BacMap

Definition	Azorhizobium caulinodans ORS 571, complete genome.
Accession	NC_009937
Length	5,369,772

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The map label for this gene is gudP [H]

Identifier: 158424264

GI number: 158424264

Start: 2990055

End: 2991383

Strand: Reverse

Name: gudP [H]

Synonym: AZC_2640

Alternate gene names: 158424264

Gene position: 2991383-2990055 (Counterclockwise)

Preceding gene: 158424266

Following gene: 158424263

Centisome position: 55.71

GC content: 64.11

Gene sequence:

>1329_bases
GTGGCCATCTCGACCGCTTATGCCGCGCAGGCCCGCAGCCGCGCGCGCTACTGGATCGTCTTCGTTATTTTCGCGGTCAC
CGTGCTCAATTATGCCGACCGCGCCATCATTTCCATCGCCGGGGCGCCCCTCGCCAAGGAATATGCCATCGATCCGGTGG
CCATGGGCTACATCCTCTCCGCCTTCAGCTGGTCCTATGTGGCGGCGCAGATCCCCGGCGGCTGGCTGCTGGATCGCTAC
GGCACCAAATGGGTCTATGCGGCGGGTATCTTCTTCTGGTCTCTCTTCACCTTCATGCAGGGCTGGGTCGGCTTCTTCGG
CGCCGGCGGGGCCATCATTGCGCTCTTTGCCTTCCGCTTCATGGTGGGCATTGCGGAGGCTCCGTCCTTCCCCGGCAACG
CCCGGATCGTCGCCGCCTGGTTCCCCACAGCCGAGCGCGGCAAGGCCTCCGCCATCTTCAATTCGGCGCAGTATTTCGCG
CCCGTGCTGTTTGCCCCGCTCACCGCCTGGGTGACGCAGGAATTCGGCTGGCGCTATGCCTTCATGTTCATGGGCGTGAT
TGGCATCGCCTTCGTCGCCATCTGGGCGAAGGTCATTCACGGCCCGAAGGATCATCCCGGCATCAACGAGGCCGAGCTGA
ACCATATCCGCGAGGGCGGCGCCCTGATGGAAATGGGCGCGTCGCCCAAGGACAAGGGCGCGCCGGCCTGGGGCTATATC
AAGCAGCTCCTCTCCAACCGGATGCTGCTCGGGATCTATCTCGCGCAGTACTGCATCAACGTCATCACCTACTTCTTCCT
CACCTGGTTCCCCATCTATCTGGTGAAGGAGCGGGGGATGACCATCCTCAAGGCGGGCATGGTGGCCTCCCTCCCGGCGC
TCTGCGGCTTCATCGGCGGCGTGCTGGGCGGCGTGATCTCGGACGCCATCCTGCGGCGCACCGGATCGCTGACGCTGGCC
CGCAAGATTCCGATCATCGGCGGCATGCTGCTGTCCATGACCATCATCGGCTGCAATTACGTGCAGACGGAAGCCTTCGT
GGTGGGCCTGATGGCGCTGGCCTTCTTCGGCAAGGGCATCGGCGCGCTGGGCTGGGCGGTGGTCTCGGACACCTCGCCGA
AGCAGATCGGCGGCCTCTCCGGGGGCCTGTTCAACACCTTCGGCAACATGGCCGGCATCACCACGCCCATCGTCATCGGC
TACATCGTGCAGGGCACCGGCTCCTTCAACGGCGCGCTGCTGTTCGTGGGCATCAATGCCTTCATCGCCATGGCGGCCTA
TCTGGTCATGGTGGGCGAGATCAAGCGCGTCGAACTGAAAGACGCCTGA

Upstream 100 bases:

>100_bases
CGCCTTCACGGGGCACGTCCGCGCGCGCTCGCGTCCGCGCCAACAACAATGCGCCCCGGTCCACGGGGCGGGAGCAAACG
CCAGCCCAGGGAGACAGGCC

Downstream 100 bases:

>100_bases
TCGCAAGGCTGGCGGTGCTGCTTGCACACCGGCGGTCCTGCGACCAAGACTGGCCGGTCAGGGCCTTGAGATGCCGCGCC
GCTGGGCCCGCCAGCCGCGC

Product: MFS transporter phthalate permease

Products: NA

Alternate protein names: D-glucarate permease [H]

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MAISTAYAAQARSRARYWIVFVIFAVTVLNYADRAIISIAGAPLAKEYAIDPVAMGYILSAFSWSYVAAQIPGGWLLDRY
GTKWVYAAGIFFWSLFTFMQGWVGFFGAGGAIIALFAFRFMVGIAEAPSFPGNARIVAAWFPTAERGKASAIFNSAQYFA
PVLFAPLTAWVTQEFGWRYAFMFMGVIGIAFVAIWAKVIHGPKDHPGINEAELNHIREGGALMEMGASPKDKGAPAWGYI
KQLLSNRMLLGIYLAQYCINVITYFFLTWFPIYLVKERGMTILKAGMVASLPALCGFIGGVLGGVISDAILRRTGSLTLA
RKIPIIGGMLLSMTIIGCNYVQTEAFVVGLMALAFFGKGIGALGWAVVSDTSPKQIGGLSGGLFNTFGNMAGITTPIVIG
YIVQGTGSFNGALLFVGINAFIAMAAYLVMVGEIKRVELKDA

Sequences:

>Translated_442_residues
MAISTAYAAQARSRARYWIVFVIFAVTVLNYADRAIISIAGAPLAKEYAIDPVAMGYILSAFSWSYVAAQIPGGWLLDRY
GTKWVYAAGIFFWSLFTFMQGWVGFFGAGGAIIALFAFRFMVGIAEAPSFPGNARIVAAWFPTAERGKASAIFNSAQYFA
PVLFAPLTAWVTQEFGWRYAFMFMGVIGIAFVAIWAKVIHGPKDHPGINEAELNHIREGGALMEMGASPKDKGAPAWGYI
KQLLSNRMLLGIYLAQYCINVITYFFLTWFPIYLVKERGMTILKAGMVASLPALCGFIGGVLGGVISDAILRRTGSLTLA
RKIPIIGGMLLSMTIIGCNYVQTEAFVVGLMALAFFGKGIGALGWAVVSDTSPKQIGGLSGGLFNTFGNMAGITTPIVIG
YIVQGTGSFNGALLFVGINAFIAMAAYLVMVGEIKRVELKDA
>Mature_441_residues
AISTAYAAQARSRARYWIVFVIFAVTVLNYADRAIISIAGAPLAKEYAIDPVAMGYILSAFSWSYVAAQIPGGWLLDRYG
TKWVYAAGIFFWSLFTFMQGWVGFFGAGGAIIALFAFRFMVGIAEAPSFPGNARIVAAWFPTAERGKASAIFNSAQYFAP
VLFAPLTAWVTQEFGWRYAFMFMGVIGIAFVAIWAKVIHGPKDHPGINEAELNHIREGGALMEMGASPKDKGAPAWGYIK
QLLSNRMLLGIYLAQYCINVITYFFLTWFPIYLVKERGMTILKAGMVASLPALCGFIGGVLGGVISDAILRRTGSLTLAR
KIPIIGGMLLSMTIIGCNYVQTEAFVVGLMALAFFGKGIGALGWAVVSDTSPKQIGGLSGGLFNTFGNMAGITTPIVIGY
IVQGTGSFNGALLFVGINAFIAMAAYLVMVGEIKRVELKDA

Specific function: Uptake of D-glucarate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI9945322, Length=362, Percent_Identity=25.9668508287293, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI9966811, Length=388, Percent_Identity=25.7731958762887, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI6912666, Length=418, Percent_Identity=24.8803827751196, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4885441, Length=388, Percent_Identity=25.7731958762887, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI21322234, Length=389, Percent_Identity=23.3933161953728, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI5031955, Length=271, Percent_Identity=26.9372693726937, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI148743791, Length=375, Percent_Identity=23.4666666666667, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI256219598, Length=401, Percent_Identity=22.1945137157107, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4503847, Length=401, Percent_Identity=22.1945137157107, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI256219483, Length=401, Percent_Identity=22.1945137157107, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI256219543, Length=316, Percent_Identity=23.1012658227848, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI223718438, Length=197, Percent_Identity=23.8578680203046, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI154350196, Length=417, Percent_Identity=21.3429256594724, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI154800443, Length=340, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1789152, Length=438, Percent_Identity=63.013698630137, Blast_Score=581, Evalue=1e-167,
Organism=Escherichia coli, GI1789515, Length=444, Percent_Identity=59.2342342342342, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI87082320, Length=426, Percent_Identity=41.7840375586854, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI2367379, Length=432, Percent_Identity=28.7037037037037, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI2367193, Length=317, Percent_Identity=26.813880126183, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1788573, Length=432, Percent_Identity=21.9907407407407, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533554, Length=387, Percent_Identity=28.6821705426357, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI115533556, Length=387, Percent_Identity=28.6821705426357, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17535049, Length=415, Percent_Identity=24.0963855421687, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17552542, Length=370, Percent_Identity=25.9459459459459, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560030, Length=366, Percent_Identity=23.224043715847, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25145964, Length=267, Percent_Identity=23.9700374531835, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32565914, Length=399, Percent_Identity=22.8070175438596, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997452, Length=362, Percent_Identity=22.9281767955801, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569727, Length=409, Percent_Identity=22.9828850855746, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71991448, Length=396, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141318, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI86561091, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71991453, Length=396, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554148, Length=363, Percent_Identity=23.1404958677686, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141341, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141316, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565916, Length=254, Percent_Identity=21.6535433070866, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17564202, Length=260, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193205400, Length=280, Percent_Identity=20.7142857142857, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24583789, Length=395, Percent_Identity=25.3164556962025, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24641682, Length=426, Percent_Identity=25.3521126760563, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24584153, Length=382, Percent_Identity=25.130890052356, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24639764, Length=442, Percent_Identity=23.9819004524887, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45550460, Length=400, Percent_Identity=26.5, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19922400, Length=372, Percent_Identity=26.6129032258064, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24654215, Length=372, Percent_Identity=26.6129032258064, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24655255, Length=382, Percent_Identity=26.7015706806283, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI28573708, Length=366, Percent_Identity=25.9562841530055, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI28573707, Length=366, Percent_Identity=25.9562841530055, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24580790, Length=392, Percent_Identity=23.469387755102, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24655271, Length=410, Percent_Identity=23.6585365853659, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI20130135, Length=410, Percent_Identity=23.6585365853659, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24648416, Length=406, Percent_Identity=22.9064039408867, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21356189, Length=406, Percent_Identity=22.9064039408867, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI62484226, Length=355, Percent_Identity=25.0704225352113, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI20130167, Length=302, Percent_Identity=24.8344370860927, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24658658, Length=415, Percent_Identity=24.3373493975904, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573299, Length=408, Percent_Identity=25.2450980392157, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24653727, Length=391, Percent_Identity=24.8081841432225, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17864456, Length=376, Percent_Identity=25.2659574468085, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19920686, Length=406, Percent_Identity=22.6600985221675, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654039, Length=376, Percent_Identity=25.2659574468085, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221474708, Length=161, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI20129235, Length=379, Percent_Identity=25.065963060686, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45550495, Length=375, Percent_Identity=22.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24658666, Length=370, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47597; Mature: 47466

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISTAYAAQARSRARYWIVFVIFAVTVLNYADRAIISIAGAPLAKEYAIDPVAMGYILS
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
AFSWSYVAAQIPGGWLLDRYGTKWVYAAGIFFWSLFTFMQGWVGFFGAGGAIIALFAFRF
HHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MVGIAEAPSFPGNARIVAAWFPTAERGKASAIFNSAQYFAPVLFAPLTAWVTQEFGWRYA
HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
FMFMGVIGIAFVAIWAKVIHGPKDHPGINEAELNHIREGGALMEMGASPKDKGAPAWGYI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHH
KQLLSNRMLLGIYLAQYCINVITYFFLTWFPIYLVKERGMTILKAGMVASLPALCGFIGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLGGVISDAILRRTGSLTLARKIPIIGGMLLSMTIIGCNYVQTEAFVVGLMALAFFGKGI
HHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
GALGWAVVSDTSPKQIGGLSGGLFNTFGNMAGITTPIVIGYIVQGTGSFNGALLFVGINA
HHHHHHEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEEEEHHHH
FIAMAAYLVMVGEIKRVELKDA
HHHHHHHHHHHHCHHEEEECCC
>Mature Secondary Structure 
AISTAYAAQARSRARYWIVFVIFAVTVLNYADRAIISIAGAPLAKEYAIDPVAMGYILS
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
AFSWSYVAAQIPGGWLLDRYGTKWVYAAGIFFWSLFTFMQGWVGFFGAGGAIIALFAFRF
HHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MVGIAEAPSFPGNARIVAAWFPTAERGKASAIFNSAQYFAPVLFAPLTAWVTQEFGWRYA
HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
FMFMGVIGIAFVAIWAKVIHGPKDHPGINEAELNHIREGGALMEMGASPKDKGAPAWGYI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHH
KQLLSNRMLLGIYLAQYCINVITYFFLTWFPIYLVKERGMTILKAGMVASLPALCGFIGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLGGVISDAILRRTGSLTLARKIPIIGGMLLSMTIIGCNYVQTEAFVVGLMALAFFGKGI
HHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
GALGWAVVSDTSPKQIGGLSGGLFNTFGNMAGITTPIVIGYIVQGTGSFNGALLFVGINA
HHHHHHEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEEEEHHHH
FIAMAAYLVMVGEIKRVELKDA
HHHHHHHHHHHHCHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9772162; 10762278 [H]