| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mutB [H]
Identifier: 158423396
GI number: 158423396
Start: 2023455
End: 2025620
Strand: Reverse
Name: mutB [H]
Synonym: AZC_1772
Alternate gene names: 158423396
Gene position: 2025620-2023455 (Counterclockwise)
Preceding gene: 158423397
Following gene: 158423395
Centisome position: 37.72
GC content: 67.96
Gene sequence:
>2166_bases ATGACCGCCATGAGCCGCTTGCCCGCCTTTGCCGACATCGAATGGCGCGCGCCGGAGCTTGCCCCGCCGGCGGATGCGCC CGCGCCCTGGCTGACGCCGGAAGGCATTCCGGTGAAGGGTCTCTATGGTCCGGCGGACATCGCGGGCCTCTCCTTCATCG ACACCTATCCCGGCATCGCGCCCTTCCTGCGCGGGCCCTACCCCACCATGTATGCGACCCAGCCCTGGACCATCCGGCAA TATGCCGGCTTCTCCACGGCGGAGGATTCCAACGCCTTCTACCGCCGCAACCTCGCGGCCGGGCAGAAGGGCCTGTCGGT CGCCTTCGATCTCGCCACCCATCGCGGCTATGACTCGGACCATCCGCGCGTCGCCGGCGACGTCGGCATGGCGGGGGTCG CCATCGACAGCATCTATGACATGCGCACGCTCTTCTCCGGCATTCCGCTGGACCAGATGAGCGTCTCCATGACCATGAAT GGCGCGGTGCTGCCCATTCTGGCTCTGTTCGTGGTGGCGGCGGAAGAACAGGGCGTGCCGGCGGCCAAGCTCTCCGGCAC CATCCAGAACGACATTCTCAAAGAATTCATGGTGCGGAACACCTATATCTATCCGCCCGCACCCTCCATGCGCATCATTT CCGACATCTTCGCCTTGACATCCAAGGAGATGCCGCGCTTCAACTCCATCTCCATTTCCGGCTACCACATGCAGGAAGCC GGGGCGACGCAGGACCTGGAGCTCGCCTATACGCTCGCGGACGGCGTCGAATATGTGCGCGCGGGCGCCAAAGCCGGCCT GCCCATCGACGCCTTCGCGCCGCGCCTTTCGTTCTTCTGGGCCATCGGCATGAACTTCTTCATGGAGGTGGCGAAGCTGC GCGCCGCGCGCCTCCTGTGGACGCGGCTGATGAGCGATCTCGGGGCCAAGAACCCCAAGTCCCTGCCCCTGCGCACCCAT TCGCAGACCTCCGGCTGGAGCCTCACGGCGCAGGACGTGTTCAACAACGTCATCCGCACCATGGTGGAAGCCATGGCGGC AACGCAGGGCCACACCCAGTCGCTGCACACCAATGCGCTGGACGAGGCGCTGGCCCTGCCCACCGACTTCTCCGCCCGCA TCGCCCGCAACACGCAGATCCTGCTGCAGCAGGAGAGCGGCACCACCCGCCAGATCGACCCCTGGGGCGGCTCCTTCTTC GTGGAGCGCCTCACCGCCGACCTCGCCGCCAAGGCGTGGGACCATATTCAGGAGGTGGAAGCACTGGGCGGCATGGCGAA GGCCATCGAGGCCGGCATCCCCAAGCTGCGCATCGAGGAAGCCGCCGCCACCACGCAGGCCCGCATCGACGGCGGCGCGC AGATCGTGGTGGGCGTCAACAAGTTCAAGCCCGAGCGCGAGACGCCCATCGACGTGCTGAAGGTGGACAATTCCGCCGTC CGCGCCGCGCAGATCGAGAAGCTGCGCCGCCTGAAGGCGGAGCGCGACCCGCAGGGCGTGGCCGCCGCGCTGGAGGCGCT GACCAATGGAGCGCGGGGCAACGGCAACCTGCTGGCGCTCGCCATCGACGCCGCCCGCGCCAAGGCGACAGTGGGCGAGA TTTCGGATGCGCTCGAAGCCGTCTTTGGTCGCCACCGGGCGGAAATCCGCGCCATTTCGGGCGTCTACAAGAGGGAGGCC GGCGCCATGACCGACAAGGTGGCGCAGGTGCAGCGCCTCACAGAAGCCTTCGAGCACAATGAGGGCCGCCGCCCGCGCAT CCTCGTCGCCAAGGTGGGACAGGACGGGCACGACCGGGGCCAGAAGGTGATCGCCTCCGCCTTCGCCGATCTCGGCTTCG ACGTGGACATCGGCCCCCTCTTCGCCACGCCCGAGGAAGCCGCCCGGCAGGCGGTGGAGAATGACGTCCATGTGGTGGGC ATCTCTTCGCTCGCCGCCGGCCACCTGACGCTCGTGCCCGCGCTCAAGGCGGCGCTGGAGGCGGAGGGGCGCGGCGACAT CATGGTGGTGGTGGGCGGCGTCGTGCCGCCGCAGGATTATGAGGCGCTGAAAGCCGCCGGCGCGGAAGCCATCTTCCCCC CCGGCACCGTCATCGCCGACGCCGCCCGCGACCTGCTGGCAACACTCTCCACCCGCCTCGGCCACGCGCAGGAGGCGGCG GAATAA
Upstream 100 bases:
>100_bases GCCGCGACAGGAAAACAGGGCCGCGCCCCAACAAGAGCCGCGAAGGCCAATGGAACGGGATGGAACGGGCCGCGCCAACG CGCACCCGAAATGAGGTAGG
Downstream 100 bases:
>100_bases GCGCCGAAACCTAGGAAAATGAATAGCGCTCAAATTGACGATGAAGCCCTCCCTTACATCATAGGAACAACAGACAAGCA ACTATTTGATTCCGGAATGG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MTAMSRLPAFADIEWRAPELAPPADAPAPWLTPEGIPVKGLYGPADIAGLSFIDTYPGIAPFLRGPYPTMYATQPWTIRQ YAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMN GAVLPILALFVVAAEEQGVPAAKLSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFALTSKEMPRFNSISISGYHMQEA GATQDLELAYTLADGVEYVRAGAKAGLPIDAFAPRLSFFWAIGMNFFMEVAKLRAARLLWTRLMSDLGAKNPKSLPLRTH SQTSGWSLTAQDVFNNVIRTMVEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQILLQQESGTTRQIDPWGGSFF VERLTADLAAKAWDHIQEVEALGGMAKAIEAGIPKLRIEEAAATTQARIDGGAQIVVGVNKFKPERETPIDVLKVDNSAV RAAQIEKLRRLKAERDPQGVAAALEALTNGARGNGNLLALAIDAARAKATVGEISDALEAVFGRHRAEIRAISGVYKREA GAMTDKVAQVQRLTEAFEHNEGRRPRILVAKVGQDGHDRGQKVIASAFADLGFDVDIGPLFATPEEAARQAVENDVHVVG ISSLAAGHLTLVPALKAALEAEGRGDIMVVVGGVVPPQDYEALKAAGAEAIFPPGTVIADAARDLLATLSTRLGHAQEAA E
Sequences:
>Translated_721_residues MTAMSRLPAFADIEWRAPELAPPADAPAPWLTPEGIPVKGLYGPADIAGLSFIDTYPGIAPFLRGPYPTMYATQPWTIRQ YAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMN GAVLPILALFVVAAEEQGVPAAKLSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFALTSKEMPRFNSISISGYHMQEA GATQDLELAYTLADGVEYVRAGAKAGLPIDAFAPRLSFFWAIGMNFFMEVAKLRAARLLWTRLMSDLGAKNPKSLPLRTH SQTSGWSLTAQDVFNNVIRTMVEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQILLQQESGTTRQIDPWGGSFF VERLTADLAAKAWDHIQEVEALGGMAKAIEAGIPKLRIEEAAATTQARIDGGAQIVVGVNKFKPERETPIDVLKVDNSAV RAAQIEKLRRLKAERDPQGVAAALEALTNGARGNGNLLALAIDAARAKATVGEISDALEAVFGRHRAEIRAISGVYKREA GAMTDKVAQVQRLTEAFEHNEGRRPRILVAKVGQDGHDRGQKVIASAFADLGFDVDIGPLFATPEEAARQAVENDVHVVG ISSLAAGHLTLVPALKAALEAEGRGDIMVVVGGVVPPQDYEALKAAGAEAIFPPGTVIADAARDLLATLSTRLGHAQEAA E >Mature_720_residues TAMSRLPAFADIEWRAPELAPPADAPAPWLTPEGIPVKGLYGPADIAGLSFIDTYPGIAPFLRGPYPTMYATQPWTIRQY AGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMNG AVLPILALFVVAAEEQGVPAAKLSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFALTSKEMPRFNSISISGYHMQEAG ATQDLELAYTLADGVEYVRAGAKAGLPIDAFAPRLSFFWAIGMNFFMEVAKLRAARLLWTRLMSDLGAKNPKSLPLRTHS QTSGWSLTAQDVFNNVIRTMVEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQILLQQESGTTRQIDPWGGSFFV ERLTADLAAKAWDHIQEVEALGGMAKAIEAGIPKLRIEEAAATTQARIDGGAQIVVGVNKFKPERETPIDVLKVDNSAVR AAQIEKLRRLKAERDPQGVAAALEALTNGARGNGNLLALAIDAARAKATVGEISDALEAVFGRHRAEIRAISGVYKREAG AMTDKVAQVQRLTEAFEHNEGRRPRILVAKVGQDGHDRGQKVIASAFADLGFDVDIGPLFATPEEAARQAVENDVHVVGI SSLAAGHLTLVPALKAALEAEGRGDIMVVVGGVVPPQDYEALKAAGAEAIFPPGTVIADAARDLLATLSTRLGHAQEAAE
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=692, Percent_Identity=62.8612716763006, Blast_Score=895, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=683, Percent_Identity=63.3967789165447, Blast_Score=854, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=690, Percent_Identity=63.3333333333333, Blast_Score=897, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 77266; Mature: 77135
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMSRLPAFADIEWRAPELAPPADAPAPWLTPEGIPVKGLYGPADIAGLSFIDTYPGIA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCHH PFLRGPYPTMYATQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSD HHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCC HPRVAGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMNGAVLPILALFVVAAEEQGVP CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCC AAKLSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFALTSKEMPRFNSISISGYHMQEA HHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCC GATQDLELAYTLADGVEYVRAGAKAGLPIDAFAPRLSFFWAIGMNFFMEVAKLRAARLLW CCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRLMSDLGAKNPKSLPLRTHSQTSGWSLTAQDVFNNVIRTMVEAMAATQGHTQSLHTNAL HHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DEALALPTDFSARIARNTQILLQQESGTTRQIDPWGGSFFVERLTADLAAKAWDHIQEVE HHHHCCCCCCHHHHHCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ALGGMAKAIEAGIPKLRIEEAAATTQARIDGGAQIVVGVNKFKPERETPIDVLKVDNSAV HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCHHH RAAQIEKLRRLKAERDPQGVAAALEALTNGARGNGNLLALAIDAARAKATVGEISDALEA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH VFGRHRAEIRAISGVYKREAGAMTDKVAQVQRLTEAFEHNEGRRPRILVAKVGQDGHDRG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH QKVIASAFADLGFDVDIGPLFATPEEAARQAVENDVHVVGISSLAAGHLTLVPALKAALE HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHHH AEGRGDIMVVVGGVVPPQDYEALKAAGAEAIFPPGTVIADAARDLLATLSTRLGHAQEAA CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHC E C >Mature Secondary Structure TAMSRLPAFADIEWRAPELAPPADAPAPWLTPEGIPVKGLYGPADIAGLSFIDTYPGIA CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCHH PFLRGPYPTMYATQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSD HHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCC HPRVAGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMNGAVLPILALFVVAAEEQGVP CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCC AAKLSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFALTSKEMPRFNSISISGYHMQEA HHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCC GATQDLELAYTLADGVEYVRAGAKAGLPIDAFAPRLSFFWAIGMNFFMEVAKLRAARLLW CCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRLMSDLGAKNPKSLPLRTHSQTSGWSLTAQDVFNNVIRTMVEAMAATQGHTQSLHTNAL HHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DEALALPTDFSARIARNTQILLQQESGTTRQIDPWGGSFFVERLTADLAAKAWDHIQEVE HHHHCCCCCCHHHHHCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ALGGMAKAIEAGIPKLRIEEAAATTQARIDGGAQIVVGVNKFKPERETPIDVLKVDNSAV HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCHHH RAAQIEKLRRLKAERDPQGVAAALEALTNGARGNGNLLALAIDAARAKATVGEISDALEA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH VFGRHRAEIRAISGVYKREAGAMTDKVAQVQRLTEAFEHNEGRRPRILVAKVGQDGHDRG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH QKVIASAFADLGFDVDIGPLFATPEEAARQAVENDVHVVGISSLAAGHLTLVPALKAALE HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHHH AEGRGDIMVVVGGVVPPQDYEALKAAGAEAIFPPGTVIADAARDLLATLSTRLGHAQEAA CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]