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The map label for this gene is gntR [C]

Identifier: 158424299

GI number: 158424299

Start: 3034921

End: 3035598

Strand: Direct

Name: gntR [C]

Synonym: AZC_2675

Alternate gene names: 158424299

Gene position: 3034921-3035598 (Clockwise)

Preceding gene: 158424298

Following gene: 158424300

Centisome position: 56.52

GC content: 67.7

Gene sequence:

>678_bases
ATGAGCGACACCGGCACAGACGAGGTTCAGGGCCGCGAGGGCGGGCGGATTGGCGGGATCAACCTCTCGAATCTCGCCTA
TAACGCGGTCTCCGAGATGATCCGCCACCGCCGCCTGCGCGGGGGCGAGGTCATCGTGGAGCAGCGTCTGGCCGAAACGC
TGGGCATCTCCCGCACGCCGCTGCGGGAGGCCTTGCAGCGCCTCGAAGGCGAGGGTCTCGTGATCAAGGGCACGGGCCGC
TCCTTCCTGGTGCGGCACGTGGACCTCAAGGAATATCTTCAGAGCCTCAAGGTCCGCGAGATTCTCGAGCCCGAGGCGGC
GGCGCTCGCCGCCGGCCGCATCCCGCTCGGGGAACTCGCCAGCGTGCGCGCAGAGATCAACGCCCTGCGTACCGCCGTGC
CCTACCACACGGACGCCCACTGGCGTTCGGACGACAATCTGCACGAGCTTTATGCGCGCAACTGCGGCAATCAGGTGCTG
GCGGGCATGATCCGGACCCTGCGCGTCACCACGCGCCTGTTCGAGATTTCGAGCCTCGCGGACCGGCTGGAGGCCGATTC
GGCCGAACATCTCCAGATCGTCGAAGCGCTGGAGCAGGATGACGCCAAGGCCGCCCGCCGCACGGTCGCCCACCATCTGC
GCAGCCTCGGCAAGCACACCATCGACACGGTGCGATAG

Upstream 100 bases:

>100_bases
GTGGTGGGGCAGAAGGGACTCGGCCAGCACCTTTCGCGTGCCAAGTCGCCCTTCGCGGTCCAGCGCGATCCCGTAGCCTC
GTGACGCAGGAACGCTTGGC

Downstream 100 bases:

>100_bases
CTTCGCACCTCGCCGGCCTTTCAGATGGCGCCACAGTGGGTGCGAGAAAACGCGGATCGTTCTTCAGTCAAAACCTTTAT
CTACCGGGGCTTTCGGCCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator Protein; Transcriptional Regulator; FCD Domain Protein; GntR Family Regulatory Protein; GntR-Family Transcriptional Regulator; NTA Operon Transcriptional Regulator Related Protein; Transcriptional Regulator GNTR Family

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSDTGTDEVQGREGGRIGGINLSNLAYNAVSEMIRHRRLRGGEVIVEQRLAETLGISRTPLREALQRLEGEGLVIKGTGR
SFLVRHVDLKEYLQSLKVREILEPEAAALAAGRIPLGELASVRAEINALRTAVPYHTDAHWRSDDNLHELYARNCGNQVL
AGMIRTLRVTTRLFEISSLADRLEADSAEHLQIVEALEQDDAKAARRTVAHHLRSLGKHTIDTVR

Sequences:

>Translated_225_residues
MSDTGTDEVQGREGGRIGGINLSNLAYNAVSEMIRHRRLRGGEVIVEQRLAETLGISRTPLREALQRLEGEGLVIKGTGR
SFLVRHVDLKEYLQSLKVREILEPEAAALAAGRIPLGELASVRAEINALRTAVPYHTDAHWRSDDNLHELYARNCGNQVL
AGMIRTLRVTTRLFEISSLADRLEADSAEHLQIVEALEQDDAKAARRTVAHHLRSLGKHTIDTVR
>Mature_224_residues
SDTGTDEVQGREGGRIGGINLSNLAYNAVSEMIRHRRLRGGEVIVEQRLAETLGISRTPLREALQRLEGEGLVIKGTGRS
FLVRHVDLKEYLQSLKVREILEPEAAALAAGRIPLGELASVRAEINALRTAVPYHTDAHWRSDDNLHELYARNCGNQVLA
GMIRTLRVTTRLFEISSLADRLEADSAEHLQIVEALEQDDAKAARRTVAHHLRSLGKHTIDTVR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24978; Mature: 24847

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTGTDEVQGREGGRIGGINLSNLAYNAVSEMIRHRRLRGGEVIVEQRLAETLGISRTP
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
LREALQRLEGEGLVIKGTGRSFLVRHVDLKEYLQSLKVREILEPEAAALAAGRIPLGELA
HHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
SVRAEINALRTAVPYHTDAHWRSDDNLHELYARNCGNQVLAGMIRTLRVTTRLFEISSLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DRLEADSAEHLQIVEALEQDDAKAARRTVAHHLRSLGKHTIDTVR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDTGTDEVQGREGGRIGGINLSNLAYNAVSEMIRHRRLRGGEVIVEQRLAETLGISRTP
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
LREALQRLEGEGLVIKGTGRSFLVRHVDLKEYLQSLKVREILEPEAAALAAGRIPLGELA
HHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
SVRAEINALRTAVPYHTDAHWRSDDNLHELYARNCGNQVLAGMIRTLRVTTRLFEISSLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DRLEADSAEHLQIVEALEQDDAKAARRTVAHHLRSLGKHTIDTVR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA