| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is isiB [H]
Identifier: 158423997
GI number: 158423997
Start: 2699621
End: 2700103
Strand: Reverse
Name: isiB [H]
Synonym: AZC_2373
Alternate gene names: 158423997
Gene position: 2700103-2699621 (Counterclockwise)
Preceding gene: 158423998
Following gene: 158423996
Centisome position: 50.28
GC content: 64.18
Gene sequence:
>483_bases ATGATCGTCAACGTGATTTTCGGTTCGGACGGGGGGGCCACCAAGGCCGTTGCCGCCCGCATTTGCAAGAAGGCCTCGGG CCGCTCCATCGACATCAAGGCCGCGAGCGTCGGTGATTTCGAGCAGTGCGACCTGCTCATCCTCGGTTCGCCCACCTATG GGGCGGGCGATCTCCAGTCCGACTGGGAAGCCAATATCGACACGCTCAAGTCCGCCAACCTCGCGGGCAAGAAGGTGGCC CTCTTCGGCACGGGAGACCAGGCCACCTATCCGGACTCCTTCGTGGACGCCATGGGCCTCCTCTATGATCTCGTGGCGGA GAAGGGGGCCGCCGTCGTCGGCTTCACCGAGACCTCGGGCTATGACTTCACCGGTTCGCTGGCCGAGCGCGACGGGCAGT TCGTTGGCCTTGCCATCGACCCCGACACCCAGTCCTCCCTCACCGAAAAACGGGTCACCGCATGGCTTGCGAAGCTGCTC TAG
Upstream 100 bases:
>100_bases CTTCCGGTGCCTCAGCCTTGGGCCTGCCTCACGGATGCGCAGGTCCAGCGGGCGACAGGGCAGGGCGGCTGGGCCGCCGG CCGCACACGGAAGAAGGCAG
Downstream 100 bases:
>100_bases ACCAGGTGACGCTGCGCATCTTCAACCACAATGTCTATGAGTTCCGGCGTGGCGTCCGCTGCCTGTTCCTCATGACCATG GCCGCCCATGACCTGCCGCC
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MIVNVIFGSDGGATKAVAARICKKASGRSIDIKAASVGDFEQCDLLILGSPTYGAGDLQSDWEANIDTLKSANLAGKKVA LFGTGDQATYPDSFVDAMGLLYDLVAEKGAAVVGFTETSGYDFTGSLAERDGQFVGLAIDPDTQSSLTEKRVTAWLAKLL
Sequences:
>Translated_160_residues MIVNVIFGSDGGATKAVAARICKKASGRSIDIKAASVGDFEQCDLLILGSPTYGAGDLQSDWEANIDTLKSANLAGKKVA LFGTGDQATYPDSFVDAMGLLYDLVAEKGAAVVGFTETSGYDFTGSLAERDGQFVGLAIDPDTQSSLTEKRVTAWLAKLL >Mature_160_residues MIVNVIFGSDGGATKAVAARICKKASGRSIDIKAASVGDFEQCDLLILGSPTYGAGDLQSDWEANIDTLKSANLAGKKVA LFGTGDQATYPDSFVDAMGLLYDLVAEKGAAVVGFTETSGYDFTGSLAERDGQFVGLAIDPDTQSSLTEKRVTAWLAKLL
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=164, Percent_Identity=42.0731707317073, Blast_Score=124, Evalue=3e-30, Organism=Escherichia coli, GI1789262, Length=166, Percent_Identity=40.3614457831325, Blast_Score=114, Evalue=2e-27,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 16707; Mature: 16707
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNVIFGSDGGATKAVAARICKKASGRSIDIKAASVGDFEQCDLLILGSPTYGAGDLQS CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCC DWEANIDTLKSANLAGKKVALFGTGDQATYPDSFVDAMGLLYDLVAEKGAAVVGFTETSG CCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC YDFTGSLAERDGQFVGLAIDPDTQSSLTEKRVTAWLAKLL CCEECCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MIVNVIFGSDGGATKAVAARICKKASGRSIDIKAASVGDFEQCDLLILGSPTYGAGDLQS CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCC DWEANIDTLKSANLAGKKVALFGTGDQATYPDSFVDAMGLLYDLVAEKGAAVVGFTETSG CCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC YDFTGSLAERDGQFVGLAIDPDTQSSLTEKRVTAWLAKLL CCEECCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3121586; 6406674; 10610791; 10610792; 1907844 [H]