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The map label for this gene is lacI [C]

Identifier: 158424315

GI number: 158424315

Start: 3050519

End: 3051568

Strand: Direct

Name: lacI [C]

Synonym: AZC_2691

Alternate gene names: 158424315

Gene position: 3050519-3051568 (Clockwise)

Preceding gene: 158424309

Following gene: 158424316

Centisome position: 56.81

GC content: 67.62

Gene sequence:

>1050_bases
TTGATGTCTTCCGATGTGTCCGCATCAGATCGCTCCATCCACGCCCGCTTGCCGGATGTGGCGCGCCGCGCCGGCGTTTC
CACGGCGACGGTGGACCGCGTCCTCAACAAGCGGCCGGGGGTGCGGCCCGTCACCATCCAAAGGGTGCTGAAGGCGGCGG
CCGAGCTCAACTACATCCTCGAAAGCGATTTCGCCCCGCCCGTCGCGCCGCTGCGGCTCGTCATCCTGCTGCCAGCGGGC
ACCAACCGCTTCCTCGGACTGCTCGGCCGGCTCATCGCATCAAGTTCTGCCACGCTCGCGGAGCGGCAGATCCAGGCGCG
GGTCGAATATATCAAGAGCTTCAATCCGGAGCTTCTGGCCCGCGCCCTGCTCCAGCACGGCAAGAGCGCGGATGGGATCG
CCTTCATGGCGCTGGAGCACCCGGCGGTGCGCGAGGCGGTGAACACGCTTGCCGCCCGTGGCGTGCCCACCGTCACGCTC
ATTTCCGATATTGCCGGCACGCGCCGCGTGGCGAGCGTCGGTCTCGACAACCGCTCGGCGGGGCGCACGGCGGGCTATCT
CATCGCCCGCTTCATCGGCGCGCGTAAGGCCAAGGTGGCGATGATCGCCGGCTCCCTCTCCTATCGCGCCCATGAGGAGC
GCGAGATGGGCTTTCTGCACCTGTTCGAGGAGATGTTCCCGCAGATCGAGGTGGTCGGCCTGCGCGAGGGGCAGGACGAC
GAGGCGCAGAATTACCGCCAGACCCGGCAGTTCCTGGCCCAACACCCCGATCTCGCCGGCCTCTACAACATCGGCGGCGG
CGCGGCCGGCGTCGGCAAGGCGCTGCGGGAGATGCGCCGCTCGGACGTGGTGTTCGTCGGCCACGGCCTCACCCCGGATA
CACGTGCGCTGCTGCTCGACGGCACCATGGATGCGGTCATCACGCAGAATCCGGAGAACGCCATCCAGAGCGTGATTGGC
GTCTTCTCCAACCTGCGGGCCGGACGGGAGGCGACAGACGGCATCGTTACGCCCCGCATCGAGATCGTGCTGCGGGAAAA
CCTGCCTTAA

Upstream 100 bases:

>100_bases
GCATGGCATCCTCCCTTGATGTTTTTTGATGTATCTTTCTTGATCCTGAGAGAGGATAAAAACCTGAACCGCGCCCGGCA
ATTTCAAATAATGATGTAAT

Downstream 100 bases:

>100_bases
GCGCCTTTCCGATTGGTCCGGTGCAGGAGAGCCCCATTGGACCTATCAGCGATCCATTTTCGCGATCATCTTCCGCGCCG
CTTGTTCCCGCGCCATCGCG

Product: regulatory protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; Sugar ABC Transporter; Regulatory Protein LacI Family; LacI Regulatory Protein; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Ribose ABC Transporter; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; Regulatory Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MMSSDVSASDRSIHARLPDVARRAGVSTATVDRVLNKRPGVRPVTIQRVLKAAAELNYILESDFAPPVAPLRLVILLPAG
TNRFLGLLGRLIASSSATLAERQIQARVEYIKSFNPELLARALLQHGKSADGIAFMALEHPAVREAVNTLAARGVPTVTL
ISDIAGTRRVASVGLDNRSAGRTAGYLIARFIGARKAKVAMIAGSLSYRAHEEREMGFLHLFEEMFPQIEVVGLREGQDD
EAQNYRQTRQFLAQHPDLAGLYNIGGGAAGVGKALREMRRSDVVFVGHGLTPDTRALLLDGTMDAVITQNPENAIQSVIG
VFSNLRAGREATDGIVTPRIEIVLRENLP

Sequences:

>Translated_349_residues
MMSSDVSASDRSIHARLPDVARRAGVSTATVDRVLNKRPGVRPVTIQRVLKAAAELNYILESDFAPPVAPLRLVILLPAG
TNRFLGLLGRLIASSSATLAERQIQARVEYIKSFNPELLARALLQHGKSADGIAFMALEHPAVREAVNTLAARGVPTVTL
ISDIAGTRRVASVGLDNRSAGRTAGYLIARFIGARKAKVAMIAGSLSYRAHEEREMGFLHLFEEMFPQIEVVGLREGQDD
EAQNYRQTRQFLAQHPDLAGLYNIGGGAAGVGKALREMRRSDVVFVGHGLTPDTRALLLDGTMDAVITQNPENAIQSVIG
VFSNLRAGREATDGIVTPRIEIVLRENLP
>Mature_349_residues
MMSSDVSASDRSIHARLPDVARRAGVSTATVDRVLNKRPGVRPVTIQRVLKAAAELNYILESDFAPPVAPLRLVILLPAG
TNRFLGLLGRLIASSSATLAERQIQARVEYIKSFNPELLARALLQHGKSADGIAFMALEHPAVREAVNTLAARGVPTVTL
ISDIAGTRRVASVGLDNRSAGRTAGYLIARFIGARKAKVAMIAGSLSYRAHEEREMGFLHLFEEMFPQIEVVGLREGQDD
EAQNYRQTRQFLAQHPDLAGLYNIGGGAAGVGKALREMRRSDVVFVGHGLTPDTRALLLDGTMDAVITQNPENAIQSVIG
VFSNLRAGREATDGIVTPRIEIVLRENLP

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37739; Mature: 37739

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSDVSASDRSIHARLPDVARRAGVSTATVDRVLNKRPGVRPVTIQRVLKAAAELNYIL
CCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ESDFAPPVAPLRLVILLPAGTNRFLGLLGRLIASSSATLAERQIQARVEYIKSFNPELLA
HCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
RALLQHGKSADGIAFMALEHPAVREAVNTLAARGVPTVTLISDIAGTRRVASVGLDNRSA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GRTAGYLIARFIGARKAKVAMIAGSLSYRAHEEREMGFLHLFEEMFPQIEVVGLREGQDD
CHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
EAQNYRQTRQFLAQHPDLAGLYNIGGGAAGVGKALREMRRSDVVFVGHGLTPDTRALLLD
HHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEC
GTMDAVITQNPENAIQSVIGVFSNLRAGREATDGIVTPRIEIVLRENLP
CCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MMSSDVSASDRSIHARLPDVARRAGVSTATVDRVLNKRPGVRPVTIQRVLKAAAELNYIL
CCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ESDFAPPVAPLRLVILLPAGTNRFLGLLGRLIASSSATLAERQIQARVEYIKSFNPELLA
HCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
RALLQHGKSADGIAFMALEHPAVREAVNTLAARGVPTVTLISDIAGTRRVASVGLDNRSA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GRTAGYLIARFIGARKAKVAMIAGSLSYRAHEEREMGFLHLFEEMFPQIEVVGLREGQDD
CHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
EAQNYRQTRQFLAQHPDLAGLYNIGGGAAGVGKALREMRRSDVVFVGHGLTPDTRALLLD
HHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEC
GTMDAVITQNPENAIQSVIGVFSNLRAGREATDGIVTPRIEIVLRENLP
CCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA