| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is foxA [H]
Identifier: 158424326
GI number: 158424326
Start: 3063723
End: 3065882
Strand: Direct
Name: foxA [H]
Synonym: AZC_2702
Alternate gene names: 158424326
Gene position: 3063723-3065882 (Clockwise)
Preceding gene: 158424325
Following gene: 158424327
Centisome position: 57.05
GC content: 65.37
Gene sequence:
>2160_bases TTGAAAGGTGACACCATGCCGCCGCGCGCGCACGCCTCCCGGGCCCAAGGGGCCGTCCTCGCCCTCGCCGCCACCCTGCC GCTCGCCGATGCCGCGCGTGCCCAGTCGGCGCCCCCGGAGACCACCACCATCGCGCTGGACACGCTGGACGTGAGCGCAC AGCCGCTGGGCGACGGGCTCAATCTGCTCGTGCCCTCCATGACCGGCAGCCGCCTCGACCTGACGCCACTTCAGACGCCG TCCAGCGTGCAGATCATCCCCGGCGAGATCGCCCGTGAACGCGGCCAATATACGGTGATCGAGGCGGTGACGCAGGATGC CGCCGGCTTCAGCGCCAGCCCCGCGCCGGGCAACGGCGGCACGTCGCTCAGCACCCGCGGCTTCTCCGGCCACGGCTCGG TGATGCAGCTCTATGACGGCACGCGCCTTTACGTGGGCGCGGGAACCGTCACCTTCCCGTTCGATACCTGGTCCGCCGAG CGGATCGAGGTGCTGCGCGGCCCCGCGTCCGTTCTCTATGGCGACGGCGCCATCGGCGGCGTGGTCAATGTGGTGCCGCG CAAGCCGGACCCGCTGTCCAGTCATGGCGAGGCCCTGATGGCGGTGGATTCCCTCATGTCGGGCCGGCTGGCGCTCGATG CCACCGGCCCCATCAATGACCGCGTGTCCTACCGGTTCGACATCGCCGGCAAACTGTCCGACGGCTGGGTGGACCGGGGC GACAATGGCTCGCTCGCCGTGTCCGCGGCTGTGCGCATCCAGGCGTCGGATACGCTCGTCCTCTCGCTGAGCAATGATTA CGGCTATCAGGAGCCGCAAAAATATTTCGGGACGCCGCTCATCAACGGTCAGTTCACGGGGCTGCTGCGCAACCAGAACT ACAATGTCGGCGACGCCGCCATCAGCTATTCCGACAACTGGAGCCAGTTCAAGGCCGAATGGACACCGAGCGATGCGCTG ACCGTGCGCTCGACCTTCTACTACCTGACCAGCGACCGGCACTGGCGCGATTCCGAGACCTATGCCTTCCAGCCGGCCAC CGGCCTCGTGCGCCGCTCGGACTATATCGAGATCATGCACGACCAGAGCCAGCTCGGGAACCGCACGGACGCCACCTGGC GCGGCAGCATCCTCGGCTTCGCGAACGAGGTGGTCGTGGGCTTCGACATCAACAGCATCGACTTCACCCACACCAACAAC TCGCCCTATCGCGGCTCCTCGTCCGTGCCCCTCATCGGTTTCAATCCGGGCACGTTTGCGAGCCCCGATCCGACCGTGCC GAAATATCACACGGACACAACGCAATATTCCCTGTTCGCGGAAGATCGCCTCGTGCTCGACGAGCACTGGTCCATCGTCG GCGGGCTGCGCTGGGAGAACCCGACCATCACCCGCACCAATCTCGTCACCGCGCAGGAGGAGTTCCAGAAGTCCTATTCC GCGGTGACCGGGCGCATCGGCGTCATCTACTCACCGGTTCAGGATCTCTCGCTCTATGCCTCCTACACCACCGGCATCGA CCCGGTGGCCGGCCTCATCACGCTCTCGAGTGCCAATGCCAATTTCAACCTGACCACCGCCGAGCAGTATGAGGCCGGCA TCAAGCAGGTGTTCTGGGGCGGTCGCGGCGAGTGGACCTTCGCCGTCTACGACATCACGAAATACAACCTGCTGGCCCGC TCTTCCGCCAATTCCCAGGTGACGGAACAGATCGGCCAGCAATCCTCGCGCGGCGTCGAGGGTACGGTGTCCGTCTCCTT CCTGGAGAACTGGCGGATCTCGGCCAATCTCGCGCTGCTTGACGCCCGCTATGACAATTACATCACCACGGGCGGCATCA ACGCCACCGGCAACACGCCCGTCGGCGTGCCGGAGCAGGTGGGCAATGTCTGGCTTACCTGGAATTTCGCGCCAAAGTGG AAGACCTGGGCGGGCCTGCAATATGTGGGGCCGGTGTTCGTGAATGAGGCCAATACCGTCCAGCGGCCAGAGTATTATGT GGTCAATGGCGGGCTCCAGTGGGCCCCCACGCCGGCGGCCAACATCACGCTGCGGGTCTACAACCTGTTCGACGAGACCT ATGCGGTGGCCGGAAATACCGGCCAGTGGGTGCTCGGCCAGCCGCGCACGGTGGAACTCTCGTCCAGCGTGCGCTTCTAA
Upstream 100 bases:
>100_bases GCGTGAGGCTTCGCATCTCTTCGCTTGATCGCCACCGCTGACGCCGCGCCCCGCGCGCGGCGAACACCTTCGTCATGCCA TTTGCTGACTTTTTGCTCAC
Downstream 100 bases:
>100_bases TGGCACGGGCCCCGTCGCGCGCCCGCGTGTGGAAGGTCGTCCGGTCCTGGCTCTACAAGGTGCACCGATGGGTGGGGATC GCCGCCTGCCTGCTGTTCGC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKGDTMPPRAHASRAQGAVLALAATLPLADAARAQSAPPETTTIALDTLDVSAQPLGDGLNLLVPSMTGSRLDLTPLQTP SSVQIIPGEIARERGQYTVIEAVTQDAAGFSASPAPGNGGTSLSTRGFSGHGSVMQLYDGTRLYVGAGTVTFPFDTWSAE RIEVLRGPASVLYGDGAIGGVVNVVPRKPDPLSSHGEALMAVDSLMSGRLALDATGPINDRVSYRFDIAGKLSDGWVDRG DNGSLAVSAAVRIQASDTLVLSLSNDYGYQEPQKYFGTPLINGQFTGLLRNQNYNVGDAAISYSDNWSQFKAEWTPSDAL TVRSTFYYLTSDRHWRDSETYAFQPATGLVRRSDYIEIMHDQSQLGNRTDATWRGSILGFANEVVVGFDINSIDFTHTNN SPYRGSSSVPLIGFNPGTFASPDPTVPKYHTDTTQYSLFAEDRLVLDEHWSIVGGLRWENPTITRTNLVTAQEEFQKSYS AVTGRIGVIYSPVQDLSLYASYTTGIDPVAGLITLSSANANFNLTTAEQYEAGIKQVFWGGRGEWTFAVYDITKYNLLAR SSANSQVTEQIGQQSSRGVEGTVSVSFLENWRISANLALLDARYDNYITTGGINATGNTPVGVPEQVGNVWLTWNFAPKW KTWAGLQYVGPVFVNEANTVQRPEYYVVNGGLQWAPTPAANITLRVYNLFDETYAVAGNTGQWVLGQPRTVELSSSVRF
Sequences:
>Translated_719_residues MKGDTMPPRAHASRAQGAVLALAATLPLADAARAQSAPPETTTIALDTLDVSAQPLGDGLNLLVPSMTGSRLDLTPLQTP SSVQIIPGEIARERGQYTVIEAVTQDAAGFSASPAPGNGGTSLSTRGFSGHGSVMQLYDGTRLYVGAGTVTFPFDTWSAE RIEVLRGPASVLYGDGAIGGVVNVVPRKPDPLSSHGEALMAVDSLMSGRLALDATGPINDRVSYRFDIAGKLSDGWVDRG DNGSLAVSAAVRIQASDTLVLSLSNDYGYQEPQKYFGTPLINGQFTGLLRNQNYNVGDAAISYSDNWSQFKAEWTPSDAL TVRSTFYYLTSDRHWRDSETYAFQPATGLVRRSDYIEIMHDQSQLGNRTDATWRGSILGFANEVVVGFDINSIDFTHTNN SPYRGSSSVPLIGFNPGTFASPDPTVPKYHTDTTQYSLFAEDRLVLDEHWSIVGGLRWENPTITRTNLVTAQEEFQKSYS AVTGRIGVIYSPVQDLSLYASYTTGIDPVAGLITLSSANANFNLTTAEQYEAGIKQVFWGGRGEWTFAVYDITKYNLLAR SSANSQVTEQIGQQSSRGVEGTVSVSFLENWRISANLALLDARYDNYITTGGINATGNTPVGVPEQVGNVWLTWNFAPKW KTWAGLQYVGPVFVNEANTVQRPEYYVVNGGLQWAPTPAANITLRVYNLFDETYAVAGNTGQWVLGQPRTVELSSSVRF >Mature_719_residues MKGDTMPPRAHASRAQGAVLALAATLPLADAARAQSAPPETTTIALDTLDVSAQPLGDGLNLLVPSMTGSRLDLTPLQTP SSVQIIPGEIARERGQYTVIEAVTQDAAGFSASPAPGNGGTSLSTRGFSGHGSVMQLYDGTRLYVGAGTVTFPFDTWSAE RIEVLRGPASVLYGDGAIGGVVNVVPRKPDPLSSHGEALMAVDSLMSGRLALDATGPINDRVSYRFDIAGKLSDGWVDRG DNGSLAVSAAVRIQASDTLVLSLSNDYGYQEPQKYFGTPLINGQFTGLLRNQNYNVGDAAISYSDNWSQFKAEWTPSDAL TVRSTFYYLTSDRHWRDSETYAFQPATGLVRRSDYIEIMHDQSQLGNRTDATWRGSILGFANEVVVGFDINSIDFTHTNN SPYRGSSSVPLIGFNPGTFASPDPTVPKYHTDTTQYSLFAEDRLVLDEHWSIVGGLRWENPTITRTNLVTAQEEFQKSYS AVTGRIGVIYSPVQDLSLYASYTTGIDPVAGLITLSSANANFNLTTAEQYEAGIKQVFWGGRGEWTFAVYDITKYNLLAR SSANSQVTEQIGQQSSRGVEGTVSVSFLENWRISANLALLDARYDNYITTGGINATGNTPVGVPEQVGNVWLTWNFAPKW KTWAGLQYVGPVFVNEANTVQRPEYYVVNGGLQWAPTPAANITLRVYNLFDETYAVAGNTGQWVLGQPRTVELSSSVRF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=779, Percent_Identity=23.7483953786906, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77868; Mature: 77868
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDTMPPRAHASRAQGAVLALAATLPLADAARAQSAPPETTTIALDTLDVSAQPLGDGL CCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCC NLLVPSMTGSRLDLTPLQTPSSVQIIPGEIARERGQYTVIEAVTQDAAGFSASPAPGNGG EEEEECCCCCEEEECCCCCCCCEEEECCHHHHCCCCEEEEEEEHHCCCCCCCCCCCCCCC TSLSTRGFSGHGSVMQLYDGTRLYVGAGTVTFPFDTWSAERIEVLRGPASVLYGDGAIGG CCEEECCCCCCCCEEEEECCCEEEEECCEEEEECCCCCCHHHHEECCCCCEEECCCCCCC VVNVVPRKPDPLSSHGEALMAVDSLMSGRLALDATGPINDRVSYRFDIAGKLSDGWVDRG EEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCC DNGSLAVSAAVRIQASDTLVLSLSNDYGYQEPQKYFGTPLINGQFTGLLRNQNYNVGDAA CCCCEEEEEEEEEEECCEEEEEECCCCCCCCCHHHHCCCEECCEEEEEEECCCCCCCCEE ISYSDNWSQFKAEWTPSDALTVRSTFYYLTSDRHWRDSETYAFQPATGLVRRSDYIEIMH EEECCCCHHEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCCCEECCCEEEEEE DQSQLGNRTDATWRGSILGFANEVVVGFDINSIDFTHTNNSPYRGSSSVPLIGFNPGTFA CHHHCCCCCCCEECCEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCC SPDPTVPKYHTDTTQYSLFAEDRLVLDEHWSIVGGLRWENPTITRTNLVTAQEEFQKSYS CCCCCCCCEECCCCEEEEEECCEEEEECCCEEEECEEECCCCEEEEEEEECHHHHHHHHH AVTGRIGVIYSPVQDLSLYASYTTGIDPVAGLITLSSANANFNLTTAEQYEAGIKQVFWG HHCCCEEEEECCCHHHEEEEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHCHHHEEEC GRGEWTFAVYDITKYNLLARSSANSQVTEQIGQQSSRGVEGTVSVSFLENWRISANLALL CCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEEE DARYDNYITTGGINATGNTPVGVPEQVGNVWLTWNFAPKWKTWAGLQYVGPVFVNEANTV EECCCCEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCEEECEEEEECCCCC QRPEYYVVNGGLQWAPTPAANITLRVYNLFDETYAVAGNTGQWVLGQPRTVELSSSVRF CCCCEEEEECCCEECCCCCCEEEEEEEEECCCEEEEECCCCCEEECCCEEEEECCCCCC >Mature Secondary Structure MKGDTMPPRAHASRAQGAVLALAATLPLADAARAQSAPPETTTIALDTLDVSAQPLGDGL CCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCC NLLVPSMTGSRLDLTPLQTPSSVQIIPGEIARERGQYTVIEAVTQDAAGFSASPAPGNGG EEEEECCCCCEEEECCCCCCCCEEEECCHHHHCCCCEEEEEEEHHCCCCCCCCCCCCCCC TSLSTRGFSGHGSVMQLYDGTRLYVGAGTVTFPFDTWSAERIEVLRGPASVLYGDGAIGG CCEEECCCCCCCCEEEEECCCEEEEECCEEEEECCCCCCHHHHEECCCCCEEECCCCCCC VVNVVPRKPDPLSSHGEALMAVDSLMSGRLALDATGPINDRVSYRFDIAGKLSDGWVDRG EEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCC DNGSLAVSAAVRIQASDTLVLSLSNDYGYQEPQKYFGTPLINGQFTGLLRNQNYNVGDAA CCCCEEEEEEEEEEECCEEEEEECCCCCCCCCHHHHCCCEECCEEEEEEECCCCCCCCEE ISYSDNWSQFKAEWTPSDALTVRSTFYYLTSDRHWRDSETYAFQPATGLVRRSDYIEIMH EEECCCCHHEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCCCEECCCEEEEEE DQSQLGNRTDATWRGSILGFANEVVVGFDINSIDFTHTNNSPYRGSSSVPLIGFNPGTFA CHHHCCCCCCCEECCEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCC SPDPTVPKYHTDTTQYSLFAEDRLVLDEHWSIVGGLRWENPTITRTNLVTAQEEFQKSYS CCCCCCCCEECCCCEEEEEECCEEEEECCCEEEECEEECCCCEEEEEEEECHHHHHHHHH AVTGRIGVIYSPVQDLSLYASYTTGIDPVAGLITLSSANANFNLTTAEQYEAGIKQVFWG HHCCCEEEEECCCHHHEEEEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHCHHHEEEC GRGEWTFAVYDITKYNLLARSSANSQVTEQIGQQSSRGVEGTVSVSFLENWRISANLALL CCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEEE DARYDNYITTGGINATGNTPVGVPEQVGNVWLTWNFAPKWKTWAGLQYVGPVFVNEANTV EECCCCEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCEEECEEEEECCCCC QRPEYYVVNGGLQWAPTPAANITLRVYNLFDETYAVAGNTGQWVLGQPRTVELSSSVRF CCCCEEEEECCCEECCCCCCEEEEEEEEECCCEEEEECCCCCEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]