| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423574
Identifier: 158423574
GI number: 158423574
Start: 2251332
End: 2252348
Strand: Reverse
Name: 158423574
Synonym: AZC_1950
Alternate gene names: NA
Gene position: 2252348-2251332 (Counterclockwise)
Preceding gene: 158423575
Following gene: 158423573
Centisome position: 41.94
GC content: 63.13
Gene sequence:
>1017_bases ATGAGCATCCTAAAAACCTTGCGGGCGCTCGCGCTCGCCGCGGCCGCTCTCGTCGCCGCCGTCCCCGCAGCGCGGGCCGA GGTGAAGGAAGTCCGCATCTCCAAGGGCTACGGCATCCTCTATCTGCCGCTCATCGTCATGGAAGACCAGAAGCTGTTGG AGAAGCAGGCCGAGAAGGCCGGCCTCGGCCCGCTCAAGGTCACGTGGCTGATGCTCGATGGCGGCAATGTCATCAATGAC GCCATGATGGCCGGCTCGCTCGATTTTGCTGGCACCGGCGCGCCCGGCTTCATCACGCTCTGGGCCAAGGCGAAGGGCAT CCCGAACGTGGAGGTGGTGGGCATCAGCGGCCTCAGCGCCACCGCGCTGTGGATGAACACCAACAGCCCGAACATCAATT CGCTCAAGGACTTCAAGGCGGGCGACAAGATCGCCCTTCCCGGCATCAAGACCTCGCTCTCGGCCGTGGTGCTGCAGATG ATGGCGGCGCACGAATTCGGCCGCGAGAACTATGCCAAGCTCGACCCGCTCACGGTGAGCCTGCCCCACCCCGAGGCGCT CGCGGCCCTCGTCGGCGGCAAGACCGAGATCAATGCCCACTTCACTTCGCCGCCCTTCTCCTATCTGGAGCTGAAGGACC CAAAGGTGCATCGGGTGGCAAATTCCGTCGATGTCATCGGCCCCATCACGCTCGACGTGACGTTTGCGCCGAAGAAGTTC GTGGATGCCAATCCGAAGGTCACGCAGGCCTTCCTCGACGCGCTGGATGAGGCGGATGCCTTCATCGCCGCCAACAAGCA GGCAGCGGCCGAGATCTACGTGCGGAACGCCAAGGTGAAGACCTCCGTGGAGGAGATCCTTGAAATGCTGAACGACAAGG ATACGCGCTTCTCCACGACACCGGACGGCATCATGCAGTTCGCCGACTTCATGCACGCTGCCGGCTCCATCAAGGTCAAG CCGAAGGCCTGGAGCGATCTGTTCATTCCCCAGCTTGCCAGCCGCAAGGGCAGCTGA
Upstream 100 bases:
>100_bases GTGGGCGGCCGGCGTGCCGGCCGGCCGCCCGAGACAGCCAGGCACGAGCCCGATCCATATTCGCGAACAACAGCCGACAA GGCACATGGGAGGAAACCAC
Downstream 100 bases:
>100_bases CCGGCAAAGGGCACCGGAGGACCGGTGCCCTTCCCCAGTGGATCGGGCCAGCAACCGGGCTGGCCCTTACGCATCCGGCA GGGGTAGGATGGACAGGCAT
Product: substrate-binding transmembrane protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSILKTLRALALAAAALVAAVPAARAEVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKAGLGPLKVTWLMLDGGNVIND AMMAGSLDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSATALWMNTNSPNINSLKDFKAGDKIALPGIKTSLSAVVLQM MAAHEFGRENYAKLDPLTVSLPHPEALAALVGGKTEINAHFTSPPFSYLELKDPKVHRVANSVDVIGPITLDVTFAPKKF VDANPKVTQAFLDALDEADAFIAANKQAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTTPDGIMQFADFMHAAGSIKVK PKAWSDLFIPQLASRKGS
Sequences:
>Translated_338_residues MSILKTLRALALAAAALVAAVPAARAEVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKAGLGPLKVTWLMLDGGNVIND AMMAGSLDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSATALWMNTNSPNINSLKDFKAGDKIALPGIKTSLSAVVLQM MAAHEFGRENYAKLDPLTVSLPHPEALAALVGGKTEINAHFTSPPFSYLELKDPKVHRVANSVDVIGPITLDVTFAPKKF VDANPKVTQAFLDALDEADAFIAANKQAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTTPDGIMQFADFMHAAGSIKVK PKAWSDLFIPQLASRKGS >Mature_337_residues SILKTLRALALAAAALVAAVPAARAEVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKAGLGPLKVTWLMLDGGNVINDA MMAGSLDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSATALWMNTNSPNINSLKDFKAGDKIALPGIKTSLSAVVLQMM AAHEFGRENYAKLDPLTVSLPHPEALAALVGGKTEINAHFTSPPFSYLELKDPKVHRVANSVDVIGPITLDVTFAPKKFV DANPKVTQAFLDALDEADAFIAANKQAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTTPDGIMQFADFMHAAGSIKVKP KAWSDLFIPQLASRKGS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36125; Mature: 35994
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKTLRALALAAAALVAAVPAARAEVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHC GLGPLKVTWLMLDGGNVINDAMMAGSLDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSA CCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCE TALWMNTNSPNINSLKDFKAGDKIALPGIKTSLSAVVLQMMAAHEFGRENYAKLDPLTVS EEEEEECCCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE LPHPEALAALVGGKTEINAHFTSPPFSYLELKDPKVHRVANSVDVIGPITLDVTFAPKKF CCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCCHHHHHHCCCCEEEEEEEEEEECCHHH VDANPKVTQAFLDALDEADAFIAANKQAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTT CCCCCHHHHHHHHHHHHCCCEEECCCHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCC PDGIMQFADFMHAAGSIKVKPKAWSDLFIPQLASRKGS HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SILKTLRALALAAAALVAAVPAARAEVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHC GLGPLKVTWLMLDGGNVINDAMMAGSLDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSA CCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCE TALWMNTNSPNINSLKDFKAGDKIALPGIKTSLSAVVLQMMAAHEFGRENYAKLDPLTVS EEEEEECCCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE LPHPEALAALVGGKTEINAHFTSPPFSYLELKDPKVHRVANSVDVIGPITLDVTFAPKKF CCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCCHHHHHHCCCCEEEEEEEEEEECCHHH VDANPKVTQAFLDALDEADAFIAANKQAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTT CCCCCHHHHHHHHHHHHCCCEEECCCHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCC PDGIMQFADFMHAAGSIKVKPKAWSDLFIPQLASRKGS HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA