| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424327
Identifier: 158424327
GI number: 158424327
Start: 3065882
End: 3067390
Strand: Direct
Name: 158424327
Synonym: AZC_2703
Alternate gene names: NA
Gene position: 3065882-3067390 (Clockwise)
Preceding gene: 158424326
Following gene: 158424328
Centisome position: 57.1
GC content: 69.98
Gene sequence:
>1509_bases ATGGCACGGGCCCCGTCGCGCGCCCGCGTGTGGAAGGTCGTCCGGTCCTGGCTCTACAAGGTGCACCGATGGGTGGGGAT CGCCGCCTGCCTGCTGTTCGCCATGTGGTTCGCCTCCGGTGTGGTGATGATGTACGTGCCCTTCCCGTCGCTGTCCGAAC GGGCGCGCCGGGAGGCTCTCCCGTCCATCGACTGGTCGGCTGTGAAGATCACCCCGGCGGAGGTGACGCATGCACTCGGC GCACCACCCCGCGACCTTCTCCTGCACATGCGCGGCACGGAGCCCGTCTATCGGGCGGTGCGGAGCGACGGGACGCTGAG CGTGCTCTCCGCCCGCACCGGCGACATGCTCCCACCGGTGGACGGGCCGCAGGCCCTTGCCCTTGTCCGTGCTGGCCGCG GCGGGGCCGAGGCCCGGCTCGTCGAAACGCTTGCGCGCGATCAATGGACCGTGCCGCAATCCTACGATCCCCATCGCCCC CTGCATCTGGTGGCGCTGGAGGACGCGGCCGGCACACGCCTCCACATCTCCTCCCGGACAGGCGAGATCGTGCTACGCAC GACGCGGGCCGAACGCTTCTGGAACTGGTTCGGCGCCGTCCCGCACTGGATCTATGTCACGCCCCTGCGCCAGAACGGGA CGCTCTGGGCCAATGTGGTGCTCTGGATCTCCGGCCTGTCCCTGGCGGTCGCCGTGACCGGTCTCTGGATCGGCCTGCTG CGGGCAAAGCTCGGGCGGACGCGCTATGCGGGCGGGCGGGTGTCCCCCTATCGCGGCTGGATGCTCTGGCATCACGTGGC GGGGCTGGCGGGCGGCCTCGCCGTTCTCACCTTTCTCTTCTCAGGCTGGATGTCGCTCAATCCGGGCAACGCCTTCGCCC GCTCGCCCTTGTCACCGGCTCAGATGGCGGCATTCGAGGGGGCAGACGGCCGGGCCTTTCCGGGCGATCCTGCACAGATC GCACCGCGTACGCTGCCGCAGGCCGTCGAGGCGCGGGTGACGTGGTTCGCCGGCCGGCCCCTCCTGCTGCTGGCCGATGG CCGCTCGCGCCTCACTTTGGTGGATGCCGAAGGCAGTCCGGTTTTGCTCTCGGATGCCGACATTGCAGCGGCCGCGCCTC TCCTGCGGCCCGGCACACCGATCCTTCAGGTGACGCGCCTCACCGAAGCGGACGCCTATTGGTACAGCCACCACCGCGAG AGGCCGCTGCCCGTGGTGCGTATCGTGTTCGGCGACGCGCAGCAAAGCTGGGTGCACGTGGACCCGGCAACCGGACGGAT CGTCGGCAGCAGCACCGCCAGCCTGCGGCTGTACCGCTGGCTCTATAACGGGCTGCACAGCCTCGACCTGCCGCTGCTTC TGCGCCATCGCCCGGTCTGGGATGGGGTGATGCTGGCGCTCTGCGCCGCCGGGATGATCATCAGCGTCAGCGGCATTGTC ATCGGCTTGCGCCGGCTCACCCGCCGCAAGCCTGCCGCGCGACGGCCGGAAGCCGGCTCGGCAAGCTGA
Upstream 100 bases:
>100_bases ACAACCTGTTCGACGAGACCTATGCGGTGGCCGGAAATACCGGCCAGTGGGTGCTCGGCCAGCCGCGCACGGTGGAACTC TCGTCCAGCGTGCGCTTCTA
Downstream 100 bases:
>100_bases GGCTTCACTATTTCGCGCTGGAGCCCGCCGGGCCGTGTGAAAGTTCCAAGCATCATGCGATGCGACAAGAAGGCTCGCGC AAACGGCGGCAGTTTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix; Na+/Proline Symporter; PepSY-Associated TM Helix Family; Transmembrane Protein; Pepsy-Associated Tm Helix Domain Protein
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MARAPSRARVWKVVRSWLYKVHRWVGIAACLLFAMWFASGVVMMYVPFPSLSERARREALPSIDWSAVKITPAEVTHALG APPRDLLLHMRGTEPVYRAVRSDGTLSVLSARTGDMLPPVDGPQALALVRAGRGGAEARLVETLARDQWTVPQSYDPHRP LHLVALEDAAGTRLHISSRTGEIVLRTTRAERFWNWFGAVPHWIYVTPLRQNGTLWANVVLWISGLSLAVAVTGLWIGLL RAKLGRTRYAGGRVSPYRGWMLWHHVAGLAGGLAVLTFLFSGWMSLNPGNAFARSPLSPAQMAAFEGADGRAFPGDPAQI APRTLPQAVEARVTWFAGRPLLLLADGRSRLTLVDAEGSPVLLSDADIAAAAPLLRPGTPILQVTRLTEADAYWYSHHRE RPLPVVRIVFGDAQQSWVHVDPATGRIVGSSTASLRLYRWLYNGLHSLDLPLLLRHRPVWDGVMLALCAAGMIISVSGIV IGLRRLTRRKPAARRPEAGSAS
Sequences:
>Translated_502_residues MARAPSRARVWKVVRSWLYKVHRWVGIAACLLFAMWFASGVVMMYVPFPSLSERARREALPSIDWSAVKITPAEVTHALG APPRDLLLHMRGTEPVYRAVRSDGTLSVLSARTGDMLPPVDGPQALALVRAGRGGAEARLVETLARDQWTVPQSYDPHRP LHLVALEDAAGTRLHISSRTGEIVLRTTRAERFWNWFGAVPHWIYVTPLRQNGTLWANVVLWISGLSLAVAVTGLWIGLL RAKLGRTRYAGGRVSPYRGWMLWHHVAGLAGGLAVLTFLFSGWMSLNPGNAFARSPLSPAQMAAFEGADGRAFPGDPAQI APRTLPQAVEARVTWFAGRPLLLLADGRSRLTLVDAEGSPVLLSDADIAAAAPLLRPGTPILQVTRLTEADAYWYSHHRE RPLPVVRIVFGDAQQSWVHVDPATGRIVGSSTASLRLYRWLYNGLHSLDLPLLLRHRPVWDGVMLALCAAGMIISVSGIV IGLRRLTRRKPAARRPEAGSAS >Mature_501_residues ARAPSRARVWKVVRSWLYKVHRWVGIAACLLFAMWFASGVVMMYVPFPSLSERARREALPSIDWSAVKITPAEVTHALGA PPRDLLLHMRGTEPVYRAVRSDGTLSVLSARTGDMLPPVDGPQALALVRAGRGGAEARLVETLARDQWTVPQSYDPHRPL HLVALEDAAGTRLHISSRTGEIVLRTTRAERFWNWFGAVPHWIYVTPLRQNGTLWANVVLWISGLSLAVAVTGLWIGLLR AKLGRTRYAGGRVSPYRGWMLWHHVAGLAGGLAVLTFLFSGWMSLNPGNAFARSPLSPAQMAAFEGADGRAFPGDPAQIA PRTLPQAVEARVTWFAGRPLLLLADGRSRLTLVDAEGSPVLLSDADIAAAAPLLRPGTPILQVTRLTEADAYWYSHHRER PLPVVRIVFGDAQQSWVHVDPATGRIVGSSTASLRLYRWLYNGLHSLDLPLLLRHRPVWDGVMLALCAAGMIISVSGIVI GLRRLTRRKPAARRPEAGSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55068; Mature: 54936
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAPSRARVWKVVRSWLYKVHRWVGIAACLLFAMWFASGVVMMYVPFPSLSERARREAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCC PSIDWSAVKITPAEVTHALGAPPRDLLLHMRGTEPVYRAVRSDGTLSVLSARTGDMLPPV CCCCCCEEEEEHHHHHHHHCCCHHHHEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCC DGPQALALVRAGRGGAEARLVETLARDQWTVPQSYDPHRPLHLVALEDAAGTRLHISSRT CCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC GEIVLRTTRAERFWNWFGAVPHWIYVTPLRQNGTLWANVVLWISGLSLAVAVTGLWIGLL CEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAKLGRTRYAGGRVSPYRGWMLWHHVAGLAGGLAVLTFLFSGWMSLNPGNAFARSPLSPA HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHH QMAAFEGADGRAFPGDPAQIAPRTLPQAVEARVTWFAGRPLLLLADGRSRLTLVDAEGSP HHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEECCCCE VLLSDADIAAAAPLLRPGTPILQVTRLTEADAYWYSHHRERPLPVVRIVFGDAQQSWVHV EEEECCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE DPATGRIVGSSTASLRLYRWLYNGLHSLDLPLLLRHRPVWDGVMLALCAAGMIISVSGIV CCCCCEEEECCCHHHHHHHHHHHCHHHCCCHHHHHCCCCHHHHHHHHHHCCHHEEHHHHH IGLRRLTRRKPAARRPEAGSAS HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ARAPSRARVWKVVRSWLYKVHRWVGIAACLLFAMWFASGVVMMYVPFPSLSERARREAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCC PSIDWSAVKITPAEVTHALGAPPRDLLLHMRGTEPVYRAVRSDGTLSVLSARTGDMLPPV CCCCCCEEEEEHHHHHHHHCCCHHHHEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCC DGPQALALVRAGRGGAEARLVETLARDQWTVPQSYDPHRPLHLVALEDAAGTRLHISSRT CCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC GEIVLRTTRAERFWNWFGAVPHWIYVTPLRQNGTLWANVVLWISGLSLAVAVTGLWIGLL CEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAKLGRTRYAGGRVSPYRGWMLWHHVAGLAGGLAVLTFLFSGWMSLNPGNAFARSPLSPA HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHH QMAAFEGADGRAFPGDPAQIAPRTLPQAVEARVTWFAGRPLLLLADGRSRLTLVDAEGSP HHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEECCCCE VLLSDADIAAAAPLLRPGTPILQVTRLTEADAYWYSHHRERPLPVVRIVFGDAQQSWVHV EEEECCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE DPATGRIVGSSTASLRLYRWLYNGLHSLDLPLLLRHRPVWDGVMLALCAAGMIISVSGIV CCCCCEEEECCCHHHHHHHHHHHCHHHCCCHHHHHCCCCHHHHHHHHHHCCHHEEHHHHH IGLRRLTRRKPAARRPEAGSAS HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA