| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423536
Identifier: 158423536
GI number: 158423536
Start: 2191723
End: 2193120
Strand: Reverse
Name: 158423536
Synonym: AZC_1912
Alternate gene names: NA
Gene position: 2193120-2191723 (Counterclockwise)
Preceding gene: 158423537
Following gene: 158423534
Centisome position: 40.84
GC content: 68.03
Gene sequence:
>1398_bases GTGCGCGACGCTGTCTGGTCCGCCACCGCTTTCTATCGTGCTGTCTGGCGCTGGCATTTCTATGCCGGTCTCGTCTGCGC GCCGTTTCTGGTCATCCTTGCAGTGACCGGCGCCATCTACCTGTTCAACGACGAGATCAACGACCTCGTCTATCCCAACC TGCGGCTCGTGCCCGCCAGCGCCACTGAGATTCCTCTGAGCGAGATCGCGCGCGCTGCCGCCGCGTCCGTACCGGGCGGC ACCGTCACGCGCATCGACACGCCTACCGCCGCGGGCCGCAGCGTGCAGGTATTCGTCGCGCCGCCCAGTGGAGCACCCCT GCGCGTCTTCGTCGATCCCGGCAGCGGCAAGGTGCTGGGATCGTATGTCTATACGCATACGCTGGTGGGTTTTGCGGATG TGGCCCACGGCTCGCTGATGCTGGGGCCGCTGGGTGATGCGGTGGTGGAACTGGCCGCCTGCTGGGGATTCATCCTCACG GTCACCGGCCTCTTCCTGTGGTGGCCGCGCGGGGGAAAGCCGCCGCTGTTCCGGCCCCGCTCCGGCCTGCGCAAGCGGGC ATTCTGGAAGGACTGGCACAGCGCGGTGGGCTTCTGGAGCGCCCTGCTTGTGCTCTTCCTCATCCTCACCGGGCTGCCCT GGGCGGGCATCTGGGGCGATCTCCTGCGGGCCGGCGCCGATGTCGCCGGCATCGGTTACCCCGCCACCTTCCGCACCCAT GGTGCCACCCTCCAGTCACACCTGACGATCAAGGAGGCGAGCGACGGCGCCGCCCCCTGGACGCTGGAGAATGAGCCCGC CCCGTCATCGCAGGCCGCGGACCCGCACGCACATCATCATGGCACAGCGCCCGCGCCGCGCGCCGCCGGCACGCCACAGC CCATCGGCCTCGATGCCGCGGCTCAAGTGATCGCGGATGCCGGCATGTCCGCCCCCTACCGGCTGAGCCTGCCGCGCGAT GCGCTCGGCACCTATATCGCCTTCGTCTATCCGGACCAGCCGGAAGGCCAGCGCACCCTTTATATCGACCAGTACTCCGG CCAGGTGCTGGGTGACATCGGCTTCGGGGACTACGGGCCTATGGCGAAGGCGGTGGAACTCGGCGTGCAGTTGCATATGG GCAATTATTTCGGCCTGCCCAACCAGCTCGTGATGCTGCTGCCCTGCCTCGCCATCGTCTTCCTCTGCATCTCCGGCCCG ATCATGTGGTGGCGCCGCCGTCCAGCGGGGCGCCTCGGAGCGCCCAAGCCCATCGCCCGTCCGACGCTCCGTGTGCTGGC GCTGATCGTTCTCGCGCTGTGCCTTGTCTTCCCGCTTGCCGGAGTATCGCTCATCGCGGTCCTCGGGCTCGACCTCCTGG CGGGGCGTATTGCGGAAGGATTGGGACCGGTGGCCTGA
Upstream 100 bases:
>100_bases GTCGAGCTGTCCTACGCCGCCAAGTTCTGAGCCTCGTATCCCCGGCGGGCGGAGCCACGGCTTCCGCCCGCCCCTTCTGT CCCAATGCGGGAGATGAGCC
Downstream 100 bases:
>100_bases TGGACCGACCCGCTCAATCCCCGTCCGCCAGGCCGGTGCTCCGCTCGCGCAGGGAGGCAATTTGCAGGCGTCGCATGCGG CGGTGGATCGTGGTGCGGTC
Product: PepSY amd peptidase M4 protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Peptidase; Sulfite Reductase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; PepSY-Associated TM Helix Containing Protein; Iron-Uptake Factor; Transmembrane Protein; Flavodoxin/Nitric Oxide Synthase; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Sulfite Reductase Flavoprotein Alpha-Component; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Transporter-Like Membrane Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter; Sulfite Reductase/Membrane Protein; Iron-Regulated Transmembrane Protein; Sulfite Reductase Flavoprotein Component
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MRDAVWSATAFYRAVWRWHFYAGLVCAPFLVILAVTGAIYLFNDEINDLVYPNLRLVPASATEIPLSEIARAAAASVPGG TVTRIDTPTAAGRSVQVFVAPPSGAPLRVFVDPGSGKVLGSYVYTHTLVGFADVAHGSLMLGPLGDAVVELAACWGFILT VTGLFLWWPRGGKPPLFRPRSGLRKRAFWKDWHSAVGFWSALLVLFLILTGLPWAGIWGDLLRAGADVAGIGYPATFRTH GATLQSHLTIKEASDGAAPWTLENEPAPSSQAADPHAHHHGTAPAPRAAGTPQPIGLDAAAQVIADAGMSAPYRLSLPRD ALGTYIAFVYPDQPEGQRTLYIDQYSGQVLGDIGFGDYGPMAKAVELGVQLHMGNYFGLPNQLVMLLPCLAIVFLCISGP IMWWRRRPAGRLGAPKPIARPTLRVLALIVLALCLVFPLAGVSLIAVLGLDLLAGRIAEGLGPVA
Sequences:
>Translated_465_residues MRDAVWSATAFYRAVWRWHFYAGLVCAPFLVILAVTGAIYLFNDEINDLVYPNLRLVPASATEIPLSEIARAAAASVPGG TVTRIDTPTAAGRSVQVFVAPPSGAPLRVFVDPGSGKVLGSYVYTHTLVGFADVAHGSLMLGPLGDAVVELAACWGFILT VTGLFLWWPRGGKPPLFRPRSGLRKRAFWKDWHSAVGFWSALLVLFLILTGLPWAGIWGDLLRAGADVAGIGYPATFRTH GATLQSHLTIKEASDGAAPWTLENEPAPSSQAADPHAHHHGTAPAPRAAGTPQPIGLDAAAQVIADAGMSAPYRLSLPRD ALGTYIAFVYPDQPEGQRTLYIDQYSGQVLGDIGFGDYGPMAKAVELGVQLHMGNYFGLPNQLVMLLPCLAIVFLCISGP IMWWRRRPAGRLGAPKPIARPTLRVLALIVLALCLVFPLAGVSLIAVLGLDLLAGRIAEGLGPVA >Mature_465_residues MRDAVWSATAFYRAVWRWHFYAGLVCAPFLVILAVTGAIYLFNDEINDLVYPNLRLVPASATEIPLSEIARAAAASVPGG TVTRIDTPTAAGRSVQVFVAPPSGAPLRVFVDPGSGKVLGSYVYTHTLVGFADVAHGSLMLGPLGDAVVELAACWGFILT VTGLFLWWPRGGKPPLFRPRSGLRKRAFWKDWHSAVGFWSALLVLFLILTGLPWAGIWGDLLRAGADVAGIGYPATFRTH GATLQSHLTIKEASDGAAPWTLENEPAPSSQAADPHAHHHGTAPAPRAAGTPQPIGLDAAAQVIADAGMSAPYRLSLPRD ALGTYIAFVYPDQPEGQRTLYIDQYSGQVLGDIGFGDYGPMAKAVELGVQLHMGNYFGLPNQLVMLLPCLAIVFLCISGP IMWWRRRPAGRLGAPKPIARPTLRVLALIVLALCLVFPLAGVSLIAVLGLDLLAGRIAEGLGPVA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49497; Mature: 49497
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAVWSATAFYRAVWRWHFYAGLVCAPFLVILAVTGAIYLFNDEINDLVYPNLRLVPAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHCCCCEEEEECC ATEIPLSEIARAAAASVPGGTVTRIDTPTAAGRSVQVFVAPPSGAPLRVFVDPGSGKVLG CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEH SYVYTHTLVGFADVAHGSLMLGPLGDAVVELAACWGFILTVTGLFLWWPRGGKPPLFRPR HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC SGLRKRAFWKDWHSAVGFWSALLVLFLILTGLPWAGIWGDLLRAGADVAGIGYPATFRTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEECCC GATLQSHLTIKEASDGAAPWTLENEPAPSSQAADPHAHHHGTAPAPRAAGTPQPIGLDAA CCCHHHEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AQVIADAGMSAPYRLSLPRDALGTYIAFVYPDQPEGQRTLYIDQYSGQVLGDIGFGDYGP HHHHHHCCCCCCEEECCCHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCH MAKAVELGVQLHMGNYFGLPNQLVMLLPCLAIVFLCISGPIMWWRRRPAGRLGAPKPIAR HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCH PTLRVLALIVLALCLVFPLAGVSLIAVLGLDLLAGRIAEGLGPVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRDAVWSATAFYRAVWRWHFYAGLVCAPFLVILAVTGAIYLFNDEINDLVYPNLRLVPAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHCCCCEEEEECC ATEIPLSEIARAAAASVPGGTVTRIDTPTAAGRSVQVFVAPPSGAPLRVFVDPGSGKVLG CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEH SYVYTHTLVGFADVAHGSLMLGPLGDAVVELAACWGFILTVTGLFLWWPRGGKPPLFRPR HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC SGLRKRAFWKDWHSAVGFWSALLVLFLILTGLPWAGIWGDLLRAGADVAGIGYPATFRTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEECCC GATLQSHLTIKEASDGAAPWTLENEPAPSSQAADPHAHHHGTAPAPRAAGTPQPIGLDAA CCCHHHEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AQVIADAGMSAPYRLSLPRDALGTYIAFVYPDQPEGQRTLYIDQYSGQVLGDIGFGDYGP HHHHHHCCCCCCEEECCCHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCH MAKAVELGVQLHMGNYFGLPNQLVMLLPCLAIVFLCISGPIMWWRRRPAGRLGAPKPIAR HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCH PTLRVLALIVLALCLVFPLAGVSLIAVLGLDLLAGRIAEGLGPVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA