| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fabZ
Identifier: 158423327
GI number: 158423327
Start: 1951322
End: 1951798
Strand: Direct
Name: fabZ
Synonym: AZC_1703
Alternate gene names: 158423327
Gene position: 1951322-1951798 (Clockwise)
Preceding gene: 158423326
Following gene: 158423328
Centisome position: 36.34
GC content: 63.31
Gene sequence:
>477_bases ATGAGCGAAGAAACCAAGGCGGACGAGACGAAGGTTCTGGACAGCATCGACATCCTGCGCATCCTGGCGCTCCTGCCGCA TCGCTATCCGTTCCTGATGGTGGACCGGATCGAGGCGATCGACAGCGATCTGTCCTGCGTCGGCTACAAGAACGTGACGG CCAACGAGCCGCACTTCCAGGGTCACTTCCCGAACAATCCGGTCATGCCGGGCGTGCTCATCATCGAGGGCATGGCCCAG ACGGCGGGTGCCATCTGCATCCATGCCAAGGGCGCCGACCGCAAGCCTTCGCTGGTCTATTTCATGACCATCGACGAGGC GAAGTTCCGTCGCCCGGTCCGCCCCGGCGACGTGCTCGAATATCACATGACCCGCCTCAACAAGCGCCGCAACATGTGGT GGTACCGCGGCGAAGCCCGGGTGGGCGGAGAAATCGTGGCGGAGGCGCGTGTTGGCGCCATGATCGCCGAGGAGTGA
Upstream 100 bases:
>100_bases CGGCCAAGCCGGTGCGCGAGTGGTTCCGCGAAATGACCACCTTGAAGAAGCTGGCTGAGTCGAGGGCGCGTTCCGGCGCC GCGACGCCGGGGGAAGAAGA
Downstream 100 bases:
>100_bases ACGTGGCCCTGATCGACCCGACTGCCCGCGTTGCCGATGGCGCGTGGCTCGCCGATGATGTGGAAGTTGGACCCTACTGC ATCGTCGGCCCCGATGTGAC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQGHFPNNPVMPGVLIIEGMAQ TAGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLEYHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE
Sequences:
>Translated_158_residues MSEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQGHFPNNPVMPGVLIIEGMAQ TAGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLEYHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE >Mature_157_residues SEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQGHFPNNPVMPGVLIIEGMAQT AGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLEYHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=135, Percent_Identity=45.9259259259259, Blast_Score=129, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_AZOC5 (A8I489)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001524619.1 - ProteinModelPortal: A8I489 - SMR: A8I489 - GeneID: 5688144 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_1703 - HOGENOM: HBG433282 - OMA: EFTQKRS - ProtClustDB: PRK00006 - BioCyc: ACAU438753:AZC_1703-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 17869; Mature: 17738
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: ACT_SITE 62-62
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQ CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCEEECCCCCCCCCCCC GHFPNNPVMPGVLIIEGMAQTAGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLE CCCCCCCCCCCEEEEECHHHCCCEEEEEECCCCCCCCEEEEEEECHHHHCCCCCCCHHHH YHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE HHHHHHHHHCCCEEEECCCCCCCEEEEHHHHCEEECCC >Mature Secondary Structure SEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCEEECCCCCCCCCCCC GHFPNNPVMPGVLIIEGMAQTAGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLE CCCCCCCCCCCEEEEECHHHCCCEEEEEECCCCCCCCEEEEEEECHHHHCCCCCCCHHHH YHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE HHHHHHHHHCCCEEEECCCCCCCEEEEHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA