| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mutA [H]
Identifier: 158423397
GI number: 158423397
Start: 2026081
End: 2027913
Strand: Reverse
Name: mutA [H]
Synonym: AZC_1773
Alternate gene names: 158423397
Gene position: 2027913-2026081 (Counterclockwise)
Preceding gene: 158423398
Following gene: 158423396
Centisome position: 37.77
GC content: 72.01
Gene sequence:
>1833_bases ATGACCGCAACCCTGCCCTTCGTGACGCAGGCGGGCCCGGTAACCCGGGCGGACTGGCTGTCGCTGGTGGAAGGCGTGCT GAAAGGCGCGCCCTATGACAAGCGCCTCGTGACCCGCACCTCTGAGGGCCTTGCGCTGGACGCCCTCCCACCGCGCAGGG AAGAGGCCGTCCCCATCGCCGGACGGGCGGCAGGTGCGCCGTGGACGATCAGCGCGCGCGTCGACCAGCCGGACCTTGCC GCCGCCAATGCCCAGATCCTCGATGATCTGGAAAATGGCGCCTCCGGCCTCACCCTCGTCTATGCCTCGTCTCCCTCCGC CCACGGCTTCGGCCTGCCGGACGGCGCGGCGCTGGAGACGCTGCTCGCCAGCGTGATGCCGGACCTCATCGAGACGCGGC TGGAGAGCGGAGCCTTCAAGGGCCGCGAGAATGCCCTCGCCTTCGCTGATTTCATCGCGGCACGCGGGCTCGATCCGGCG CGTGTGAGCGTTTCCTTCGGCCTTGATCCGCTCGCGGACATGGCCGCGCGCGGCAGCGCACCCATGCCTTGGCCGGGCCT TGCCGAGCGGGTGGCGGAAAGCGCCGCTATCCTCAAGGCGCGCGGCTTCACCGGGCCGCTGCTGCGGGCGGACGGCGCCA TCCACCATGCGGCCGGTGCCAGCGATGCGCAGGAGCTGGCGGCGGTGCTGGCGGCGGCTGTCGCCTATCTGCGGGCGCTG GAGAAGGCCGGCTTCTCGCTGGAGGAGGCCGCCGGCCGTATCGAGGTGGCGCTGACGGCGGACGTGAACCAGACCGCAAC GCTCGCGAAAGTCCGCGCCATCCGCCTGCTGTGGGGCGCGGTGCTGCGGGAGGCCGGCATCGGGGCCGGGCCGCTGAAGG TCCACGCCACCACGGCGTGGCGCTCGCTCACCCGGCGCGATCCCTATGTGAACCTGCTGCGCGCCACCATCGCCGCCTTC GCGGCCGGCGTGGGCGGAGCGGACGGCCTCACCGTCCTGCCCTTCACGCAGGCCCTCGGCCTGCCGGATGCTCAGGCGCG GCGGCTCGCCCGCAACACGCAGCTCATCCTGCTGGAGGAAAGCCAGCTCCACCGCGTGGCCGATCCCGGTGCCGGCGCGG GCGCGGTAGAAGCGCATACGGATGGCCTTGCGGCTGCCGCGTGGGATCTCTTCCGCGCCATCGAAGGCAAGGGTGGGCTC GCCGAGGCGCTGGCCTCCGGCTGGTGGCAGGGCGAGTTGGCGGCGACCCGCGCCAAGCGGGCGAAGGATATCGCCACACG CAGGGAGCCGCTCACCGGCACGTCGGAATTCCCCATCCTCGGCCAGAGCGTGCCGGAGGTGCTCGCCCCCGTCCCCGCGC GGGAAGAAGCGCCGAACGATCTCGCCCTCGCGCCCCAGCGGCTCGCGGAGCCTTTCGAGGCGCTCCGCGATGCGGCCGAG GCGACGGGTACGCCTCAGGTGTTCCTCGCGACCCTCGGACCCATCGCCGCCTTCACCGCCCGCGCCACTTTCGCCAAGGC GCTGTTCGAGGCTGGCGGCCTCGCCGTGACCGTGACCGACGGTTATGCGGATTTCGATGCTCTCATCGCCGCGTTCAAGG CTTCCGGCACGGCCATCGCCTGCATCGCCTCCTCCGACGAGATCTACGAAGCGGAGGCCGCCACCATCGCGGCCGCGCTA AAGGCCGCGGGCGCCCGGCAGGTGTGGCTCGCGGGCCGGGGCGGCGATCTTGAGGCGACGTGGCGCGCAGCGGGCGTGGA CGACTTCATCTTCGCCGGCTGCGACGTGCTGTCGGTACTGAAGAAAGCACACGGGGCGCTGGGGATCGGGTGA
Upstream 100 bases:
>100_bases GGCGTCATCAAAGCCGTCCACGCCAAGGCCGGCGACAGTCTCGCCGTGGACGCGGTGATCCTCGAATTCGCGTGACGACG AAACACGGAAGGGCCGCACA
Downstream 100 bases:
>100_bases AATCTGGCAAAGCCCTCCCCCCTTGTGGGGGAGGGTTGGGAGGGGGGTAATGCCCTCTCCGAAAGGGCACGCTGGGGAAC GGGGAAAATCAAGGGCTGCC
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTATLPFVTQAGPVTRADWLSLVEGVLKGAPYDKRLVTRTSEGLALDALPPRREEAVPIAGRAAGAPWTISARVDQPDLA AANAQILDDLENGASGLTLVYASSPSAHGFGLPDGAALETLLASVMPDLIETRLESGAFKGRENALAFADFIAARGLDPA RVSVSFGLDPLADMAARGSAPMPWPGLAERVAESAAILKARGFTGPLLRADGAIHHAAGASDAQELAAVLAAAVAYLRAL EKAGFSLEEAAGRIEVALTADVNQTATLAKVRAIRLLWGAVLREAGIGAGPLKVHATTAWRSLTRRDPYVNLLRATIAAF AAGVGGADGLTVLPFTQALGLPDAQARRLARNTQLILLEESQLHRVADPGAGAGAVEAHTDGLAAAAWDLFRAIEGKGGL AEALASGWWQGELAATRAKRAKDIATRREPLTGTSEFPILGQSVPEVLAPVPAREEAPNDLALAPQRLAEPFEALRDAAE ATGTPQVFLATLGPIAAFTARATFAKALFEAGGLAVTVTDGYADFDALIAAFKASGTAIACIASSDEIYEAEAATIAAAL KAAGARQVWLAGRGGDLEATWRAAGVDDFIFAGCDVLSVLKKAHGALGIG
Sequences:
>Translated_610_residues MTATLPFVTQAGPVTRADWLSLVEGVLKGAPYDKRLVTRTSEGLALDALPPRREEAVPIAGRAAGAPWTISARVDQPDLA AANAQILDDLENGASGLTLVYASSPSAHGFGLPDGAALETLLASVMPDLIETRLESGAFKGRENALAFADFIAARGLDPA RVSVSFGLDPLADMAARGSAPMPWPGLAERVAESAAILKARGFTGPLLRADGAIHHAAGASDAQELAAVLAAAVAYLRAL EKAGFSLEEAAGRIEVALTADVNQTATLAKVRAIRLLWGAVLREAGIGAGPLKVHATTAWRSLTRRDPYVNLLRATIAAF AAGVGGADGLTVLPFTQALGLPDAQARRLARNTQLILLEESQLHRVADPGAGAGAVEAHTDGLAAAAWDLFRAIEGKGGL AEALASGWWQGELAATRAKRAKDIATRREPLTGTSEFPILGQSVPEVLAPVPAREEAPNDLALAPQRLAEPFEALRDAAE ATGTPQVFLATLGPIAAFTARATFAKALFEAGGLAVTVTDGYADFDALIAAFKASGTAIACIASSDEIYEAEAATIAAAL KAAGARQVWLAGRGGDLEATWRAAGVDDFIFAGCDVLSVLKKAHGALGIG >Mature_609_residues TATLPFVTQAGPVTRADWLSLVEGVLKGAPYDKRLVTRTSEGLALDALPPRREEAVPIAGRAAGAPWTISARVDQPDLAA ANAQILDDLENGASGLTLVYASSPSAHGFGLPDGAALETLLASVMPDLIETRLESGAFKGRENALAFADFIAARGLDPAR VSVSFGLDPLADMAARGSAPMPWPGLAERVAESAAILKARGFTGPLLRADGAIHHAAGASDAQELAAVLAAAVAYLRALE KAGFSLEEAAGRIEVALTADVNQTATLAKVRAIRLLWGAVLREAGIGAGPLKVHATTAWRSLTRRDPYVNLLRATIAAFA AGVGGADGLTVLPFTQALGLPDAQARRLARNTQLILLEESQLHRVADPGAGAGAVEAHTDGLAAAAWDLFRAIEGKGGLA EALASGWWQGELAATRAKRAKDIATRREPLTGTSEFPILGQSVPEVLAPVPAREEAPNDLALAPQRLAEPFEALRDAAEA TGTPQVFLATLGPIAAFTARATFAKALFEAGGLAVTVTDGYADFDALIAAFKASGTAIACIASSDEIYEAEAATIAAALK AAGARQVWLAGRGGDLEATWRAAGVDDFIFAGCDVLSVLKKAHGALGIG
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=470, Percent_Identity=27.6595744680851, Blast_Score=136, Evalue=6e-32, Organism=Escherichia coli, GI1789284, Length=450, Percent_Identity=27.1111111111111, Blast_Score=127, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25144500, Length=241, Percent_Identity=32.7800829875519, Blast_Score=125, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 62826; Mature: 62695
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLPFVTQAGPVTRADWLSLVEGVLKGAPYDKRLVTRTSEGLALDALPPRREEAVPIA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC GRAAGAPWTISARVDQPDLAAANAQILDDLENGASGLTLVYASSPSAHGFGLPDGAALET CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHH LLASVMPDLIETRLESGAFKGRENALAFADFIAARGLDPARVSVSFGLDPLADMAARGSA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHCCCC PMPWPGLAERVAESAAILKARGFTGPLLRADGAIHHAAGASDAQELAAVLAAAVAYLRAL CCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EKAGFSLEEAAGRIEVALTADVNQTATLAKVRAIRLLWGAVLREAGIGAGPLKVHATTAW HHCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH RSLTRRDPYVNLLRATIAAFAAGVGGADGLTVLPFTQALGLPDAQARRLARNTQLILLEE HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCHHHHHHHCCCEEEEEEH SQLHRVADPGAGAGAVEAHTDGLAAAAWDLFRAIEGKGGLAEALASGWWQGELAATRAKR HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHH AKDIATRREPLTGTSEFPILGQSVPEVLAPVPAREEAPNDLALAPQRLAEPFEALRDAAE HHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ATGTPQVFLATLGPIAAFTARATFAKALFEAGGLAVTVTDGYADFDALIAAFKASGTAIA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEE CIASSDEIYEAEAATIAAALKAAGARQVWLAGRGGDLEATWRAAGVDDFIFAGCDVLSVL EEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHH KKAHGALGIG HHHCCCCCCC >Mature Secondary Structure TATLPFVTQAGPVTRADWLSLVEGVLKGAPYDKRLVTRTSEGLALDALPPRREEAVPIA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC GRAAGAPWTISARVDQPDLAAANAQILDDLENGASGLTLVYASSPSAHGFGLPDGAALET CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHH LLASVMPDLIETRLESGAFKGRENALAFADFIAARGLDPARVSVSFGLDPLADMAARGSA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHCCCC PMPWPGLAERVAESAAILKARGFTGPLLRADGAIHHAAGASDAQELAAVLAAAVAYLRAL CCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EKAGFSLEEAAGRIEVALTADVNQTATLAKVRAIRLLWGAVLREAGIGAGPLKVHATTAW HHCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH RSLTRRDPYVNLLRATIAAFAAGVGGADGLTVLPFTQALGLPDAQARRLARNTQLILLEE HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCHHHHHHHCCCEEEEEEH SQLHRVADPGAGAGAVEAHTDGLAAAAWDLFRAIEGKGGLAEALASGWWQGELAATRAKR HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHH AKDIATRREPLTGTSEFPILGQSVPEVLAPVPAREEAPNDLALAPQRLAEPFEALRDAAE HHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ATGTPQVFLATLGPIAAFTARATFAKALFEAGGLAVTVTDGYADFDALIAAFKASGTAIA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEE CIASSDEIYEAEAATIAAALKAAGARQVWLAGRGGDLEATWRAAGVDDFIFAGCDVLSVL EEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHH KKAHGALGIG HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]