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The map label for this gene is tetR [C]

Identifier: 158424281

GI number: 158424281

Start: 3010246

End: 3011052

Strand: Reverse

Name: tetR [C]

Synonym: AZC_2657

Alternate gene names: 158424281

Gene position: 3011052-3010246 (Counterclockwise)

Preceding gene: 158424290

Following gene: 158424272

Centisome position: 56.07

GC content: 69.27

Gene sequence:

>807_bases
ATGAGCGCGTCCGATCCGGCGGAGCAGAAGAGCGAGGTCGCCCGGCCGCGCCTGCAGAAGCCACGTCGCGCTGCCGCCGC
TCCACGCGAGGAACGCGACGGGGAACCGAGGCTGCGCATTCTCGCCGCCGCCGAAGCCGTGTTCGCCACGCGCGGATTCG
ATGCCGCCACCCTGCGCGAGATCACAGAAGCCGCGGGCGTGAACATCGCCGCAGTGAACTATTATTTCAGCTCCAAGGAC
GAGCTCGTCAGGCAGGTCCTCGACCGGCGCATGACCCCCTATACCGCCGCCCGCGCGGCCGCGCTCGAGGCGCTGGTCGC
GGCGGCTGGCGGGAAGGCGCTGAAGATCGCCGAGATCATCGAGGTGATGGTCCGGCCCATCGTCGAACTGAGCCGCGATG
ACAATGGCGGACGCTCGCTCATCCGCTTGCTGTTGCAGGTCCGCGCGCGACCGAGCGAGGACACGATCCGCGTCTTCGTG
GACCGGGTGGACCCGCTGGTGCACCGCTTTGTCCGGGTCATTCAGGATGCCGCCCCGCATCTGTCGCGGGCGGACATCTA
CTGGCGCTACAATTTCTCCATCGGCGCGGTGATGCAGGTGCTGACCGACGCCGACCCCACCTCCCTGCGTCTCAAGCGCC
AGTCGGGCGGCCTGTGCGACACGCAGGACGATGAAGCCATCGTCCGCGAGCTGGTGGCCTTCATCGCGGCTGGCTTCGCT
GGGCCCGGCATGCCGGCGGTTCAGAGCCTTACGGCGGCCGCGAGGAGTGATGCGGCGGCGCCGCGCCGGGCACGGGTCCG
CAGTTAG

Upstream 100 bases:

>100_bases
GGCGCTATGGGCGAGGCGGCCGCGGAGGAAGCCGTGTCGGTTGCCCCAACCGGATGATCCTGCTTAAGTCCTTGCGAGCG
AGGGCATCAGCGAGGAAGGG

Downstream 100 bases:

>100_bases
ATTTTCCCGCGGCCTCTTAGAGCCCGTTTGGAAATTCACGGATGGGCATTTCTTCGGGCAAGATTTCCGCCCATCGCGAC
GAGGATCATCGCCGTTGAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PsrA; Regulatory Protein TetR; Transcription Regulator Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSASDPAEQKSEVARPRLQKPRRAAAAPREERDGEPRLRILAAAEAVFATRGFDAATLREITEAAGVNIAAVNYYFSSKD
ELVRQVLDRRMTPYTAARAAALEALVAAAGGKALKIAEIIEVMVRPIVELSRDDNGGRSLIRLLLQVRARPSEDTIRVFV
DRVDPLVHRFVRVIQDAAPHLSRADIYWRYNFSIGAVMQVLTDADPTSLRLKRQSGGLCDTQDDEAIVRELVAFIAAGFA
GPGMPAVQSLTAAARSDAAAPRRARVRS

Sequences:

>Translated_268_residues
MSASDPAEQKSEVARPRLQKPRRAAAAPREERDGEPRLRILAAAEAVFATRGFDAATLREITEAAGVNIAAVNYYFSSKD
ELVRQVLDRRMTPYTAARAAALEALVAAAGGKALKIAEIIEVMVRPIVELSRDDNGGRSLIRLLLQVRARPSEDTIRVFV
DRVDPLVHRFVRVIQDAAPHLSRADIYWRYNFSIGAVMQVLTDADPTSLRLKRQSGGLCDTQDDEAIVRELVAFIAAGFA
GPGMPAVQSLTAAARSDAAAPRRARVRS
>Mature_267_residues
SASDPAEQKSEVARPRLQKPRRAAAAPREERDGEPRLRILAAAEAVFATRGFDAATLREITEAAGVNIAAVNYYFSSKDE
LVRQVLDRRMTPYTAARAAALEALVAAAGGKALKIAEIIEVMVRPIVELSRDDNGGRSLIRLLLQVRARPSEDTIRVFVD
RVDPLVHRFVRVIQDAAPHLSRADIYWRYNFSIGAVMQVLTDADPTSLRLKRQSGGLCDTQDDEAIVRELVAFIAAGFAG
PGMPAVQSLTAAARSDAAAPRRARVRS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29242; Mature: 29111

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASDPAEQKSEVARPRLQKPRRAAAAPREERDGEPRLRILAAAEAVFATRGFDAATLRE
CCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
ITEAAGVNIAAVNYYFSSKDELVRQVLDRRMTPYTAARAAALEALVAAAGGKALKIAEII
HHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EVMVRPIVELSRDDNGGRSLIRLLLQVRARPSEDTIRVFVDRVDPLVHRFVRVIQDAAPH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSRADIYWRYNFSIGAVMQVLTDADPTSLRLKRQSGGLCDTQDDEAIVRELVAFIAAGFA
CCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
GPGMPAVQSLTAAARSDAAAPRRARVRS
CCCCHHHHHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure 
SASDPAEQKSEVARPRLQKPRRAAAAPREERDGEPRLRILAAAEAVFATRGFDAATLRE
CCCCCHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
ITEAAGVNIAAVNYYFSSKDELVRQVLDRRMTPYTAARAAALEALVAAAGGKALKIAEII
HHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EVMVRPIVELSRDDNGGRSLIRLLLQVRARPSEDTIRVFVDRVDPLVHRFVRVIQDAAPH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSRADIYWRYNFSIGAVMQVLTDADPTSLRLKRQSGGLCDTQDDEAIVRELVAFIAAGFA
CCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
GPGMPAVQSLTAAARSDAAAPRRARVRS
CCCCHHHHHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA