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The map label for this gene is ydiK [C]

Identifier: 158424265

GI number: 158424265

Start: 2991795

End: 2992961

Strand: Direct

Name: ydiK [C]

Synonym: AZC_2641

Alternate gene names: 158424265

Gene position: 2991795-2992961 (Clockwise)

Preceding gene: 158424259

Following gene: 158424271

Centisome position: 55.72

GC content: 66.07

Gene sequence:

>1167_bases
GTGACGGCGGCCCTCCATCCGTCTACATGCAGGGATGGCACCGCGTGCGTTTGGTGTGCGGCTGCAGACACCTGCACCGG
CGCAGGACCAAAAGAGAGGGCCCCGTCCCAGATGTCGTCACCGAACGTCCAGCAGGGGAGCTTCCTGGCCCTCATCGTCC
TCGTCTCGGTGGCCTTCGCCTGGCTGCTCCTGCCCTTCTATGGCGCGCTGCTCTGGGCGGTGATCCTCGCCATCCTCTTC
AATCCCCTGAACCGCTGGCTGACCCGCCTGCTCGGCGGGCGCGCGAATCTCGCAGCGGCGCTGAGCGTGCTGGCCTGTAT
CTGCATCGTGGTGATACCGGGCTCGATGATCCTCGCCTCCCTCGCCCGCGAGGCGAGCGAACTGTACCAGCAGGTCTCCA
GCCGCCAGTTCAATCCGACCGAGATCACCGCCCGCGCGCATGATCTGCTGCCGGACTTCGTGAAGGATCTCCTCCCGCCC
TTCACCGGCGACACCTTCAAGGAGATCGAGAGCCGCCTCGCTTCCTTCCTCGGGCAGGCGTCGCAGGTGATCGCCTCCAG
CGCCGTGAGCGTCGGGCAAGGCACGGCGCAGCTCTTCGTCAGCCTCGGCGTCATGGTCTATGTGCTGTTCTTCCTGTTCC
GGGACGGCGCCTCTCTGGCCCTAGCGATCCGCCGCACCAGCCCGCTGAGCCCCCACCACACGGAGAGCCTGTTCGCCAAA
TTCTCCGACGTGCTGAAGGCGACGGTGAAGGGCAACGTCATCATCGCTCTGGTGCAGGGCCTGATCGGCGGCCTTGCCTT
CTGGGGCCTCGGCATTGGCGCGCCTCTGCTCTGGGGCGTGTCCATGGCCGTGCTCTCGCTGGTGCCAGCGGTGGGGGCGG
CGCTGGTATGGGGCCCCACGGCGGCCTATCTCATGCTGTCCGGGCAGTATCTGAAGGGCGCGATCCTGCTGGGGATCGGC
ATCTTCGTGATCAGCATGATCGACAACCTGTTGCGCCCGCCGCTCGTCGGCAAAGGCACGCGCCTGCCGGACTACATGGT
GCTGGTCTCGACGCTGGGTGGCATTTCGCTGTTTGGCGTCAACGGTTTCGTCATTGGGCCGCTGATCGCGGCGATGTTCG
TCGCCATCTGGTCCCTGTTCAAGGATGACCGTGCTGCCGGCTGCTGA

Upstream 100 bases:

>100_bases
GAGGTCGCGGCAACACCGCCACGCGTGGACGGCTTCGCCCTCCTTCGCCCCGAACGAGACGACACGCAGCGGCCCGCGGC
GTTCCTAAGGGCCGCGGCAC

Downstream 100 bases:

>100_bases
GCGTGTTCCGGCCCGGAGGCATCTCCGGACCGGAACTGGCTTCATCGCGGCTTGAGCCGCAAGACCCCTCGGATCTGGCT
CAGCGCCCCTTTTCCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTAALHPSTCRDGTACVWCAAADTCTGAGPKERAPSQMSSPNVQQGSFLALIVLVSVAFAWLLLPFYGALLWAVILAILF
NPLNRWLTRLLGGRANLAAALSVLACICIVVIPGSMILASLAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPP
FTGDTFKEIESRLASFLGQASQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAK
FSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAILLGIG
IFVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVAIWSLFKDDRAAGC

Sequences:

>Translated_388_residues
MTAALHPSTCRDGTACVWCAAADTCTGAGPKERAPSQMSSPNVQQGSFLALIVLVSVAFAWLLLPFYGALLWAVILAILF
NPLNRWLTRLLGGRANLAAALSVLACICIVVIPGSMILASLAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPP
FTGDTFKEIESRLASFLGQASQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAK
FSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAILLGIG
IFVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVAIWSLFKDDRAAGC
>Mature_387_residues
TAALHPSTCRDGTACVWCAAADTCTGAGPKERAPSQMSSPNVQQGSFLALIVLVSVAFAWLLLPFYGALLWAVILAILFN
PLNRWLTRLLGGRANLAAALSVLACICIVVIPGSMILASLAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPPF
TGDTFKEIESRLASFLGQASQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAKF
SDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAILLGIGI
FVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVAIWSLFKDDRAAGC

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=346, Percent_Identity=24.8554913294798, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40921; Mature: 40790

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAALHPSTCRDGTACVWCAAADTCTGAGPKERAPSQMSSPNVQQGSFLALIVLVSVAFA
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WLLLPFYGALLWAVILAILFNPLNRWLTRLLGGRANLAAALSVLACICIVVIPGSMILAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPPFTGDTFKEIESRLASFLGQA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH
FSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AAYLMLSGQYLKGAILLGIGIFVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECC
NGFVIGPLIAAMFVAIWSLFKDDRAAGC
CHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAALHPSTCRDGTACVWCAAADTCTGAGPKERAPSQMSSPNVQQGSFLALIVLVSVAFA
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WLLLPFYGALLWAVILAILFNPLNRWLTRLLGGRANLAAALSVLACICIVVIPGSMILAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPPFTGDTFKEIESRLASFLGQA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH
FSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AAYLMLSGQYLKGAILLGIGIFVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECC
NGFVIGPLIAAMFVAIWSLFKDDRAAGC
CHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]