| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is catC1 [H]
Identifier: 158423963
GI number: 158423963
Start: 2666644
End: 2666919
Strand: Direct
Name: catC1 [H]
Synonym: AZC_2339
Alternate gene names: 158423963
Gene position: 2666644-2666919 (Clockwise)
Preceding gene: 158423962
Following gene: 158423964
Centisome position: 49.66
GC content: 61.96
Gene sequence:
>276_bases ATGCTGTTCCACGTCGAAATGCAGGTGAACATTCCGCACGATTTTCCGGCCGAGAAGGCGGATGCGATAAAGGCGGCGGA GAAGGCCTATGCGCAGGACCTCCAGCGGCAGGGCAAGTGGCTCCACCTCTGGCGCATCGCCGGGCGCTACGCCAACGTGT CCATCTTCGACGTGGAGAGCGTGGACGAACTGCACCAGCTTCTCTCCTCGCTCCCGCTGTTCCCGTTCATGGACATCAAG GTGACGCCACTCGCCCGTCATCCCTCCGCCATCTGA
Upstream 100 bases:
>100_bases GGCCGCCCGTTGGGGGGAACCGGCCGCGCCGGATTGTCCGTCCCCTTTAGCTTCAGGCCGCAGGACGTTCCGTCCGCCGC CCCTCACGAGAGCCAGGGTC
Downstream 100 bases:
>100_bases GGACGCAGGCCTGAAGGGGACGCGCTCACATGCCCTACATGATCGAGACTTTCGACAAGCCCGGCACACTGGACCTGCGC GCCCGGGAGCGCGATGCACA
Product: methylmuconolactone isomerase
Products: NA
Alternate protein names: MIase 1 [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLFHVEMQVNIPHDFPAEKADAIKAAEKAYAQDLQRQGKWLHLWRIAGRYANVSIFDVESVDELHQLLSSLPLFPFMDIK VTPLARHPSAI
Sequences:
>Translated_91_residues MLFHVEMQVNIPHDFPAEKADAIKAAEKAYAQDLQRQGKWLHLWRIAGRYANVSIFDVESVDELHQLLSSLPLFPFMDIK VTPLARHPSAI >Mature_91_residues MLFHVEMQVNIPHDFPAEKADAIKAAEKAYAQDLQRQGKWLHLWRIAGRYANVSIFDVESVDELHQLLSSLPLFPFMDIK VTPLARHPSAI
Specific function: Unknown
COG id: COG4829
COG function: function code Q; Muconolactone delta-isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the muconolactone Delta-isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR003464 - ProDom: PD006619 [H]
Pfam domain/function: PF02426 MIase [H]
EC number: =5.3.3.4 [H]
Molecular weight: Translated: 10423; Mature: 10423
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHVEMQVNIPHDFPAEKADAIKAAEKAYAQDLQRQGKWLHLWRIAGRYANVSIFDVES CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHC VDELHQLLSSLPLFPFMDIKVTPLARHPSAI HHHHHHHHHHCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MLFHVEMQVNIPHDFPAEKADAIKAAEKAYAQDLQRQGKWLHLWRIAGRYANVSIFDVES CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHC VDELHQLLSSLPLFPFMDIKVTPLARHPSAI HHHHHHHHHHCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9260969; 9473520 [H]