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The map label for this gene is araC [C]

Identifier: 158423903

GI number: 158423903

Start: 2603909

End: 2604673

Strand: Reverse

Name: araC [C]

Synonym: AZC_2279

Alternate gene names: 158423903

Gene position: 2604673-2603909 (Counterclockwise)

Preceding gene: 158423911

Following gene: 158423896

Centisome position: 48.51

GC content: 70.59

Gene sequence:

>765_bases
ATGTCTTTCCATGTCGCACCGTATCTCCCGGACCTCCGCGCGGGTGGGGTCATCGCACTACTCGCCGGTGACCAGTCCGG
CGCCGATGCCCTGCCGCGTCCGGCGGGCGAGGAAAGCGGCGATGTCCTGTCGGTGCACCTGCCCCACATGGGTCTCGTGC
TGGCCATTTCCCAGGCGCGGGCGGCGGGCCAGACCCTCGTCGGTCTGGACAGCCTGCTGGCGCGTCCCGCCGACCACCGC
CGCACCCTCGTGGACGACCGTGTGGTTGCGCAACTCTCCCAGGCGCTCCAGAGCGCGGAGGTGGATTCGGCCGGCGGCCT
CCATGCGGATGCGCTGCGCCTCGCCATCGTCGCCCGCATCCTCACTCTCGACGGACAGTCCCATGCGCCGCAGGTGGACG
AGGCTTTGCCGGCACCGGCTCCCGCGCGGGTTCGGCCCGGCCTGCCGAAGTGGCGCCTGAAGCGTGTCATGGCGCATGTG
CAGGAGCGTCTCTGCGAGACGGTGACCCTCGCCGACATGGCCGCGGCGGCGGGCCTCAGCCGCATGCATTTTGCCGCCCA
GTTCCGCATCGCGACGGGGCTTCGCCCGCACGAGTATCTGCTGAAGTGCCGCGTCGAGCGGGCGCAGCAGCTCATGCGCG
AGAGCACCGAGCCGCTGGTCCAGATCGCGCTGTCGGTGGGTTTCCAGACGCAGGCGCATTTCACCACCGTCTTCCGGCGC
TTCGCCGGCACCACCCCGCACCGCTGGCGCAGCATGCAGGGATGA

Upstream 100 bases:

>100_bases
ACGTAGGATGGAGGGGTGAGCGCCGTTTCCCCATGCTGATGTCACCGAGCCGCTGATCCGGCCCGAACGTGATCCACCTT
CAAGCACGTGGGGTATTCGC

Downstream 100 bases:

>100_bases
GGCGTGGATGGTCCGGCCCGGCGGAGAGGGACGGACGGCATTCGGCCGTCCCCTCCCGCTCAGCCCCGTCCGGGGGCCAG
ACGCTCCACGAGGGCACGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator Protein; Proline Utilization Regulator; AraC Family Transcription Regulator; Transcriptional Regulator Protein AraC Family; Transcription Regulator; Transcriptional Regulator AraC-Type; Transcriptional Regulator Arac Family; PAS Sensor Protein; AraC Family Regulatory Protein; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix- Domain Containing Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Helix-Turn-Helix AraC Type; AraC-Type Trancriptional Regulator; Arac Family Transcriptional Regulator; AraC Family Helix-Turn-Helix Transcriptional Regulator; AraC Family Transcription Regulator Protein; Xyls/AraC-Type Transcriptional Activator

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSFHVAPYLPDLRAGGVIALLAGDQSGADALPRPAGEESGDVLSVHLPHMGLVLAISQARAAGQTLVGLDSLLARPADHR
RTLVDDRVVAQLSQALQSAEVDSAGGLHADALRLAIVARILTLDGQSHAPQVDEALPAPAPARVRPGLPKWRLKRVMAHV
QERLCETVTLADMAAAAGLSRMHFAAQFRIATGLRPHEYLLKCRVERAQQLMRESTEPLVQIALSVGFQTQAHFTTVFRR
FAGTTPHRWRSMQG

Sequences:

>Translated_254_residues
MSFHVAPYLPDLRAGGVIALLAGDQSGADALPRPAGEESGDVLSVHLPHMGLVLAISQARAAGQTLVGLDSLLARPADHR
RTLVDDRVVAQLSQALQSAEVDSAGGLHADALRLAIVARILTLDGQSHAPQVDEALPAPAPARVRPGLPKWRLKRVMAHV
QERLCETVTLADMAAAAGLSRMHFAAQFRIATGLRPHEYLLKCRVERAQQLMRESTEPLVQIALSVGFQTQAHFTTVFRR
FAGTTPHRWRSMQG
>Mature_253_residues
SFHVAPYLPDLRAGGVIALLAGDQSGADALPRPAGEESGDVLSVHLPHMGLVLAISQARAAGQTLVGLDSLLARPADHRR
TLVDDRVVAQLSQALQSAEVDSAGGLHADALRLAIVARILTLDGQSHAPQVDEALPAPAPARVRPGLPKWRLKRVMAHVQ
ERLCETVTLADMAAAAGLSRMHFAAQFRIATGLRPHEYLLKCRVERAQQLMRESTEPLVQIALSVGFQTQAHFTTVFRRF
AGTTPHRWRSMQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27435; Mature: 27304

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFHVAPYLPDLRAGGVIALLAGDQSGADALPRPAGEESGDVLSVHLPHMGLVLAISQAR
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AAGQTLVGLDSLLARPADHRRTLVDDRVVAQLSQALQSAEVDSAGGLHADALRLAIVARI
HHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTLDGQSHAPQVDEALPAPAPARVRPGLPKWRLKRVMAHVQERLCETVTLADMAAAAGLS
HHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHFAAQFRIATGLRPHEYLLKCRVERAQQLMRESTEPLVQIALSVGFQTQAHFTTVFRR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHH
FAGTTPHRWRSMQG
HHCCCCHHHCCCCC
>Mature Secondary Structure 
SFHVAPYLPDLRAGGVIALLAGDQSGADALPRPAGEESGDVLSVHLPHMGLVLAISQAR
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AAGQTLVGLDSLLARPADHRRTLVDDRVVAQLSQALQSAEVDSAGGLHADALRLAIVARI
HHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTLDGQSHAPQVDEALPAPAPARVRPGLPKWRLKRVMAHVQERLCETVTLADMAAAAGLS
HHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHFAAQFRIATGLRPHEYLLKCRVERAQQLMRESTEPLVQIALSVGFQTQAHFTTVFRR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHH
FAGTTPHRWRSMQG
HHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA