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The map label for this gene is exoD

Identifier: 158423933

GI number: 158423933

Start: 2633973

End: 2634590

Strand: Reverse

Name: exoD

Synonym: AZC_2309

Alternate gene names: NA

Gene position: 2634590-2633973 (Counterclockwise)

Preceding gene: 158423934

Following gene: 158423932

Centisome position: 49.06

GC content: 68.12

Gene sequence:

>618_bases
ATGAACGAGGCCCCGGTGGACCATCGCACTCCCCGCACGTCCGAACTGCTTGCCGCCGTCCTAGCCGCCCACACAAGCGA
GCGCGTTTCGGTGGGCGATCTTCTGGACGCGCTGCGCAATCGCGCGTTCGGCATCAGCTTCCTGCTGTTCGGCCTGCCCA
ACTGCATTCCCATGCCGCCCGGCATTCCGGTGATCTGCGGCATCATTCTCGCGCTCATCGGCCTTCAGATGGCCATGGGC
CGGCAGGAGCTGTGGCTGCCGCAGGCGATTTCCAAGCGCACCTTCTCCCGCTCGGTGCTGGAGACCATCGTCAACCGCTC
TCGGTCCTGGATCCTCTGGTTCGAGCGCTGGTCGCGGCCGCGCATGGAGGTGTTCGCCGGGCCGACCTCGCGCCGGGTCG
TCGGGGCGCTGGTGGTGCTCCTCGGCTTCGTCCTGCTGCTGCCCATCCCCTTCCTCGGCAACATGCCGCCCGGCATCGCG
GTGTGCATCCTCGGCCTTGGTCTCGTGGAGCGGGACGGGGCGGTGATCCTCGGCGGCTTCTTCGCCACCGCCATCGGCAC
GCTGGTGGCGTTCGCCATGACCTGGGCCATCTGGCAGGGCGCGGTCGCCATCTTCTGA

Upstream 100 bases:

>100_bases
TGATCTGTTCCCTATGGGAATGTGTCTGGGGGCAGGGCGCCCGGTTTCGCTGCGGGCGCCCTGACACCGCCGCTTTATCA
GTGTTAAAGAGGGGGCCGTC

Downstream 100 bases:

>100_bases
CGGCCCTTTTCCTCCGCGCGCATGCCCGCTAAGAGCGGGCGCCCAACGCAGCCGGGCCTCTGGCGAGGCCCCTCGAGGAC
CCATGCGCGTCGACGCCTTC

Product: exopolysaccharide synthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNEAPVDHRTPRTSELLAAVLAAHTSERVSVGDLLDALRNRAFGISFLLFGLPNCIPMPPGIPVICGIILALIGLQMAMG
RQELWLPQAISKRTFSRSVLETIVNRSRSWILWFERWSRPRMEVFAGPTSRRVVGALVVLLGFVLLLPIPFLGNMPPGIA
VCILGLGLVERDGAVILGGFFATAIGTLVAFAMTWAIWQGAVAIF

Sequences:

>Translated_205_residues
MNEAPVDHRTPRTSELLAAVLAAHTSERVSVGDLLDALRNRAFGISFLLFGLPNCIPMPPGIPVICGIILALIGLQMAMG
RQELWLPQAISKRTFSRSVLETIVNRSRSWILWFERWSRPRMEVFAGPTSRRVVGALVVLLGFVLLLPIPFLGNMPPGIA
VCILGLGLVERDGAVILGGFFATAIGTLVAFAMTWAIWQGAVAIF
>Mature_205_residues
MNEAPVDHRTPRTSELLAAVLAAHTSERVSVGDLLDALRNRAFGISFLLFGLPNCIPMPPGIPVICGIILALIGLQMAMG
RQELWLPQAISKRTFSRSVLETIVNRSRSWILWFERWSRPRMEVFAGPTSRRVVGALVVLLGFVLLLPIPFLGNMPPGIA
VCILGLGLVERDGAVILGGFFATAIGTLVAFAMTWAIWQGAVAIF

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 22288; Mature: 22288

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAPVDHRTPRTSELLAAVLAAHTSERVSVGDLLDALRNRAFGISFLLFGLPNCIPMPP
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIPVICGIILALIGLQMAMGRQELWLPQAISKRTFSRSVLETIVNRSRSWILWFERWSRP
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCC
RMEVFAGPTSRRVVGALVVLLGFVLLLPIPFLGNMPPGIAVCILGLGLVERDGAVILGGF
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHH
FATAIGTLVAFAMTWAIWQGAVAIF
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEAPVDHRTPRTSELLAAVLAAHTSERVSVGDLLDALRNRAFGISFLLFGLPNCIPMPP
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIPVICGIILALIGLQMAMGRQELWLPQAISKRTFSRSVLETIVNRSRSWILWFERWSRP
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCC
RMEVFAGPTSRRVVGALVVLLGFVLLLPIPFLGNMPPGIAVCILGLGLVERDGAVILGGF
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHH
FATAIGTLVAFAMTWAIWQGAVAIF
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]