| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pheC [H]
Identifier: 158424034
GI number: 158424034
Start: 2737120
End: 2737908
Strand: Direct
Name: pheC [H]
Synonym: AZC_2410
Alternate gene names: 158424034
Gene position: 2737120-2737908 (Clockwise)
Preceding gene: 158424033
Following gene: 158424035
Centisome position: 50.97
GC content: 62.48
Gene sequence:
>789_bases ATGATTCACCGCAGGCTGAAGGCGCTGGGCACCGGGCTGCTGCTGGCAGCATTCGCCCTCGGCACACCCGCACGGGCGCA GGAGAGTCACCTCGAGCAGGTGCAGAAGATTGGCGCGCTGAAGGTGTGCACCACGGGCGACTACCGCCCCTTCACCTATC TCGATCCGGCCACCGGCAAGTTCGAAGGCATCGACATCGATCTCGCGAACGACCTCGGCACCGCGCTCGGAGTCAAGGTG GAGTTCGTGAAGACCTCCTGGTCGAACCTCATGAAGGACTTCACCGGCGGCGCCTGCGACATCGCCATGGGCGGCATCAG CATCACGCTGCCGCGCCAGAAGGCGGCCTATTTCTCCATTCCCATCATGGTGGACGGCAAGACGCCCATCACCAAGTGCG AGAATGTCTCGAAATTCCAGACGCTAGCGGATATCGACAAGCCGGGCGTCACCGCCGTGGTCAATCCTGGCGGCACCAAC GAGAGCTTTGCCCGCGCCTCGCTGAAGAATGCCAAGATCGTTGTCTTCCCCGACAACACCACGATCTTCGAGGAAATCCT GGCCGGTCGCGCCGACCTCATGATGACCGACGCCATCGAGACCAGGTTGCAGGAAAAGCGCCATCCCGGCCTGTGCGCCG TGCATCCGGACAAGCCCTTCACCTTCAGCGAGAAGGCCTTCCTGCTTCCGCAGGGCGATGAGGTCTTCAAGGCCTTCGTG GACCAGTGGCTGCATCTGCGCCTCAACGACGGCACCTATGCGCGGATTTCCGCCACCTGGATTCGGTGA
Upstream 100 bases:
>100_bases TTTGGCTGCATCGCCGCTGGCGATAAGTCGGCGCGGTCCCTTCCCGTCCGCCCCGTGCCCGTGATGAGGTGGGGCACCGC AAAGACGGGAGGAGCACCAC
Downstream 100 bases:
>100_bases ACGAGGCCGGAGGGCGGGGCGGTTTGCGCCCTGCCCATCATGCCGCTGTTGCAGACTTGTCCTAGAGTTTCAACTCTGGC GACCTTTTGCCATATTGCGG
Product: lytic transglycosylase
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIHRRLKALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGKFEGIDIDLANDLGTALGVKV EFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSIPIMVDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTN ESFARASLKNAKIVVFPDNTTIFEEILAGRADLMMTDAIETRLQEKRHPGLCAVHPDKPFTFSEKAFLLPQGDEVFKAFV DQWLHLRLNDGTYARISATWIR
Sequences:
>Translated_262_residues MIHRRLKALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGKFEGIDIDLANDLGTALGVKV EFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSIPIMVDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTN ESFARASLKNAKIVVFPDNTTIFEEILAGRADLMMTDAIETRLQEKRHPGLCAVHPDKPFTFSEKAFLLPQGDEVFKAFV DQWLHLRLNDGTYARISATWIR >Mature_262_residues MIHRRLKALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGKFEGIDIDLANDLGTALGVKV EFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSIPIMVDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTN ESFARASLKNAKIVVFPDNTTIFEEILAGRADLMMTDAIETRLQEKRHPGLCAVHPDKPFTFSEKAFLLPQGDEVFKAFV DQWLHLRLNDGTYARISATWIR
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=25, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 28662; Mature: 28662
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHRRLKALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGK CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCC FEGIDIDLANDLGTALGVKVEFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSI CCCEEEEECCCCCHHHCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCEEEEE PIMVDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTNESFARASLKNAKIVVFPDNT EEEECCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEECCCC TIFEEILAGRADLMMTDAIETRLQEKRHPGLCAVHPDKPFTFSEKAFLLPQGDEVFKAFV HHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHH DQWLHLRLNDGTYARISATWIR HHEEEEEECCCCEEEEEEEECC >Mature Secondary Structure MIHRRLKALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGK CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCC FEGIDIDLANDLGTALGVKVEFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSI CCCEEEEECCCCCHHHCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCEEEEE PIMVDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTNESFARASLKNAKIVVFPDNT EEEECCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEECCCC TIFEEILAGRADLMMTDAIETRLQEKRHPGLCAVHPDKPFTFSEKAFLLPQGDEVFKAFV HHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHH DQWLHLRLNDGTYARISATWIR HHEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]