| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423962
Identifier: 158423962
GI number: 158423962
Start: 2665291
End: 2666514
Strand: Direct
Name: 158423962
Synonym: AZC_2338
Alternate gene names: NA
Gene position: 2665291-2666514 (Clockwise)
Preceding gene: 158423959
Following gene: 158423963
Centisome position: 49.64
GC content: 64.79
Gene sequence:
>1224_bases ATGAAGACCAAGGCCCTCGCGGCGCCCTTTGCGGCGGCGCTCTTTGCCAGCGCCATGATCGTGACCCCAGCGGCCGCCCA ATATGCCGGCGGCGGGGTGAAGATCGGCGTGCTCACCGACATGTCGGGCGCCTATTCGGATCTCGCCGGCGCTGGCTCGG TGGAAGCCGCGAAGATGGCCATCGAGGATTTCGGCAGGCCCATCAACGGCAAGCCGGTGGAACTGGTCTCCGCAGATCAC CAGAACAAGGCCGACATCGCCTCCGCTACCGCCCGCAAGTGGTACGACACGCAGGACGTGGATGCGATCTTCGACATCAA CGGCTCGGTGGCCGCGCTCGCGGTGCGCGAGGTCTCCCGCGAGAAGGGCAAGGTCGACATCAATTCCGGCGCCGCTGCGA TGGCGCTAACCAACAAGGCCTGCTCGCCCACCGGCCTGCACTGGACCTATGACGTCTATTCGCTGGCCGCCGGCACCGGC AACGCGCTGGTGAGCGAGGGTTTCAAGACCTGGTACTTCATCACGGCGGACTACACCTTCGGCCACGATCTTGAGAACCA GGTGGCGAAGATCGTGAAGGAGAAGGGCGGCACGGTGAAGGGCTCGGTGGCCCATCCGTTCGGCTCTCCGGACGTGTCCT CCTACCTGCTTCAGGCGCAGGGCTCGGGGGCCAAGATCATCGCAATGGCGAACGCTGGCGCCGACACGATCAACACCATC AAGCAGGCGCGCGAATTCGGCATCACGCAGGGCGGCCAGACGCTGGCGGCGCTGCTGCTGTTCATAACGGACATCCACTC CGTGGGCCTCGAAGCCGCACAGGGCATGGTGCTGACCACCGGCTTCTACTGGGACACGGACGAGAAGACCCGCGCCTTCT CCAAGCGCTTCGCCGCCCGGATGAACGGCAAGATGCCCACCATGGTGCATGCGGGCGTCTATTCGTCGGTCCTGCATTAT CTCAAGGCCGCGGAAGCCGCCGGCACCGACGACGGCGAGAAGGTGGTGGCCAAGATGCGCGAGTTGCCCATCGACGACAT GTTCGCGAAGAACGGCAAGATCCGTGCGGACGGCCGCATGGTGCACGACATGTATCTGGCGAAGGTGAAGTCCCCCAAGG AGTCGAAGGGCGCGTGGGACTATTACCAGATCGTCCGCGTCATCCCCGGCGACGAGGCCTTCCAGCCGCTCAGCGAGAGC ACCTGCCCGCTCGTCAAGAAGTGA
Upstream 100 bases:
>100_bases ATTGAGACGCAGTTCAACGCGCATCACGACAGTGATCCTGCGCGTCCTTCGTCATCGACAGCCAGGCTGCCGCATCCCGC TTCAGCCCCCGGGAGGAAAC
Downstream 100 bases:
>100_bases GCCTCCGGCGTGCCGGGCCGCTCGAGCCCGGCCGCCCGTTGGGGGGAACCGGCCGCGCCGGATTGTCCGTCCCCTTTAGC TTCAGGCCGCAGGACGTTCC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKTKALAAPFAAALFASAMIVTPAAAQYAGGGVKIGVLTDMSGAYSDLAGAGSVEAAKMAIEDFGRPINGKPVELVSADH QNKADIASATARKWYDTQDVDAIFDINGSVAALAVREVSREKGKVDINSGAAAMALTNKACSPTGLHWTYDVYSLAAGTG NALVSEGFKTWYFITADYTFGHDLENQVAKIVKEKGGTVKGSVAHPFGSPDVSSYLLQAQGSGAKIIAMANAGADTINTI KQAREFGITQGGQTLAALLLFITDIHSVGLEAAQGMVLTTGFYWDTDEKTRAFSKRFAARMNGKMPTMVHAGVYSSVLHY LKAAEAAGTDDGEKVVAKMRELPIDDMFAKNGKIRADGRMVHDMYLAKVKSPKESKGAWDYYQIVRVIPGDEAFQPLSES TCPLVKK
Sequences:
