| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fhuA [H]
Identifier: 158423537
GI number: 158423537
Start: 2193191
End: 2195410
Strand: Reverse
Name: fhuA [H]
Synonym: AZC_1913
Alternate gene names: 158423537
Gene position: 2195410-2193191 (Counterclockwise)
Preceding gene: 158423538
Following gene: 158423536
Centisome position: 40.88
GC content: 64.82
Gene sequence:
>2220_bases ATGCTTCGCCCTTTCACGCCGCGCGTTTCGCGCGCCGGCATCGCTTTGCTTCTTGCCGGAACCGTCGCTCCCCCCGCCTT CGCCCAGCAGGCCGCGCCATCGCCGACCCAGAGCGCCGTCGAGCTGCCGACGGTTTCCGTCCAGGCCGTCTCACCGGCGG AGGAACTGGTGCTGCCGGACATCGCCCGGCTCAACCTCAAGAACGAGACGGGCACGCTGGTCGGCCTGACACCGTTCGAG ACGCCGGCCGCCATCGACATCGTGACCCAGCAGCAGATGCAGGATCGCGGGCTGCGCACGCTCACGGAGGTCTATAATTC GGTGCCCGGCGTCATGTCCGGCAATCTGCCCGGCGAGCCCGGCGTCACGTCCATCCGCGGTTTTTCACGCGGCGCGGTCG GCTACATGCTGGACGGCATGCAGGTGCCCGATCCGCTGATGGTCTCGCGCAATTACGACAGCTTCAGCTTCGACCGGGTC GAGGTGCTCAAGGGCCCGGCTTCGGTGATCTCCGGCAATGGCGCGCTGGCCGGCACCATCAATCTTGTCACCAAGCAGCC CATCCTCGGCCAGAACACCGGGCAGGCGCTCCTGAGCTACGGCAGCTTCGATACGCTGCGGGTGGGCGGCGACTACAATG TCGCCCTCGGCCAGAACGCCGCCGTGCGCGCCAGCGCGCTCTACAGCCAGTCCAACGGCTATATCACCGACACCGGATCC GAGACGGCCGCCATCACGCTCGGCGCCACCGTCGCCCTGTCGGACCGGCTCACCACCACCACGTCGGTCGATTATTTCCA CGACGACTACCAGACGCCCTATCAGGGCACGCCGCTCATCGCCCGCTCCGCGGCGCTCTCTCCGTCCAGCGTGGTCTCCG CGCCCGGCGGCATGGTCATCGACCGGGCATTGTGGAACCGCAACTACAACGTCCTCAACGGCGAGATGAAATCCGATGCG GTGTGGGCCCGCAACCGCACGGAATACGAACTGACCGACACCTGGACGCTGCGGAACGACCTCAATTATTACACCGCCGA CCGGCGCTGGGCCAATTCCGAGGACTTCACCTACAACCCGGCCACCCGGTTGCTCGACCGCACCACCACCCTCATCACCC ACGACCAGCAGGTGTGGTCCGATCAGCTCAGCGCCCGATATGATGGGATGATCGCCAACATGCGCCACCGCTTCGCGATC GGCGCGGACTACATCCACACGAACTTCGATTCCGAGCGGCGCTTCGGCACCACCACGCCCGTCAATCCCTACTTCCCCAA CCGGGGCTATTTCCCGGTCGATACATCCGCCAATTTCTCCACCCGGCAGAATTACGACAGCCAGGTGGATCAGGCGGCTG TCTTCGCCGAGGATGCCATTAACATCACCTCCAACTGGCTGGTGGTGGGCGGTATCCGCTACGAGGCGATCCAGCTCGAC CGGCAGATCTACAATCTCAATACGCTGTCGACCTCCAGCTTCGGCAACAATTACGAAAGCGTGACCTGGCGGCTCGGCAC CGTCTACAACATCACGCCCGGCACGGCGCTGTTCGCGCAGTACAATCAGGCCACCGTCCCGGTCACGACGCTGCTGCTGA GCAACCTGGCCAATGCCAGCTTCGAGCTCTCGACCGGCAATTCCATCGAGGCGGGCATCAAGTCGACCTTCTGGGACAAC CGGGCGGTGGCGACGGCCTCGGTCTACCAGATCGAGCAATACAACATCCTGACCCGCGACCCCGCCAATCCGTCGCTGAC CGTCCAGGGCGGCAGCATGCGTTCGCGCGGCGCCGAGGCGGAACTGGCTGTGGCCATCACAGACCAGCTCAAGCTCACGG CGAATGCGTCCTACATCAATGCCGAATTCACGCAGCTCTGGTCGGCAGGCTCCAATCTCGCCGGCAACCGGCCGCCCAAC GTGCCCGAATGGACCTACTTCCTGATGGCGGACTACAAGCTGCCGACGCTGCCGATGACGCTGAGCGCATCGGTGCAGTA CGTCAGTTCCTTCTACACGGACAATGCCAACACCATCGAGGTGGCGGGTCACACCGTGCTGGATGCCTGGGCGAGCTATG AGATCGGCCGCGGCACCCTGCGGCTGCGCGGGCGCAACCTGACCAACGCCTTCTATGCGGACTGGTCCGGCTACAGCTCC AGCCAGGTCTTCCTGGGCGCGCCCCGAAGCGTCGAGCTGTCCTACGCCGCCAAGTTCTGA
Upstream 100 bases:
>100_bases GTCTCTGGTTCGCGAGCGATCCTGCACGCCCATCCGGGCCGCGGACCGCCGTCCGAGCGCGCGGCCGCTCGCCGTCCCCG CACATCAAGGTGGAAACCCC
Downstream 100 bases:
>100_bases GCCTCGTATCCCCGGCGGGCGGAGCCACGGCTTCCGCCCGCCCCTTCTGTCCCAATGCGGGAGATGAGCCGTGCGCGACG CTGTCTGGTCCGCCACCGCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MLRPFTPRVSRAGIALLLAGTVAPPAFAQQAAPSPTQSAVELPTVSVQAVSPAEELVLPDIARLNLKNETGTLVGLTPFE TPAAIDIVTQQQMQDRGLRTLTEVYNSVPGVMSGNLPGEPGVTSIRGFSRGAVGYMLDGMQVPDPLMVSRNYDSFSFDRV EVLKGPASVISGNGALAGTINLVTKQPILGQNTGQALLSYGSFDTLRVGGDYNVALGQNAAVRASALYSQSNGYITDTGS ETAAITLGATVALSDRLTTTTSVDYFHDDYQTPYQGTPLIARSAALSPSSVVSAPGGMVIDRALWNRNYNVLNGEMKSDA VWARNRTEYELTDTWTLRNDLNYYTADRRWANSEDFTYNPATRLLDRTTTLITHDQQVWSDQLSARYDGMIANMRHRFAI GADYIHTNFDSERRFGTTTPVNPYFPNRGYFPVDTSANFSTRQNYDSQVDQAAVFAEDAINITSNWLVVGGIRYEAIQLD RQIYNLNTLSTSSFGNNYESVTWRLGTVYNITPGTALFAQYNQATVPVTTLLLSNLANASFELSTGNSIEAGIKSTFWDN RAVATASVYQIEQYNILTRDPANPSLTVQGGSMRSRGAEAELAVAITDQLKLTANASYINAEFTQLWSAGSNLAGNRPPN VPEWTYFLMADYKLPTLPMTLSASVQYVSSFYTDNANTIEVAGHTVLDAWASYEIGRGTLRLRGRNLTNAFYADWSGYSS SQVFLGAPRSVELSYAAKF
Sequences:
>Translated_739_residues MLRPFTPRVSRAGIALLLAGTVAPPAFAQQAAPSPTQSAVELPTVSVQAVSPAEELVLPDIARLNLKNETGTLVGLTPFE TPAAIDIVTQQQMQDRGLRTLTEVYNSVPGVMSGNLPGEPGVTSIRGFSRGAVGYMLDGMQVPDPLMVSRNYDSFSFDRV EVLKGPASVISGNGALAGTINLVTKQPILGQNTGQALLSYGSFDTLRVGGDYNVALGQNAAVRASALYSQSNGYITDTGS ETAAITLGATVALSDRLTTTTSVDYFHDDYQTPYQGTPLIARSAALSPSSVVSAPGGMVIDRALWNRNYNVLNGEMKSDA VWARNRTEYELTDTWTLRNDLNYYTADRRWANSEDFTYNPATRLLDRTTTLITHDQQVWSDQLSARYDGMIANMRHRFAI GADYIHTNFDSERRFGTTTPVNPYFPNRGYFPVDTSANFSTRQNYDSQVDQAAVFAEDAINITSNWLVVGGIRYEAIQLD RQIYNLNTLSTSSFGNNYESVTWRLGTVYNITPGTALFAQYNQATVPVTTLLLSNLANASFELSTGNSIEAGIKSTFWDN RAVATASVYQIEQYNILTRDPANPSLTVQGGSMRSRGAEAELAVAITDQLKLTANASYINAEFTQLWSAGSNLAGNRPPN VPEWTYFLMADYKLPTLPMTLSASVQYVSSFYTDNANTIEVAGHTVLDAWASYEIGRGTLRLRGRNLTNAFYADWSGYSS SQVFLGAPRSVELSYAAKF >Mature_739_residues MLRPFTPRVSRAGIALLLAGTVAPPAFAQQAAPSPTQSAVELPTVSVQAVSPAEELVLPDIARLNLKNETGTLVGLTPFE TPAAIDIVTQQQMQDRGLRTLTEVYNSVPGVMSGNLPGEPGVTSIRGFSRGAVGYMLDGMQVPDPLMVSRNYDSFSFDRV EVLKGPASVISGNGALAGTINLVTKQPILGQNTGQALLSYGSFDTLRVGGDYNVALGQNAAVRASALYSQSNGYITDTGS ETAAITLGATVALSDRLTTTTSVDYFHDDYQTPYQGTPLIARSAALSPSSVVSAPGGMVIDRALWNRNYNVLNGEMKSDA VWARNRTEYELTDTWTLRNDLNYYTADRRWANSEDFTYNPATRLLDRTTTLITHDQQVWSDQLSARYDGMIANMRHRFAI GADYIHTNFDSERRFGTTTPVNPYFPNRGYFPVDTSANFSTRQNYDSQVDQAAVFAEDAINITSNWLVVGGIRYEAIQLD RQIYNLNTLSTSSFGNNYESVTWRLGTVYNITPGTALFAQYNQATVPVTTLLLSNLANASFELSTGNSIEAGIKSTFWDN RAVATASVYQIEQYNILTRDPANPSLTVQGGSMRSRGAEAELAVAITDQLKLTANASYINAEFTQLWSAGSNLAGNRPPN VPEWTYFLMADYKLPTLPMTLSASVQYVSSFYTDNANTIEVAGHTVLDAWASYEIGRGTLRLRGRNLTNAFYADWSGYSS SQVFLGAPRSVELSYAAKF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=777, Percent_Identity=23.1660231660232, Blast_Score=142, Evalue=8e-35, Organism=Escherichia coli, GI1787344, Length=757, Percent_Identity=22.5891677675033, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1787024, Length=733, Percent_Identity=22.5102319236016, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788478, Length=119, Percent_Identity=32.7731092436975, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80564; Mature: 80564
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPFTPRVSRAGIALLLAGTVAPPAFAQQAAPSPTQSAVELPTVSVQAVSPAEELVLPD CCCCCCCCHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCEECCCEEEEECCCHHHHCCCC IARLNLKNETGTLVGLTPFETPAAIDIVTQQQMQDRGLRTLTEVYNSVPGVMSGNLPGEP HHEEEECCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC GVTSIRGFSRGAVGYMLDGMQVPDPLMVSRNYDSFSFDRVEVLKGPASVISGNGALAGTI CCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHEECCCCHHHCCCCCCEEEEE NLVTKQPILGQNTGQALLSYGSFDTLRVGGDYNVALGQNAAVRASALYSQSNGYITDTGS EEEECCCCCCCCCCHHHHCCCCCCEEEECCCEEEEECCCCEEEEEEEEECCCCEEEECCC ETAAITLGATVALSDRLTTTTSVDYFHDDYQTPYQGTPLIARSAALSPSSVVSAPGGMVI CEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCEEE DRALWNRNYNVLNGEMKSDAVWARNRTEYELTDTWTLRNDLNYYTADRRWANSEDFTYNP EHHHHCCCCEEECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCEECH ATRLLDRTTTLITHDQQVWSDQLSARYDGMIANMRHRFAIGADYIHTNFDSERRFGTTTP HHHHHHHHHEEEECCHHHHHHHHHHHHCCHHHHCHHEEEECCCEEECCCCCCCCCCCCCC VNPYFPNRGYFPVDTSANFSTRQNYDSQVDQAAVFAEDAINITSNWLVVGGIRYEAIQLD CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCEEEEECCEEEEEEEC RQIYNLNTLSTSSFGNNYESVTWRLGTVYNITPGTALFAQYNQATVPVTTLLLSNLANAS HHEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCE FELSTGNSIEAGIKSTFWDNRAVATASVYQIEQYNILTRDPANPSLTVQGGSMRSRGAEA EEECCCCCCCCCCHHHCCCCCEEEEEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCC ELAVAITDQLKLTANASYINAEFTQLWSAGSNLAGNRPPNVPEWTYFLMADYKLPTLPMT EEEEEEECCEEEEECCEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEE LSASVQYVSSFYTDNANTIEVAGHTVLDAWASYEIGRGTLRLRGRNLTNAFYADWSGYSS HHHHHHHHHHHHCCCCCEEEECCCEEEHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCC SQVFLGAPRSVELSYAAKF CEEEEECCCCEEEEEEECC >Mature Secondary Structure MLRPFTPRVSRAGIALLLAGTVAPPAFAQQAAPSPTQSAVELPTVSVQAVSPAEELVLPD CCCCCCCCHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCEECCCEEEEECCCHHHHCCCC IARLNLKNETGTLVGLTPFETPAAIDIVTQQQMQDRGLRTLTEVYNSVPGVMSGNLPGEP HHEEEECCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC GVTSIRGFSRGAVGYMLDGMQVPDPLMVSRNYDSFSFDRVEVLKGPASVISGNGALAGTI CCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHEECCCCHHHCCCCCCEEEEE NLVTKQPILGQNTGQALLSYGSFDTLRVGGDYNVALGQNAAVRASALYSQSNGYITDTGS EEEECCCCCCCCCCHHHHCCCCCCEEEECCCEEEEECCCCEEEEEEEEECCCCEEEECCC ETAAITLGATVALSDRLTTTTSVDYFHDDYQTPYQGTPLIARSAALSPSSVVSAPGGMVI CEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCEEE DRALWNRNYNVLNGEMKSDAVWARNRTEYELTDTWTLRNDLNYYTADRRWANSEDFTYNP EHHHHCCCCEEECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCEECH ATRLLDRTTTLITHDQQVWSDQLSARYDGMIANMRHRFAIGADYIHTNFDSERRFGTTTP HHHHHHHHHEEEECCHHHHHHHHHHHHCCHHHHCHHEEEECCCEEECCCCCCCCCCCCCC VNPYFPNRGYFPVDTSANFSTRQNYDSQVDQAAVFAEDAINITSNWLVVGGIRYEAIQLD CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCEEEEECCEEEEEEEC RQIYNLNTLSTSSFGNNYESVTWRLGTVYNITPGTALFAQYNQATVPVTTLLLSNLANAS HHEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCE FELSTGNSIEAGIKSTFWDNRAVATASVYQIEQYNILTRDPANPSLTVQGGSMRSRGAEA EEECCCCCCCCCCHHHCCCCCEEEEEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCC ELAVAITDQLKLTANASYINAEFTQLWSAGSNLAGNRPPNVPEWTYFLMADYKLPTLPMT EEEEEEECCEEEEECCEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEE LSASVQYVSSFYTDNANTIEVAGHTVLDAWASYEIGRGTLRLRGRNLTNAFYADWSGYSS HHHHHHHHHHHHCCCCCEEEECCCEEEHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCC SQVFLGAPRSVELSYAAKF CEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]