| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424011
Identifier: 158424011
GI number: 158424011
Start: 2713447
End: 2714355
Strand: Direct
Name: 158424011
Synonym: AZC_2387
Alternate gene names: NA
Gene position: 2713447-2714355 (Clockwise)
Preceding gene: 158424010
Following gene: 158424014
Centisome position: 50.53
GC content: 69.2
Gene sequence:
>909_bases ATGCCCGACCTTGCCGACCTCTACCCGGGCTTCGAGGCCCATAACATCGATACGGCGGCCGGCCGCATCTTCGTGCGCAC CGGCGGCTCGGGCACGCCGCTCCTGCTGCTGCACGGTTTCCCGCAGACCGGCGTCATGTGGCACAAGGTGGCGCCGGAGC TCGCGAAGACCCACAGCCTCGTCATCGCCGACCTGCCCGGCTACGGCTGGAGCGCCGCGCCCGAGCCCGGCCGCGATCAT GCGCCTTATTCCAAGCGCGCCATGGGAGAAGCCATGGTGCGGGTGATGGAGCATCTGGGCCACGCCCATTTCGCGCTCAT GGGGCACGACCGGGGGGCGCGCGTCGGCTATCGCATCGGCCTCGACCATCCCGGGCGGCTCGACCGTCTCGTGGTGCTCG ACATCGTGCCCACCATGGCCATGTGGCACGGCATGGACCGCAGCCGGGCCATGTCCGTCTATCACTGGATGTTCCTCGCC CAGCCCCATCCGCTGCCGGAGACACTGATCGGCAAGGATCCCGGCTTCTATTTCGACTGGACGCTGGCGAGTTGGACCCG CGACAAGGATCTCTCCGCCTTCAATCCCAAGGCGCTCGCCCATTACCGGGCCTCCTGCGCCGTGCCCGAGCGCATCCGGG CCATGTGCGAGGACTATCGGGCCGGGGCCACCATCGACCTTGCCCATGACGAGGCGGATCGCGCGGCGGGGCGCACCATC GATTGTCCGGTGCTGGCGGTGTGGGGGGCGAGCGGCATTCCCGCCAAGGGCGAAAGCCCGCTCAATGCCTGGCGCGCCTT TGCCCCGGAGGTGACAGGGCAGGCGGTCGAAAGCGGGCATTTCGTCTGCGAGGAAACGCCCGAGGCGGTGCTGGCCGCCG TCACGCCCTTCCTCGCGCAGGGACGCTGA
Upstream 100 bases:
>100_bases CTGCAACGGCGGGACACCAGTCCCGCCGTTTTGCGTTGTGCGGGTGGTGGCGCGCCCGACGGCGTGCGACGCTGACCGAA AATGCGCCGGAGGACTGCCC
Downstream 100 bases:
>100_bases GGCGGCTCAGGTCAGCAGGGCGACAAGCCAGTCCGGATGGACAGACCAGCCGGCGAAACCGGCGGTGCCCATGAAGAAGC CGTAAGCCCCGAAGCCCCAG
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPDLADLYPGFEAHNIDTAAGRIFVRTGGSGTPLLLLHGFPQTGVMWHKVAPELAKTHSLVIADLPGYGWSAAPEPGRDH APYSKRAMGEAMVRVMEHLGHAHFALMGHDRGARVGYRIGLDHPGRLDRLVVLDIVPTMAMWHGMDRSRAMSVYHWMFLA QPHPLPETLIGKDPGFYFDWTLASWTRDKDLSAFNPKALAHYRASCAVPERIRAMCEDYRAGATIDLAHDEADRAAGRTI DCPVLAVWGASGIPAKGESPLNAWRAFAPEVTGQAVESGHFVCEETPEAVLAAVTPFLAQGR
Sequences:
>Translated_302_residues MPDLADLYPGFEAHNIDTAAGRIFVRTGGSGTPLLLLHGFPQTGVMWHKVAPELAKTHSLVIADLPGYGWSAAPEPGRDH APYSKRAMGEAMVRVMEHLGHAHFALMGHDRGARVGYRIGLDHPGRLDRLVVLDIVPTMAMWHGMDRSRAMSVYHWMFLA QPHPLPETLIGKDPGFYFDWTLASWTRDKDLSAFNPKALAHYRASCAVPERIRAMCEDYRAGATIDLAHDEADRAAGRTI DCPVLAVWGASGIPAKGESPLNAWRAFAPEVTGQAVESGHFVCEETPEAVLAAVTPFLAQGR >Mature_301_residues PDLADLYPGFEAHNIDTAAGRIFVRTGGSGTPLLLLHGFPQTGVMWHKVAPELAKTHSLVIADLPGYGWSAAPEPGRDHA PYSKRAMGEAMVRVMEHLGHAHFALMGHDRGARVGYRIGLDHPGRLDRLVVLDIVPTMAMWHGMDRSRAMSVYHWMFLAQ PHPLPETLIGKDPGFYFDWTLASWTRDKDLSAFNPKALAHYRASCAVPERIRAMCEDYRAGATIDLAHDEADRAAGRTID CPVLAVWGASGIPAKGESPLNAWRAFAPEVTGQAVESGHFVCEETPEAVLAAVTPFLAQGR
Specific function: Catalyzes the hydrolytic defluorination of fluoroacetate to produce glycolate. Has low activity towards chloroacetate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324392, Length=121, Percent_Identity=32.2314049586777, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 33003; Mature: 32872
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLADLYPGFEAHNIDTAAGRIFVRTGGSGTPLLLLHGFPQTGVMWHKVAPELAKTHSL CCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEHHHHCHHHHHCCEE VIADLPGYGWSAAPEPGRDHAPYSKRAMGEAMVRVMEHLGHAHFALMGHDRGARVGYRIG EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEC LDHPGRLDRLVVLDIVPTMAMWHGMDRSRAMSVYHWMFLAQPHPLPETLIGKDPGFYFDW CCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCHHHCCCCCCEEEEE TLASWTRDKDLSAFNPKALAHYRASCAVPERIRAMCEDYRAGATIDLAHDEADRAAGRTI EECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCC DCPVLAVWGASGIPAKGESPLNAWRAFAPEVTGQAVESGHFVCEETPEAVLAAVTPFLAQ CCCEEEEECCCCCCCCCCCHHHHHHHHCCHHCCHHHHCCCEEECCCHHHHHHHHHHHHHC GR CC >Mature Secondary Structure PDLADLYPGFEAHNIDTAAGRIFVRTGGSGTPLLLLHGFPQTGVMWHKVAPELAKTHSL CCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEHHHHCHHHHHCCEE VIADLPGYGWSAAPEPGRDHAPYSKRAMGEAMVRVMEHLGHAHFALMGHDRGARVGYRIG EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEC LDHPGRLDRLVVLDIVPTMAMWHGMDRSRAMSVYHWMFLAQPHPLPETLIGKDPGFYFDW CCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCHHHCCCCCCEEEEE TLASWTRDKDLSAFNPKALAHYRASCAVPERIRAMCEDYRAGATIDLAHDEADRAAGRTI EECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCC DCPVLAVWGASGIPAKGESPLNAWRAFAPEVTGQAVESGHFVCEETPEAVLAAVTPFLAQ CCCEEEEECCCCCCCCCCCHHHHHHHHCCHHCCHHHHCCCEEECCCHHHHHHHHHHHHHC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA