| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mopB [C]
Identifier: 158424272
GI number: 158424272
Start: 2999263
End: 3001518
Strand: Reverse
Name: mopB [C]
Synonym: AZC_2648
Alternate gene names: 158424272
Gene position: 3001518-2999263 (Counterclockwise)
Preceding gene: 158424281
Following gene: 158424270
Centisome position: 55.9
GC content: 68.75
Gene sequence:
>2256_bases ATGGTCGTCCAGCGCAAGCCCCATCTCGCCCATTGGGGCGCCTTCACCGCGCTGGTGGAGGACGGGCAGCTGGTGGGGTG CGAGCCCTTCGCCGCGGACCCTGCGCCCTCGCCTTTGCTGGGCAGTATCGTGCCCTCTGTCTATTCGGACCGGCGCATCC AGAAGCCCATGGTGCGGGAGAGCTTCCTGAAGCACGGCGCCGCGGCGGGAGGGGAGGGCCGTGGGCGCGAGCCCATGGTG GAGGTCTCCTGGGAGACCGCACTCGATCTCGCCGCCCGCGAGATAAGCCGGGTGGAGGTGGAGCATGGGCGCGGCGCGCT GTTCGCCGGCTCCTATGGCTGGTCCTCCGCCGGACGGCTGCACCATGCGCGCTCGTTGGTGCGGCGCTTCTATTTTTCCG GCGGCGGGGCCATCGATCAGGTGGGCAATTACAGCTGGGGCACGGCGCAATTCCTTTTGCCCCATATCATCGGCACCTAC CAGCCGCTGACCGGCCGTGCCACCTCCTGGCCGAGCATCCTCAAGCACTGCCGGCTCTTTCTCGCCTTCGGCGGGCTGGC GCTGAAGAACGGGCAGATGGCCTCGGGCGGCGCGGCCGAGCATACGCAGGAGCACTGGCTGCGCGAACTCGCGAAGGCCG GCATCCCGGTCATCAATGTTTCGCCCACGCGCGGCGACTGCCCGGACTTCCTGAACGCGGAATGGGTGCCCATCCGTCCC ACCACGGATGCGGCCTTTCTGCTGGCCCTACTATCGGAAGTCCTCCGCATCCAGGGTGCGGACCTCGCCTTCCTCGCCAC CCACACGGTGGGCTTCGAGCCGCTCGCCGCTTACGTGCGCGGGGAGAGCGACGGTGTGCCGAAGACGCCGGAATGGGCGC AGGACATCTGCGGCGTGCCAGCGGAGCGCATCCGGCAGATCGCGGCGCGCCTCGTGGGCGTCCGCAGCTACATCACCTGC TCTTTCGCCGTGCAGCGGGCGGAAAATGGCGAGCAGCCCTATTGGCTCGCTATCGCGCTCGCCAGCGTGCTCGGGCAGGT GGGCCTGCCCGGAGGCGGCTTCGGCTTTGGCCATGGCTCCATGAATGGCGTCGGCAACCCGAGGCCCGCGACGCCCGGCC CGGAGATGGCGGTTGGCGCCAATCCTCTGAAGCGGGCCATTCCCGCGGCCCGCATCACCGAAATGCTGGAGGCCCCCGGC ACGTCCTATCCCTTCAACGGACGCACCGAGACCTATCCGGATGTCCGGCTCATTCATTGGGCGGGCGGCAATCCCTTCCA CCACCATCAGGATCTCAACCGCTTCTCCCGCGCGTGGCAGAAGCCCGAGACCATCATCGTCAATGAAATCTGGTGGACGC CCACCGCCCGGCGCGCCGACATCGTGCTGCCGGTGACGACCACGCTGGAGCGCAACGACATCGGCGGTTCCTCCCGCGAC CGCTATGTGATCGCCATGCATCAGGCGATCGCACCGCTTCATGCGGCCCGCTCGGATTTCGACATCTTCGCCGATCTTGC CGAGCGGCTGGGGCACGGCGTGGCCTTCACGGGCGGCCTCGACGAGCAGGGCTGGATCGAGCGCATCTATGCCGACTGCG CGGCGGCCAATGCGAAAGCGGGCATCACCTTTCCCGATTTCGAGACCTTCTGGCAGGACGGCAGCTTCGAACTGCCCCGG CCGGCGCAGGATTTCGTGCTGTTCGCCGATTTCCGCGCCGATCCGCAGGCCCATCCGCTCGCGACGCCCTCGGGCCGGAT CGAGCTTTACAGCTCCGCCATCGCCTCTTTCGCGCTCTCCGACTGTCCGCCCCATCCGGTCTGGCGGGCGCCGGGCGAGT GGCTGGGGAGCGCGGGCGCCAAGCGCCATCCCTTGCATCTCGTAACGGTGCAGCCCTCGGACAGGCTGCACAGCCAGCTC GATTTCGCGCCCTTGCCTCAGGGCAACAAGGTGGATGGGCGCGAAGCGCTCCTCATGCATCCGGACGACGCCGCTGCGCG CGGCTGCGTGGCCGGGCGGACGGTGCGCGTGTTCAACGACCGGGGTGCGCTGCTGGCGGGTCTGGTGCTGGACGAAGGCG TGCATCGCGGCGTCGTGGTGATGGCGACGGGCGCCTGGTTCGACCCCGATCCCTCAGCCCCCGACGCGCCGGAGCGGGCC GGCACGGTCAATGTGCTGACGCGCGATGTGGGCACATCCAGCCTCACCCAAGGGCCGAACGCCATGAGCTGCCTCGTGGA GGTGGCGGCGGTCTAG
Upstream 100 bases:
>100_bases TTCAAATAATTGTTTGAAATCTGACCCGCATCCTGCACCCTGTCAATAGCGTGTCGCCGCCCTGTCATGGGCCGGCGTCG GATTTCGGAAGAGGCGTCAC
Downstream 100 bases:
>100_bases CGCGCCGGGCGGCCGTCAGTTCCGGAGAAATATTCCGGGTGTGACTGGCGCAACTGCTCGACGAAATCCAGCGAGCGGGA GAGGTGGTCCCGAAGCGCCT
Product: MopB superfamily protein
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MVVQRKPHLAHWGAFTALVEDGQLVGCEPFAADPAPSPLLGSIVPSVYSDRRIQKPMVRESFLKHGAAAGGEGRGREPMV EVSWETALDLAAREISRVEVEHGRGALFAGSYGWSSAGRLHHARSLVRRFYFSGGGAIDQVGNYSWGTAQFLLPHIIGTY QPLTGRATSWPSILKHCRLFLAFGGLALKNGQMASGGAAEHTQEHWLRELAKAGIPVINVSPTRGDCPDFLNAEWVPIRP TTDAAFLLALLSEVLRIQGADLAFLATHTVGFEPLAAYVRGESDGVPKTPEWAQDICGVPAERIRQIAARLVGVRSYITC SFAVQRAENGEQPYWLAIALASVLGQVGLPGGGFGFGHGSMNGVGNPRPATPGPEMAVGANPLKRAIPAARITEMLEAPG TSYPFNGRTETYPDVRLIHWAGGNPFHHHQDLNRFSRAWQKPETIIVNEIWWTPTARRADIVLPVTTTLERNDIGGSSRD RYVIAMHQAIAPLHAARSDFDIFADLAERLGHGVAFTGGLDEQGWIERIYADCAAANAKAGITFPDFETFWQDGSFELPR PAQDFVLFADFRADPQAHPLATPSGRIELYSSAIASFALSDCPPHPVWRAPGEWLGSAGAKRHPLHLVTVQPSDRLHSQL DFAPLPQGNKVDGREALLMHPDDAAARGCVAGRTVRVFNDRGALLAGLVLDEGVHRGVVVMATGAWFDPDPSAPDAPERA GTVNVLTRDVGTSSLTQGPNAMSCLVEVAAV
Sequences:
>Translated_751_residues MVVQRKPHLAHWGAFTALVEDGQLVGCEPFAADPAPSPLLGSIVPSVYSDRRIQKPMVRESFLKHGAAAGGEGRGREPMV EVSWETALDLAAREISRVEVEHGRGALFAGSYGWSSAGRLHHARSLVRRFYFSGGGAIDQVGNYSWGTAQFLLPHIIGTY QPLTGRATSWPSILKHCRLFLAFGGLALKNGQMASGGAAEHTQEHWLRELAKAGIPVINVSPTRGDCPDFLNAEWVPIRP TTDAAFLLALLSEVLRIQGADLAFLATHTVGFEPLAAYVRGESDGVPKTPEWAQDICGVPAERIRQIAARLVGVRSYITC SFAVQRAENGEQPYWLAIALASVLGQVGLPGGGFGFGHGSMNGVGNPRPATPGPEMAVGANPLKRAIPAARITEMLEAPG TSYPFNGRTETYPDVRLIHWAGGNPFHHHQDLNRFSRAWQKPETIIVNEIWWTPTARRADIVLPVTTTLERNDIGGSSRD RYVIAMHQAIAPLHAARSDFDIFADLAERLGHGVAFTGGLDEQGWIERIYADCAAANAKAGITFPDFETFWQDGSFELPR PAQDFVLFADFRADPQAHPLATPSGRIELYSSAIASFALSDCPPHPVWRAPGEWLGSAGAKRHPLHLVTVQPSDRLHSQL DFAPLPQGNKVDGREALLMHPDDAAARGCVAGRTVRVFNDRGALLAGLVLDEGVHRGVVVMATGAWFDPDPSAPDAPERA GTVNVLTRDVGTSSLTQGPNAMSCLVEVAAV >Mature_751_residues MVVQRKPHLAHWGAFTALVEDGQLVGCEPFAADPAPSPLLGSIVPSVYSDRRIQKPMVRESFLKHGAAAGGEGRGREPMV EVSWETALDLAAREISRVEVEHGRGALFAGSYGWSSAGRLHHARSLVRRFYFSGGGAIDQVGNYSWGTAQFLLPHIIGTY QPLTGRATSWPSILKHCRLFLAFGGLALKNGQMASGGAAEHTQEHWLRELAKAGIPVINVSPTRGDCPDFLNAEWVPIRP TTDAAFLLALLSEVLRIQGADLAFLATHTVGFEPLAAYVRGESDGVPKTPEWAQDICGVPAERIRQIAARLVGVRSYITC SFAVQRAENGEQPYWLAIALASVLGQVGLPGGGFGFGHGSMNGVGNPRPATPGPEMAVGANPLKRAIPAARITEMLEAPG TSYPFNGRTETYPDVRLIHWAGGNPFHHHQDLNRFSRAWQKPETIIVNEIWWTPTARRADIVLPVTTTLERNDIGGSSRD RYVIAMHQAIAPLHAARSDFDIFADLAERLGHGVAFTGGLDEQGWIERIYADCAAANAKAGITFPDFETFWQDGSFELPR PAQDFVLFADFRADPQAHPLATPSGRIELYSSAIASFALSDCPPHPVWRAPGEWLGSAGAKRHPLHLVTVQPSDRLHSQL DFAPLPQGNKVDGREALLMHPDDAAARGCVAGRTVRVFNDRGALLAGLVLDEGVHRGVVVMATGAWFDPDPSAPDAPERA GTVNVLTRDVGTSSLTQGPNAMSCLVEVAAV
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=757, Percent_Identity=39.7622192866579, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI145693196, Length=744, Percent_Identity=39.9193548387097, Blast_Score=516, Evalue=1e-147, Organism=Escherichia coli, GI1787231, Length=764, Percent_Identity=38.2198952879581, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI87081797, Length=741, Percent_Identity=29.8245614035088, Blast_Score=258, Evalue=8e-70, Organism=Escherichia coli, GI1787870, Length=716, Percent_Identity=28.7709497206704, Blast_Score=224, Evalue=2e-59, Organism=Escherichia coli, GI171474008, Length=741, Percent_Identity=28.7449392712551, Blast_Score=219, Evalue=7e-58, Organism=Escherichia coli, GI3868721, Length=538, Percent_Identity=22.4907063197026, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 80962; Mature: 80962
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00047 HISTONE_H4 ; PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVQRKPHLAHWGAFTALVEDGQLVGCEPFAADPAPSPLLGSIVPSVYSDRRIQKPMVRE CCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH SFLKHGAAAGGEGRGREPMVEVSWETALDLAAREISRVEVEHGRGALFAGSYGWSSAGRL HHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGAIDQVGNYSWGTAQFLLPHIIGTYQPLTGRATSWPSILKHCRLF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LAFGGLALKNGQMASGGAAEHTQEHWLRELAKAGIPVINVSPTRGDCPDFLNAEWVPIRP HHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEECCC TTDAAFLLALLSEVLRIQGADLAFLATHTVGFEPLAAYVRGESDGVPKTPEWAQDICGVP CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCC AERIRQIAARLVGVRSYITCSFAVQRAENGEQPYWLAIALASVLGQVGLPGGGFGFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRPATPGPEMAVGANPLKRAIPAARITEMLEAPGTSYPFNGRTETYPDVRLIHW CCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE AGGNPFHHHQDLNRFSRAWQKPETIIVNEIWWTPTARRADIVLPVTTTLERNDIGGSSRD CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECEEECCCCCCCCCC RYVIAMHQAIAPLHAARSDFDIFADLAERLGHGVAFTGGLDEQGWIERIYADCAAANAKA CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCC GITFPDFETFWQDGSFELPRPAQDFVLFADFRADPQAHPLATPSGRIELYSSAIASFALS CCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DCPPHPVWRAPGEWLGSAGAKRHPLHLVTVQPSDRLHSQLDFAPLPQGNKVDGREALLMH CCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PDDAAARGCVAGRTVRVFNDRGALLAGLVLDEGVHRGVVVMATGAWFDPDPSAPDAPERA CCHHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC GTVNVLTRDVGTSSLTQGPNAMSCLVEVAAV CEEEEEEECCCCHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MVVQRKPHLAHWGAFTALVEDGQLVGCEPFAADPAPSPLLGSIVPSVYSDRRIQKPMVRE CCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH SFLKHGAAAGGEGRGREPMVEVSWETALDLAAREISRVEVEHGRGALFAGSYGWSSAGRL HHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGAIDQVGNYSWGTAQFLLPHIIGTYQPLTGRATSWPSILKHCRLF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LAFGGLALKNGQMASGGAAEHTQEHWLRELAKAGIPVINVSPTRGDCPDFLNAEWVPIRP HHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEECCC TTDAAFLLALLSEVLRIQGADLAFLATHTVGFEPLAAYVRGESDGVPKTPEWAQDICGVP CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCC AERIRQIAARLVGVRSYITCSFAVQRAENGEQPYWLAIALASVLGQVGLPGGGFGFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRPATPGPEMAVGANPLKRAIPAARITEMLEAPGTSYPFNGRTETYPDVRLIHW CCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE AGGNPFHHHQDLNRFSRAWQKPETIIVNEIWWTPTARRADIVLPVTTTLERNDIGGSSRD CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECEEECCCCCCCCCC RYVIAMHQAIAPLHAARSDFDIFADLAERLGHGVAFTGGLDEQGWIERIYADCAAANAKA CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCC GITFPDFETFWQDGSFELPRPAQDFVLFADFRADPQAHPLATPSGRIELYSSAIASFALS CCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DCPPHPVWRAPGEWLGSAGAKRHPLHLVTVQPSDRLHSQLDFAPLPQGNKVDGREALLMH CCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PDDAAARGCVAGRTVRVFNDRGALLAGLVLDEGVHRGVVVMATGAWFDPDPSAPDAPERA CCHHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC GTVNVLTRDVGTSSLTQGPNAMSCLVEVAAV CEEEEEEECCCCHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]