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The map label for this gene is bphR [H]

Identifier: 158423503

GI number: 158423503

Start: 2153199

End: 2153909

Strand: Reverse

Name: bphR [H]

Synonym: AZC_1879

Alternate gene names: 158423503

Gene position: 2153909-2153199 (Counterclockwise)

Preceding gene: 158423516

Following gene: 158423497

Centisome position: 40.11

GC content: 62.87

Gene sequence:

>711_bases
ATGAGCGACATGCAGAAGACCGGCAAGGAAACGCGGGCCGGCGACGTCCTCCAGAGGATGCGCAGCGACATCATCAATTG
CGAGCTGAAGCCCGGCGAGAAGCTGCGCTTTGAGGCATTGCGGGCGCGCTATGACGTCAGCTTCTCAACCCTGCGCGAGG
CCCTGTCGCGATTGACCGCCGACAACCTCGTGGTGGCGGAAGGCCAGCGCGGCTTCATGGTGGCGCCCGTCTCCATCGCC
GACCTGAACGATCTCACCGAAACGCGCGTTCTGATTGAAATCGAGATGCTGCGCCGCTCCATGCGCAATGGCGACGATGC
GTGGGAAGCAGAAATCCTGTCCACTTTCCACCGGATGGACCGGATGCAGGCGCGCCTCGGGCGGGAATATTATCTCTCCG
AGGACTGGACCAAGGTGCATGGGGCTTTCCATGCCTCGCTGGTGGCCGCCTGCAACTCGCCGACGCTCGTGGAAATCCGC
AACAAGCTGTTCGAGCGCGCCCATCGCTATCGCCGCATCTCTTCCCAGTTCCGCACGAAGTGGCGCAAGAAGGATGTTGA
GCATAAGATGATTGCCGACGCCGCGCTCGCGCGGGATGAGGAAAGGGCGCTCTCCCTCATTGCCCGGCACATTCGAGAGA
CCAGCGAGAATGTCATTGCCCACGGCGGCCATCTGTTCGCCGCCGGCGCCCCTGGAGAGGCGGCCGAATAG

Upstream 100 bases:

>100_bases
CGGAGACGCGCGAGATTGATTTTTTTCGAAAATCGGCTAACCTCAAGTCAGAAGAAACGGTCGAGGGCCTCAGCCTGCGG
CGGCGGGAACCGAGGCGGAC

Downstream 100 bases:

>100_bases
ATCGCGGGCGGCGCACCCCATATGCCTCATAGACGGCCCGAACCGTTCTTCGCCGCGGCATCCGGGTTACAGCAAAGACC
AAGAGTGGCCTCTCACCACA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSDMQKTGKETRAGDVLQRMRSDIINCELKPGEKLRFEALRARYDVSFSTLREALSRLTADNLVVAEGQRGFMVAPVSIA
DLNDLTETRVLIEIEMLRRSMRNGDDAWEAEILSTFHRMDRMQARLGREYYLSEDWTKVHGAFHASLVAACNSPTLVEIR
NKLFERAHRYRRISSQFRTKWRKKDVEHKMIADAALARDEERALSLIARHIRETSENVIAHGGHLFAAGAPGEAAE

Sequences:

>Translated_236_residues
MSDMQKTGKETRAGDVLQRMRSDIINCELKPGEKLRFEALRARYDVSFSTLREALSRLTADNLVVAEGQRGFMVAPVSIA
DLNDLTETRVLIEIEMLRRSMRNGDDAWEAEILSTFHRMDRMQARLGREYYLSEDWTKVHGAFHASLVAACNSPTLVEIR
NKLFERAHRYRRISSQFRTKWRKKDVEHKMIADAALARDEERALSLIARHIRETSENVIAHGGHLFAAGAPGEAAE
>Mature_235_residues
SDMQKTGKETRAGDVLQRMRSDIINCELKPGEKLRFEALRARYDVSFSTLREALSRLTADNLVVAEGQRGFMVAPVSIAD
LNDLTETRVLIEIEMLRRSMRNGDDAWEAEILSTFHRMDRMQARLGREYYLSEDWTKVHGAFHASLVAACNSPTLVEIRN
KLFERAHRYRRISSQFRTKWRKKDVEHKMIADAALARDEERALSLIARHIRETSENVIAHGGHLFAAGAPGEAAE

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=203, Percent_Identity=34.9753694581281, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26956; Mature: 26825

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMQKTGKETRAGDVLQRMRSDIINCELKPGEKLRFEALRARYDVSFSTLREALSRLTA
CCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
DNLVVAEGQRGFMVAPVSIADLNDLTETRVLIEIEMLRRSMRNGDDAWEAEILSTFHRMD
CCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RMQARLGREYYLSEDWTKVHGAFHASLVAACNSPTLVEIRNKLFERAHRYRRISSQFRTK
HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WRKKDVEHKMIADAALARDEERALSLIARHIRETSENVIAHGGHLFAAGAPGEAAE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SDMQKTGKETRAGDVLQRMRSDIINCELKPGEKLRFEALRARYDVSFSTLREALSRLTA
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
DNLVVAEGQRGFMVAPVSIADLNDLTETRVLIEIEMLRRSMRNGDDAWEAEILSTFHRMD
CCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RMQARLGREYYLSEDWTKVHGAFHASLVAACNSPTLVEIRNKLFERAHRYRRISSQFRTK
HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WRKKDVEHKMIADAALARDEERALSLIARHIRETSENVIAHGGHLFAAGAPGEAAE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]