| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is marR [C]
Identifier: 158424097
GI number: 158424097
Start: 2809534
End: 2810076
Strand: Direct
Name: marR [C]
Synonym: AZC_2473
Alternate gene names: 158424097
Gene position: 2809534-2810076 (Clockwise)
Preceding gene: 158424089
Following gene: 158424098
Centisome position: 52.32
GC content: 67.03
Gene sequence:
>543_bases ATGAGCGCCGTCGTGACGGAACGACGGGACCGTCACGGCCGGAGTGACAGCGTGTCCGACGATCGCCACCGCGAGACTTC GACCGGAACGGCCGACGCTCCGCACGCGGACGGCCCCTACGACTTCCGCGAACAGGTCGGCCACCTCCTGCGCAAGACCT ACCAGCGCCACCTGGCGATCTTCCAGCAGCACGCGGCCGACCCCAACCTCACCGCAGTCCAGTTCGTCACCCTCTGCGCC CTGCGCGACAACGGCCCGAGTTCCCAGAGCGAACTGGTCCGCCTGACGGCCGTCGACCAGGGCACCATCCGCGGCATCAT CGACCGCCTGCGCGCCCGCGAACTCATCTCTCTCACCACAGACCCGGAAGACCGGCGCAAGGTGATCGCAACGCTGACGG ACGGCGGCCGGACGGCAATCGCAGAGATGGTGCCCTGCGCCCATCGGATCACGGAACTGACGCTTCAAAATCTCAATGCG GCGGAACGCGTGGCCCTGCAGTTTCTTCTGCGCAAGATGCTCGGTCCGGACACACAGGGCTGA
Upstream 100 bases:
>100_bases CGTGCCAATTTAATTTGCACACGCACAAATTTCGAGACGCAGCGCGAAATCAACATTTCCCGATTGCGCGAGAAGAAGAG TGCACACTACGATCCCATAG
Downstream 100 bases:
>100_bases TAAGCCCGATCTCATCAGCCGCGGAAATCCACCGGCCCAGCCCCAGATGAGGCTGCGCAGGCGCTTGTGCGCATGCCAAA ACATATGTAGCGTATTCCAA
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Multiple Antibiotic Resistance Protein MarR; Transcriptional Regulatory Protein; Transcriptional Regulator MarR; MarR Family Transcription Regulator Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSAVVTERRDRHGRSDSVSDDRHRETSTGTADAPHADGPYDFREQVGHLLRKTYQRHLAIFQQHAADPNLTAVQFVTLCA LRDNGPSSQSELVRLTAVDQGTIRGIIDRLRARELISLTTDPEDRRKVIATLTDGGRTAIAEMVPCAHRITELTLQNLNA AERVALQFLLRKMLGPDTQG
Sequences:
>Translated_180_residues MSAVVTERRDRHGRSDSVSDDRHRETSTGTADAPHADGPYDFREQVGHLLRKTYQRHLAIFQQHAADPNLTAVQFVTLCA LRDNGPSSQSELVRLTAVDQGTIRGIIDRLRARELISLTTDPEDRRKVIATLTDGGRTAIAEMVPCAHRITELTLQNLNA AERVALQFLLRKMLGPDTQG >Mature_179_residues SAVVTERRDRHGRSDSVSDDRHRETSTGTADAPHADGPYDFREQVGHLLRKTYQRHLAIFQQHAADPNLTAVQFVTLCAL RDNGPSSQSELVRLTAVDQGTIRGIIDRLRARELISLTTDPEDRRKVIATLTDGGRTAIAEMVPCAHRITELTLQNLNAA ERVALQFLLRKMLGPDTQG
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081927, Length=135, Percent_Identity=31.1111111111111, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20019; Mature: 19888
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVTERRDRHGRSDSVSDDRHRETSTGTADAPHADGPYDFREQVGHLLRKTYQRHLAI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FQQHAADPNLTAVQFVTLCALRDNGPSSQSELVRLTAVDQGTIRGIIDRLRARELISLTT HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCC DPEDRRKVIATLTDGGRTAIAEMVPCAHRITELTLQNLNAAERVALQFLLRKMLGPDTQG CCHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAVVTERRDRHGRSDSVSDDRHRETSTGTADAPHADGPYDFREQVGHLLRKTYQRHLAI CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FQQHAADPNLTAVQFVTLCALRDNGPSSQSELVRLTAVDQGTIRGIIDRLRARELISLTT HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCC DPEDRRKVIATLTDGGRTAIAEMVPCAHRITELTLQNLNAAERVALQFLLRKMLGPDTQG CCHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA