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The map label for this gene is glcD [H]

Identifier: 158424098

GI number: 158424098

Start: 2810214

End: 2811653

Strand: Direct

Name: glcD [H]

Synonym: AZC_2474

Alternate gene names: 158424098

Gene position: 2810214-2811653 (Clockwise)

Preceding gene: 158424097

Following gene: 158424099

Centisome position: 52.33

GC content: 68.33

Gene sequence:

>1440_bases
ATGGCCAGTCCGTCTTCCGATATCGTCTCCGCTTTGACCGCGCTCCTCGGCGCCGACAGCCTCCTCACGGAGGCGGCGGA
CGTCGCGGCGCATATCGAAGACTGGCGCGAGCGATATCGCGGCCCCGCGGCCTGCGTCGTGCTGCCAAGGAGCACGCAGG
AAGTGTCCGATGTGGTGCGCCTGTGCCACGCCCATGGCGTTCCGGTCCTGCCGCAGGGCGGCAACACCAGCCTGTGCGGC
GGCGCGGTGCCTGGCACGGACGGGCAGCCCCCGGTGATCGTCGCGCTCTCCCGCCTGCGCCGCATCCGGTCCGTCGATCC
CGCCAACAATGCCATGGTGGTGGACGGCGGCTGCGTGCTTGCGAACGTGCAGGAGGCGGCGCGAGAGGCTGGCCGGCTCT
ATCCCATCAGCCTCGGGGCGGAAGGCTCCTGCCAGATCGCCGGCACCATCGCCACCAATGCCGGCGGCACCGCCGTCCTG
CGCTACGGCAACACCCGCGAGAATATCCTCGGCCTTGAAGCGGTGCTGCCGGACGGCGCCATCTGGGACGGTCTGAAGGC
GCTCCGCAAGAACAACACGGGCTACGACCTCAAGCACCTGTTCATCGGCTCGGAAGGCACGCTCGGCATCATCACCGGCG
CCACCCTGAAGCTGCACCCGCTGCCGACCGCCTTCTGTGTGGCCTGGGTCGGCGTCAGCTCGCCGGATGCGGCGCTGTCC
CTGCTCGGACGGCTCCAGTCCGCCTGCGGTGCCCGCCTTTCCGCCTTCGAGCTCATCAATGACCTCCAGCTTGATCTCGT
GCTCGCAAATGTTCCGGGCCGCCGTAATCCCTTCTCGGCCAGCCATCCCTGGCACGTGCTGGTGGAACTGAGCGACAACA
GCCCCGAGGTGGAGCTGTCCGCCGTTCTCGGCCGGGTGCTCGAAGAGGCCATGGAAGCCGACCTCATCGAGGATGCCGTC
CTCGCCGCCAGCGAAGCCCAGCGCGCGGCCCTCTGGGAGATCCGCCACTCGGTGTCGGAAGCCAACAAGAAGGCCGGCGT
CGGCCTCACCACCGACTGCGCGGTGCCGGTCTCGGCCGTGCCGACCTTCATCGCGCAGGCGACGGAAGCCGTTCGCGCCA
TTGTTCCGGACCTGCCGGTGATCGTCGTCGCCCACATGGGCGACGGCAATGCCCACTTCATTCCCTTCTTCACCTATCCA
GAATGGGAGGCGGTGGCCGACAAGGAGGCCATGGCGCACCGGATGCGCCATGTGGTGAACGAGGTTTCCCACGCTCTCGG
CGGCACCTTCAGTGCCGAGCACGGCGTGGGGCGCACGCACATCGCGGAGATGGCGCACTTCAAGTCGCCCGTCGAACTCA
AGCTCATGCACGCGGTGAAGGCCGCCTTCGACCCCGACAACCTCTTCAACCCCGGCCGCCTGCTGCCTCCCGCAGCCTGA

Upstream 100 bases:

>100_bases
CAGCCCCAGATGAGGCTGCGCAGGCGCTTGTGCGCATGCCAAAACATATGTAGCGTATTCCAATCATAGTAATTGTAATG
CGATTACTCAAGGTCTAAGC

Downstream 100 bases:

>100_bases
GCCGGGAAACGGCCGATCCCACGTTCAAACAGTGTCTCAGGTCCTCATAACAAACTTCAGAGGTGAGCCCATGACTGACG
TTTCCGGTACCGGTCCCTCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MASPSSDIVSALTALLGADSLLTEAADVAAHIEDWRERYRGPAACVVLPRSTQEVSDVVRLCHAHGVPVLPQGGNTSLCG
GAVPGTDGQPPVIVALSRLRRIRSVDPANNAMVVDGGCVLANVQEAAREAGRLYPISLGAEGSCQIAGTIATNAGGTAVL
RYGNTRENILGLEAVLPDGAIWDGLKALRKNNTGYDLKHLFIGSEGTLGIITGATLKLHPLPTAFCVAWVGVSSPDAALS
LLGRLQSACGARLSAFELINDLQLDLVLANVPGRRNPFSASHPWHVLVELSDNSPEVELSAVLGRVLEEAMEADLIEDAV
LAASEAQRAALWEIRHSVSEANKKAGVGLTTDCAVPVSAVPTFIAQATEAVRAIVPDLPVIVVAHMGDGNAHFIPFFTYP
EWEAVADKEAMAHRMRHVVNEVSHALGGTFSAEHGVGRTHIAEMAHFKSPVELKLMHAVKAAFDPDNLFNPGRLLPPAA

Sequences:

>Translated_479_residues
MASPSSDIVSALTALLGADSLLTEAADVAAHIEDWRERYRGPAACVVLPRSTQEVSDVVRLCHAHGVPVLPQGGNTSLCG
GAVPGTDGQPPVIVALSRLRRIRSVDPANNAMVVDGGCVLANVQEAAREAGRLYPISLGAEGSCQIAGTIATNAGGTAVL
RYGNTRENILGLEAVLPDGAIWDGLKALRKNNTGYDLKHLFIGSEGTLGIITGATLKLHPLPTAFCVAWVGVSSPDAALS
LLGRLQSACGARLSAFELINDLQLDLVLANVPGRRNPFSASHPWHVLVELSDNSPEVELSAVLGRVLEEAMEADLIEDAV
LAASEAQRAALWEIRHSVSEANKKAGVGLTTDCAVPVSAVPTFIAQATEAVRAIVPDLPVIVVAHMGDGNAHFIPFFTYP
EWEAVADKEAMAHRMRHVVNEVSHALGGTFSAEHGVGRTHIAEMAHFKSPVELKLMHAVKAAFDPDNLFNPGRLLPPAA
>Mature_478_residues
ASPSSDIVSALTALLGADSLLTEAADVAAHIEDWRERYRGPAACVVLPRSTQEVSDVVRLCHAHGVPVLPQGGNTSLCGG
AVPGTDGQPPVIVALSRLRRIRSVDPANNAMVVDGGCVLANVQEAAREAGRLYPISLGAEGSCQIAGTIATNAGGTAVLR
YGNTRENILGLEAVLPDGAIWDGLKALRKNNTGYDLKHLFIGSEGTLGIITGATLKLHPLPTAFCVAWVGVSSPDAALSL
LGRLQSACGARLSAFELINDLQLDLVLANVPGRRNPFSASHPWHVLVELSDNSPEVELSAVLGRVLEEAMEADLIEDAVL
AASEAQRAALWEIRHSVSEANKKAGVGLTTDCAVPVSAVPTFIAQATEAVRAIVPDLPVIVVAHMGDGNAHFIPFFTYPE
WEAVADKEAMAHRMRHVVNEVSHALGGTFSAEHGVGRTHIAEMAHFKSPVELKLMHAVKAAFDPDNLFNPGRLLPPAA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=459, Percent_Identity=35.9477124183007, Blast_Score=259, Evalue=6e-69,
Organism=Homo sapiens, GI37595756, Length=476, Percent_Identity=31.9327731092437, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI37595754, Length=499, Percent_Identity=30.6613226452906, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI4501993, Length=454, Percent_Identity=22.2466960352423, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1789351, Length=486, Percent_Identity=31.4814814814815, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787977, Length=521, Percent_Identity=25.7197696737044, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI48994907, Length=511, Percent_Identity=21.5264187866928, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17534361, Length=473, Percent_Identity=31.0782241014799, Blast_Score=247, Evalue=9e-66,
Organism=Caenorhabditis elegans, GI71992373, Length=489, Percent_Identity=29.8568507157464, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI71992381, Length=483, Percent_Identity=29.6066252587992, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71992392, Length=372, Percent_Identity=31.7204301075269, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17556096, Length=178, Percent_Identity=25.8426966292135, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320023, Length=485, Percent_Identity=34.020618556701, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6320764, Length=482, Percent_Identity=30.2904564315353, Blast_Score=263, Evalue=3e-71,
Organism=Saccharomyces cerevisiae, GI6320027, Length=444, Percent_Identity=32.6576576576577, Blast_Score=180, Evalue=5e-46,
Organism=Drosophila melanogaster, GI18921117, Length=476, Percent_Identity=32.1428571428571, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24639277, Length=476, Percent_Identity=32.1428571428571, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24639275, Length=476, Percent_Identity=32.1428571428571, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24653753, Length=478, Percent_Identity=24.0585774058577, Blast_Score=95, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50410; Mature: 50279

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPSSDIVSALTALLGADSLLTEAADVAAHIEDWRERYRGPAACVVLPRSTQEVSDVVR
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
LCHAHGVPVLPQGGNTSLCGGAVPGTDGQPPVIVALSRLRRIRSVDPANNAMVVDGGCVL
HHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEEE
ANVQEAAREAGRLYPISLGAEGSCQIAGTIATNAGGTAVLRYGNTRENILGLEAVLPDGA
HHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHEEHHHCCCCCH
IWDGLKALRKNNTGYDLKHLFIGSEGTLGIITGATLKLHPLPTAFCVAWVGVSSPDAALS
HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEECCCCHHHHHHHHCCCCHHHHHH
LLGRLQSACGARLSAFELINDLQLDLVLANVPGRRNPFSASHPWHVLVELSDNSPEVELS
HHHHHHHHHCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
AVLGRVLEEAMEADLIEDAVLAASEAQRAALWEIRHSVSEANKKAGVGLTTDCAVPVSAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
PTFIAQATEAVRAIVPDLPVIVVAHMGDGNAHFIPFFTYPEWEAVADKEAMAHRMRHVVN
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
EVSHALGGTFSAEHGVGRTHIAEMAHFKSPVELKLMHAVKAAFDPDNLFNPGRLLPPAA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASPSSDIVSALTALLGADSLLTEAADVAAHIEDWRERYRGPAACVVLPRSTQEVSDVVR
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
LCHAHGVPVLPQGGNTSLCGGAVPGTDGQPPVIVALSRLRRIRSVDPANNAMVVDGGCVL
HHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEEE
ANVQEAAREAGRLYPISLGAEGSCQIAGTIATNAGGTAVLRYGNTRENILGLEAVLPDGA
HHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHEEHHHCCCCCH
IWDGLKALRKNNTGYDLKHLFIGSEGTLGIITGATLKLHPLPTAFCVAWVGVSSPDAALS
HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEECCCCHHHHHHHHCCCCHHHHHH
LLGRLQSACGARLSAFELINDLQLDLVLANVPGRRNPFSASHPWHVLVELSDNSPEVELS
HHHHHHHHHCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
AVLGRVLEEAMEADLIEDAVLAASEAQRAALWEIRHSVSEANKKAGVGLTTDCAVPVSAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
PTFIAQATEAVRAIVPDLPVIVVAHMGDGNAHFIPFFTYPEWEAVADKEAMAHRMRHVVN
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
EVSHALGGTFSAEHGVGRTHIAEMAHFKSPVELKLMHAVKAAFDPDNLFNPGRLLPPAA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]