>Translated_407_residues MKTKALAAPFAAALFASAMIVTPAAAQYAGGGVKIGVLTDMSGAYSDLAGAGSVEAAKMAIEDFGRPINGKPVELVSADH QNKADIASATARKWYDTQDVDAIFDINGSVAALAVREVSREKGKVDINSGAAAMALTNKACSPTGLHWTYDVYSLAAGTG NALVSEGFKTWYFITADYTFGHDLENQVAKIVKEKGGTVKGSVAHPFGSPDVSSYLLQAQGSGAKIIAMANAGADTINTI KQAREFGITQGGQTLAALLLFITDIHSVGLEAAQGMVLTTGFYWDTDEKTRAFSKRFAARMNGKMPTMVHAGVYSSVLHY LKAAEAAGTDDGEKVVAKMRELPIDDMFAKNGKIRADGRMVHDMYLAKVKSPKESKGAWDYYQIVRVIPGDEAFQPLSES TCPLVKK >Mature_407_residues MKTKALAAPFAAALFASAMIVTPAAAQYAGGGVKIGVLTDMSGAYSDLAGAGSVEAAKMAIEDFGRPINGKPVELVSADH QNKADIASATARKWYDTQDVDAIFDINGSVAALAVREVSREKGKVDINSGAAAMALTNKACSPTGLHWTYDVYSLAAGTG NALVSEGFKTWYFITADYTFGHDLENQVAKIVKEKGGTVKGSVAHPFGSPDVSSYLLQAQGSGAKIIAMANAGADTINTI KQAREFGITQGGQTLAALLLFITDIHSVGLEAAQGMVLTTGFYWDTDEKTRAFSKRFAARMNGKMPTMVHAGVYSSVLHY LKAAEAAGTDDGEKVVAKMRELPIDDMFAKNGKIRADGRMVHDMYLAKVKSPKESKGAWDYYQIVRVIPGDEAFQPLSES TCPLVKK
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43202; Mature: 43202
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKALAAPFAAALFASAMIVTPAAAQYAGGGVKIGVLTDMSGAYSDLAGAGSVEAAKMA CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCHHHHCCCCCHHHHHHH IEDFGRPINGKPVELVSADHQNKADIASATARKWYDTQDVDAIFDINGSVAALAVREVSR HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH EKGKVDINSGAAAMALTNKACSPTGLHWTYDVYSLAAGTGNALVSEGFKTWYFITADYTF HCCCEEECCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCCCHHHHCCCEEEEEEEECCCC GHDLENQVAKIVKEKGGTVKGSVAHPFGSPDVSSYLLQAQGSGAKIIAMANAGADTINTI CCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHH KQAREFGITQGGQTLAALLLFITDIHSVGLEAAQGMVLTTGFYWDTDEKTRAFSKRFAAR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHH MNGKMPTMVHAGVYSSVLHYLKAAEAAGTDDGEKVVAKMRELPIDDMFAKNGKIRADGRM HCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCEEEECCCH VHDMYLAKVKSPKESKGAWDYYQIVRVIPGDEAFQPLSESTCPLVKK HHHHHHHHHCCCCCCCCCCCHHHEEEECCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MKTKALAAPFAAALFASAMIVTPAAAQYAGGGVKIGVLTDMSGAYSDLAGAGSVEAAKMA CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCHHHHCCCCCHHHHHHH IEDFGRPINGKPVELVSADHQNKADIASATARKWYDTQDVDAIFDINGSVAALAVREVSR HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH EKGKVDINSGAAAMALTNKACSPTGLHWTYDVYSLAAGTGNALVSEGFKTWYFITADYTF HCCCEEECCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCCCHHHHCCCEEEEEEEECCCC GHDLENQVAKIVKEKGGTVKGSVAHPFGSPDVSSYLLQAQGSGAKIIAMANAGADTINTI CCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHH KQAREFGITQGGQTLAALLLFITDIHSVGLEAAQGMVLTTGFYWDTDEKTRAFSKRFAAR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHH MNGKMPTMVHAGVYSSVLHYLKAAEAAGTDDGEKVVAKMRELPIDDMFAKNGKIRADGRM HCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCEEEECCCH VHDMYLAKVKSPKESKGAWDYYQIVRVIPGDEAFQPLSESTCPLVKK HHHHHHHHHCCCCCCCCCCCHHHEEEECCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA