| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yhjE [C]
Identifier: 158423721
GI number: 158423721
Start: 2413076
End: 2414392
Strand: Reverse
Name: yhjE [C]
Synonym: AZC_2097
Alternate gene names: 158423721
Gene position: 2414392-2413076 (Counterclockwise)
Preceding gene: 158423729
Following gene: 158423720
Centisome position: 44.96
GC content: 67.5
Gene sequence:
>1317_bases ATGGCGCTTACCGCATCGACCATGGAGCACGACGCCGTCGTCCTTCACAGCCACGGGGGACGGGTCGACCCAGGAGATAT CGCGATCGGGGTCATCATCGGCCGGACGTCGGAGTTCTTCGACTTCTTCGTCTATGCGATCGCGTCCGTCATTGTCTTTC CCCGCCTGCTCTTTCCCGAAGCCGATCCGCTCACCGGCACGCTCTATTCCTTCGGCCTCTTCGCCCTCGCCTTCATCGCC CGCCCCTTCGGCACGGCCCTCTTCCTCGCCGTGGACCGCACCTGGGGCCGGGGCGCCAAGCTCACCATCGCCCTCTTCCT GCTCGGCACAAGCACGGTCGCCATCGCCTTCCTGCCCGCGCGGGATGTGATCGGCGTCTCGGCGGTCTGGCTTTTGGCCT CGGCCCGCATCGCCCAGGGCCTGGCCTGGGGTGGCGCGTGGGACGGGCTGGCGCCGCTGCTGGCCATGAACGCGCCGGAG GGCCGCCGCGGCTGGTACGCCATGCTGCCCCAGCTCGGGGCGCCGCTCGGCCTTATCGTGGCGAGCATCCTGTTCGCCTA TTTCGCCGGAAGCCTCTCGACGGAGGACTTCTACTCGTGGGGCTGGCGCTATCCCTTCTTCGTGGCCTTCGCCATCAACG TGGTCGCCCTCTTCGCCAGGCTGCGCATGGCGGTGACGCCTGAGTATGAGCAGCTCTTCGAGCGCGGCGACCTCCAGCCG GCGCCCGTGCTTGAAACGGTGCGGGAGGAAGGCTCGGGCATCGCGGTCGGCACCTTTGCCCCGCTCGCGACCTTCGCCCT GTTCCACATGGTGACCGTGTTCCCCCTCTCCTGGGTCTATCTCTTCACCTCGGAGGGCGCGACGCGCTTCCTCGTGGTTG AGACGATCGGCGCCATGGTGGGCATCATCGCCATCGTGGCCTCGGGGCGAATCGCGGACAAGGTGGGCCGCCGTACGCTG CTCGGCGCCTCTGCCGCGGCCATCGCCGTCTTCAGCGGTTTTGCACCGCAACTGCTGAATGGCGGCATTGCCGGTGAGCT AACCTTCATGGTGCTCGGCTTCGCGTTGCTCGGCATTTCGTTCGGTCAGTCGTCGGGCGCGGTGGCGTCCCGCTTCGCCA ACCGCTACCGCTACACGGCCTCCGCCATCACGAACGACTTCGCCTGGCTGTTCGGTGCCGGCTTCGCGCCGCTCGCGGCC CTGTTGCTTTCGAGCCACTTCGGTCTCGTCGCTGCCGGTGCCTACCTGCTCTCGGGTTGTGTGTGCACGTTGCTGGCCCT TCGCCTCAACAAGCGCCTCGAGATGGGCGGCGGCTGA
Upstream 100 bases:
>100_bases TCCGTAATCTCCTGATAGGGAACGTCACTTGATCGGCGCCAGAACCGGAACAGTGAGGTTCCCTTAGGGTTGAAACTCTC GTTGCAGGAGGGTTTGTGTC
Downstream 100 bases:
>100_bases GTCTCATCCCTTCTGACGCTTGCAACCTGCGGCTCCGGCACCCTGCCGGAGCCGTTTTCGTTTGAGGCCGGCGCCGGACG GCGCGGCGCCTCCCGCGCAT
Product: MFS permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MALTASTMEHDAVVLHSHGGRVDPGDIAIGVIIGRTSEFFDFFVYAIASVIVFPRLLFPEADPLTGTLYSFGLFALAFIA RPFGTALFLAVDRTWGRGAKLTIALFLLGTSTVAIAFLPARDVIGVSAVWLLASARIAQGLAWGGAWDGLAPLLAMNAPE GRRGWYAMLPQLGAPLGLIVASILFAYFAGSLSTEDFYSWGWRYPFFVAFAINVVALFARLRMAVTPEYEQLFERGDLQP APVLETVREEGSGIAVGTFAPLATFALFHMVTVFPLSWVYLFTSEGATRFLVVETIGAMVGIIAIVASGRIADKVGRRTL LGASAAAIAVFSGFAPQLLNGGIAGELTFMVLGFALLGISFGQSSGAVASRFANRYRYTASAITNDFAWLFGAGFAPLAA LLLSSHFGLVAAGAYLLSGCVCTLLALRLNKRLEMGGG
Sequences:
>Translated_438_residues MALTASTMEHDAVVLHSHGGRVDPGDIAIGVIIGRTSEFFDFFVYAIASVIVFPRLLFPEADPLTGTLYSFGLFALAFIA RPFGTALFLAVDRTWGRGAKLTIALFLLGTSTVAIAFLPARDVIGVSAVWLLASARIAQGLAWGGAWDGLAPLLAMNAPE GRRGWYAMLPQLGAPLGLIVASILFAYFAGSLSTEDFYSWGWRYPFFVAFAINVVALFARLRMAVTPEYEQLFERGDLQP APVLETVREEGSGIAVGTFAPLATFALFHMVTVFPLSWVYLFTSEGATRFLVVETIGAMVGIIAIVASGRIADKVGRRTL LGASAAAIAVFSGFAPQLLNGGIAGELTFMVLGFALLGISFGQSSGAVASRFANRYRYTASAITNDFAWLFGAGFAPLAA LLLSSHFGLVAAGAYLLSGCVCTLLALRLNKRLEMGGG >Mature_437_residues ALTASTMEHDAVVLHSHGGRVDPGDIAIGVIIGRTSEFFDFFVYAIASVIVFPRLLFPEADPLTGTLYSFGLFALAFIAR PFGTALFLAVDRTWGRGAKLTIALFLLGTSTVAIAFLPARDVIGVSAVWLLASARIAQGLAWGGAWDGLAPLLAMNAPEG RRGWYAMLPQLGAPLGLIVASILFAYFAGSLSTEDFYSWGWRYPFFVAFAINVVALFARLRMAVTPEYEQLFERGDLQPA PVLETVREEGSGIAVGTFAPLATFALFHMVTVFPLSWVYLFTSEGATRFLVVETIGAMVGIIAIVASGRIADKVGRRTLL GASAAAIAVFSGFAPQLLNGGIAGELTFMVLGFALLGISFGQSSGAVASRFANRYRYTASAITNDFAWLFGAGFAPLAAL LLSSHFGLVAAGAYLLSGCVCTLLALRLNKRLEMGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=445, Percent_Identity=34.8314606741573, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI1788292, Length=418, Percent_Identity=28.4688995215311, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1790550, Length=409, Percent_Identity=26.4058679706601, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1788942, Length=308, Percent_Identity=27.9220779220779, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46473; Mature: 46342
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTASTMEHDAVVLHSHGGRVDPGDIAIGVIIGRTSEFFDFFVYAIASVIVFPRLLFPE CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC ADPLTGTLYSFGLFALAFIARPFGTALFLAVDRTWGRGAKLTIALFLLGTSTVAIAFLPA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEHEEEHHCCEEEEEEECC RDVIGVSAVWLLASARIAQGLAWGGAWDGLAPLLAMNAPEGRRGWYAMLPQLGAPLGLIV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH ASILFAYFAGSLSTEDFYSWGWRYPFFVAFAINVVALFARLRMAVTPEYEQLFERGDLQP HHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC APVLETVREEGSGIAVGTFAPLATFALFHMVTVFPLSWVYLFTSEGATRFLVVETIGAMV CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHH GIIAIVASGRIADKVGRRTLLGASAAAIAVFSGFAPQLLNGGIAGELTFMVLGFALLGIS HHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH FGQSSGAVASRFANRYRYTASAITNDFAWLFGAGFAPLAALLLSSHFGLVAAGAYLLSGC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH VCTLLALRLNKRLEMGGG HHHHHHHHHHCCCCCCCC >Mature Secondary Structure ALTASTMEHDAVVLHSHGGRVDPGDIAIGVIIGRTSEFFDFFVYAIASVIVFPRLLFPE CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC ADPLTGTLYSFGLFALAFIARPFGTALFLAVDRTWGRGAKLTIALFLLGTSTVAIAFLPA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEHEEEHHCCEEEEEEECC RDVIGVSAVWLLASARIAQGLAWGGAWDGLAPLLAMNAPEGRRGWYAMLPQLGAPLGLIV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH ASILFAYFAGSLSTEDFYSWGWRYPFFVAFAINVVALFARLRMAVTPEYEQLFERGDLQP HHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC APVLETVREEGSGIAVGTFAPLATFALFHMVTVFPLSWVYLFTSEGATRFLVVETIGAMV CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHH GIIAIVASGRIADKVGRRTLLGASAAAIAVFSGFAPQLLNGGIAGELTFMVLGFALLGIS HHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH FGQSSGAVASRFANRYRYTASAITNDFAWLFGAGFAPLAALLLSSHFGLVAAGAYLLSGC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH VCTLLALRLNKRLEMGGG HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]