAGTGACCGGAGTGCAGCG

Downstream 100 bases:

>100_bases
AACCCGCGCCCATCGTCTCCATCGTTGGTCTGGAGAAATATTTCGGCGCCTTCCAGGTGCTCCACCATGTGTCGCTTGAC
GTCCGGCCCGGCGAGGTGGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTGPLPDISGYSIAPQRHWGRWIAVAVILLLLAALARAFAVGMIEWQFVGTFLTAPVILTGLLNTIVMTFAAMGVGIVLG
VITAIMRMSPNPVLRGVAMGYVWLFRGTPVILQLLLWFNLALIFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTS
EVVRAGLLAVDTGQYEAAKAIGMTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSR
VIELLIVAAIWYLAIVSLLTPLQMLLERRFARGTAGGR

Sequences:

>Translated_278_residues
MTGPLPDISGYSIAPQRHWGRWIAVAVILLLLAALARAFAVGMIEWQFVGTFLTAPVILTGLLNTIVMTFAAMGVGIVLG
VITAIMRMSPNPVLRGVAMGYVWLFRGTPVILQLLLWFNLALIFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTS
EVVRAGLLAVDTGQYEAAKAIGMTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSR
VIELLIVAAIWYLAIVSLLTPLQMLLERRFARGTAGGR
>Mature_277_residues
TGPLPDISGYSIAPQRHWGRWIAVAVILLLLAALARAFAVGMIEWQFVGTFLTAPVILTGLLNTIVMTFAAMGVGIVLGV
ITAIMRMSPNPVLRGVAMGYVWLFRGTPVILQLLLWFNLALIFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTSE
VVRAGLLAVDTGQYEAAKAIGMTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSRV
IELLIVAAIWYLAIVSLLTPLQMLLERRFARGTAGGR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=38.0733944954128, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=31.6279069767442, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786873, Length=232, Percent_Identity=30.6034482758621, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786874, Length=225, Percent_Identity=29.7777777777778, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=29.8165137614679, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=30.4147465437788, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=29.2237442922374, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=35.8208955223881, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082239, Length=270, Percent_Identity=27.4074074074074, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787087, Length=138, Percent_Identity=31.1594202898551, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30265; Mature: 30134

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPLPDISGYSIAPQRHWGRWIAVAVILLLLAALARAFAVGMIEWQFVGTFLTAPVILT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLNTIVMTFAAMGVGIVLGVITAIMRMSPNPVLRGVAMGYVWLFRGTPVILQLLLWFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALIFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCHHHHHH
IGMTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHH
VIELLIVAAIWYLAIVSLLTPLQMLLERRFARGTAGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGPLPDISGYSIAPQRHWGRWIAVAVILLLLAALARAFAVGMIEWQFVGTFLTAPVILT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLNTIVMTFAAMGVGIVLGVITAIMRMSPNPVLRGVAMGYVWLFRGTPVILQLLLWFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALIFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCHHHHHH
IGMTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHH
VIELLIVAAIWYLAIVSLLTPLQMLLERRFARGTAGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]