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The map label for this gene is rhmA [H]

Identifier: 158423422

GI number: 158423422

Start: 2059416

End: 2060234

Strand: Reverse

Name: rhmA [H]

Synonym: AZC_1798

Alternate gene names: 158423422

Gene position: 2060234-2059416 (Counterclockwise)

Preceding gene: 158423423

Following gene: 158423421

Centisome position: 38.37

GC content: 68.74

Gene sequence:

>819_bases
TTGCCAGACCCGTCCGCCCCAACCTGCGCCCTGCGCGGGAACGGGGGAACTCACCCTTTCGCCCGGAGATCGCTCATGTC
CCAGTCGCTCGCCCAGTTCGCCTTCTGGCTCTCCTCGCCCTCTTTCCCGCACATCGAGATTGCGCGGGGCGCGGGCTTCA
CGGCGGTGGTGCTCGACATCGAGCACGGCACCTTCAATCTCGATGACCTCGACCGGGTGATCCCCTTCTGCCGGGCGCTC
GGCATCAAGGTCTATGCCAAGGTGCTCGGCCCGCTCACCGAGCCGATCCAGCAGGCGCTCGATTTCGGGGCGGACGCCAT
CATCATCCCGCACATCGGCGCGCTCGATCATGCGAAGGCCGTGACGGCGGCCACCAAATATCCCCCGCTTGGCGTGCGCT
CCTATGCGGGTGGCCGCACCATGGGCTACGGCCCGGTGGACGACAGCTTCAGCGCCAATGAGAACGCCCGCACCAAGTGC
TGGCCGATGATCGAGAGCCGCGAAGCCCTCAATGACGTGGAGGCCATCGCCGCTCTGCCCACCGTGGACGGCCTCTTCGC
CGGCCCCACCGACCTGTCCATGGCCGCCGGCAACCCGCGCTACAGCTTCAGCGAAAGCGACAAGAACGACATCGCCCGCA
TCGGCGCCGCCGCCCGCGCCGCTGGCAAGCCCTGGGTGCTGCCCGCCTGGACGGCGCCCGAGCGCGCCTTCGGCAAGCTG
CACCGCGCCGACATCACGGTTGTGGGCGCGCAATACGCCCTCATCCGCTCCGCCTTCCACGGCCTCGTGGACAGCCTCGG
CTCCGAAGGCCTCCTGTGA

Upstream 100 bases:

>100_bases
GTGGACCGCACCGCCGGACTTGCGAAGACCTTTGTGAAGTGACCGGACGGGCCTTGCGCCCGCCCGGCCCCAAGTTCGCG
GGATCCGCCCGCACCTGACC

Downstream 100 bases:

>100_bases
TCCTCATCCGGAACGTGTCATGACCTCCCAGGCCCCCATCCGCATCGCCGTCGACATCGGCGGCACCTTCACCGACATCG
AGATTCTCGACGCCTCGACG

Product: aldolase

Products: NA

Alternate protein names: KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPDPSAPTCALRGNGGTHPFARRSLMSQSLAQFAFWLSSPSFPHIEIARGAGFTAVVLDIEHGTFNLDDLDRVIPFCRAL
GIKVYAKVLGPLTEPIQQALDFGADAIIIPHIGALDHAKAVTAATKYPPLGVRSYAGGRTMGYGPVDDSFSANENARTKC
WPMIESREALNDVEAIAALPTVDGLFAGPTDLSMAAGNPRYSFSESDKNDIARIGAAARAAGKPWVLPAWTAPERAFGKL
HRADITVVGAQYALIRSAFHGLVDSLGSEGLL

Sequences:

>Translated_272_residues
MPDPSAPTCALRGNGGTHPFARRSLMSQSLAQFAFWLSSPSFPHIEIARGAGFTAVVLDIEHGTFNLDDLDRVIPFCRAL
GIKVYAKVLGPLTEPIQQALDFGADAIIIPHIGALDHAKAVTAATKYPPLGVRSYAGGRTMGYGPVDDSFSANENARTKC
WPMIESREALNDVEAIAALPTVDGLFAGPTDLSMAAGNPRYSFSESDKNDIARIGAAARAAGKPWVLPAWTAPERAFGKL
HRADITVVGAQYALIRSAFHGLVDSLGSEGLL
>Mature_271_residues
PDPSAPTCALRGNGGTHPFARRSLMSQSLAQFAFWLSSPSFPHIEIARGAGFTAVVLDIEHGTFNLDDLDRVIPFCRALG
IKVYAKVLGPLTEPIQQALDFGADAIIIPHIGALDHAKAVTAATKYPPLGVRSYAGGRTMGYGPVDDSFSANENARTKCW
PMIESREALNDVEAIAALPTVDGLFAGPTDLSMAAGNPRYSFSESDKNDIARIGAAARAAGKPWVLPAWTAPERAFGKLH
RADITVVGAQYALIRSAFHGLVDSLGSEGLL

Specific function: Catalyzes the reversible retro-aldol cleavage of 2-keto- 3-deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde [H]

COG id: COG3836

COG function: function code G; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788578, Length=254, Percent_Identity=29.5275590551181, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789514, Length=260, Percent_Identity=30.7692307692308, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: NA

Molecular weight: Translated: 28871; Mature: 28740

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPSAPTCALRGNGGTHPFARRSLMSQSLAQFAFWLSSPSFPHIEIARGAGFTAVVLDI
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEE
EHGTFNLDDLDRVIPFCRALGIKVYAKVLGPLTEPIQQALDFGADAIIIPHIGALDHAKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
VTAATKYPPLGVRSYAGGRTMGYGPVDDSFSANENARTKCWPMIESREALNDVEAIAALP
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TVDGLFAGPTDLSMAAGNPRYSFSESDKNDIARIGAAARAAGKPWVLPAWTAPERAFGKL
CCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHH
HRADITVVGAQYALIRSAFHGLVDSLGSEGLL
HHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PDPSAPTCALRGNGGTHPFARRSLMSQSLAQFAFWLSSPSFPHIEIARGAGFTAVVLDI
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEE
EHGTFNLDDLDRVIPFCRALGIKVYAKVLGPLTEPIQQALDFGADAIIIPHIGALDHAKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
VTAATKYPPLGVRSYAGGRTMGYGPVDDSFSANENARTKCWPMIESREALNDVEAIAALP
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TVDGLFAGPTDLSMAAGNPRYSFSESDKNDIARIGAAARAAGKPWVLPAWTAPERAFGKL
CCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHH
HRADITVVGAQYALIRSAFHGLVDSLGSEGLL
HHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA