| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yozG [H]
Identifier: 158423911
GI number: 158423911
Start: 2611491
End: 2611727
Strand: Reverse
Name: yozG [H]
Synonym: AZC_2287
Alternate gene names: 158423911
Gene position: 2611727-2611491 (Counterclockwise)
Preceding gene: 158423912
Following gene: 158423903
Centisome position: 48.64
GC content: 54.85
Gene sequence:
>237_bases ATGTCTATCCGGGTGCGCTTGGGCGTGATGCTCGCGGAACGCAACGTGAAGTCCAAAGACCTGGCCGAACATGTCGGGAT CACGGAGGCCAATCTTTCTCTTCTGAAACAGGGCAAGGTAAAGGGCGTCCGGTTTGAGACATTAGAGAAAATCTGCCAGT TTCTCCGTTGCCAGCCGGGTGATCTTCTGAGGTATGAAGAGGACGGATCGCCTGGTTCGGACATGGGGGAGGGATAA
Upstream 100 bases:
>100_bases CGCCCTGATTTTCGCAGGGACGGTCGCCGCCGTGGCCTGGGTCATGGCGGAGGCGATGGAGATCGCCGATGAGAACAAGC AGTTCGTCTAGGGGCGCTGA
Downstream 100 bases:
>100_bases TTGTCGCCGGAGTGAATAGTGCAGCTCGAATGGCCAAGGCCACGAACGGCACAATAATACGAAACGTAAAGCTGGCGCTT TTGCCTTTATATTACGATCA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSIRVRLGVMLAERNVKSKDLAEHVGITEANLSLLKQGKVKGVRFETLEKICQFLRCQPGDLLRYEEDGSPGSDMGEG
Sequences:
>Translated_78_residues MSIRVRLGVMLAERNVKSKDLAEHVGITEANLSLLKQGKVKGVRFETLEKICQFLRCQPGDLLRYEEDGSPGSDMGEG >Mature_77_residues SIRVRLGVMLAERNVKSKDLAEHVGITEANLSLLKQGKVKGVRFETLEKICQFLRCQPGDLLRYEEDGSPGSDMGEG
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 8649; Mature: 8518
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRVRLGVMLAERNVKSKDLAEHVGITEANLSLLKQGKVKGVRFETLEKICQFLRCQPG CCEEEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC DLLRYEEDGSPGSDMGEG CCEEECCCCCCCCCCCCC >Mature Secondary Structure SIRVRLGVMLAERNVKSKDLAEHVGITEANLSLLKQGKVKGVRFETLEKICQFLRCQPG CEEEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC DLLRYEEDGSPGSDMGEG CCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]