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The map label for this gene is tsf

Identifier: 158423318

GI number: 158423318

Start: 1941039

End: 1941962

Strand: Direct

Name: tsf

Synonym: AZC_1694

Alternate gene names: 158423318

Gene position: 1941039-1941962 (Clockwise)

Preceding gene: 158423317

Following gene: 158423319

Centisome position: 36.15

GC content: 68.51

Gene sequence:

>924_bases
ATGGCCGCGATCACTGCAGGGCTCGTGAAGGAACTGCGCGACAAGACCGGCGCCGGCATGATGGACTGCAAGGCGGCGCT
CACCGAGAACAACGGCGACATCGAGGCCGCCATCGACTGGCTGCGCAAGAAGGGCCTTGCCAAGGCCGCCAAGAAGGCTG
GCCGCGTGGCCGCCGAGGGCCTCGTCGCCGTCGAGTCGTCCGGCCACTATGCCGCCGCCATCGAGGTGAACGCCGAGACC
GACTTCGTCGCCCGCAACGCCGATTTCCAGGCGTTCGTGCGTGAGGCCGCCAAGGTGGCCCTCAACACCGACGGCTCCAT
CGAGGCGGTCGCCGCCGCCCACTTCCCGGGCGAGAGCGTCACCGTCGCCGATAAGCTGGCCACCCTGATCGCCACCATCG
GCGAGAACATGACGCTGCGCCGCTCGGTGCGCCTCACGGTCTCGGCCGGCGTGATCGCCACCTACGTGCACGGCGCCGTC
TCCGAGGGGCAGGGCCGCATCGGCGTGCTCGTGGCGCTCGAGTCGCAGGGCGACGTGGAGAAGCTCTCCACCCTCGGCCG
CCAGATCGCCATGCATGTGGCCGCCCTCAACCCGCTGGCGCTCGACGCCTCGGGCATCGACGAGGCGACCATCGCCCGCG
AGAAGGCCATCCTGCTCGAGAAGCATCAGGGCAAGCCGGCCAACGTGCAGGAGAAGATCGCCGAGAGCGGCATGAAGACC
TACTTCAAGGAGGTCACCCTCCTGGAGCAGCCCTTCGTGCATGACGGCTCCAAGTCGGTCGCTCAGGTGCTGAAGGAGAA
CGAGGGCTCGGTCGGCGCGCCGATCACGCTCAAGGGCTTCGTGCGCTATGCCCTCGGCGAGGGCATCGAGAAGGAAGAGA
GCGACTTCGCGGCCGAGGTCGCTGCTGCGGCTGGCCAGTCCTGA

Upstream 100 bases:

>100_bases
CTTAAAGGCCTTTTGAGTTCTGGTTTAGGGGCGCAGCCCCGGCGGCCGGTCTGGGAAACACTCAGGCCGGCCGTGGTATG
AGAAGAAGAGGAAGCTGAGC

Downstream 100 bases:

>100_bases
CCGCCGGCGAAGGCGAAACGGCAATGCCGGGCCTTCCCTATCCACGCATCCTGGTCAAGGTCTCGGGCGAGGCCTTGATG
GGATCGGAACCGTTCGGGCT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEGLVAVESSGHYAAAIEVNAET
DFVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESVTVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAV
SEGQGRIGVLVALESQGDVEKLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKT
YFKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEVAAAAGQS

Sequences:

>Translated_307_residues
MAAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEGLVAVESSGHYAAAIEVNAET
DFVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESVTVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAV
SEGQGRIGVLVALESQGDVEKLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKT
YFKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEVAAAAGQS
>Mature_306_residues
AAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEGLVAVESSGHYAAAIEVNAETD
FVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESVTVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAVS
EGQGRIGVLVALESQGDVEKLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKTY
FKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEVAAAAGQS

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=220, Percent_Identity=32.7272727272727, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI291084500, Length=241, Percent_Identity=31.9502074688797, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI291084502, Length=94, Percent_Identity=43.6170212765958, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI291084498, Length=94, Percent_Identity=43.6170212765958, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1786366, Length=309, Percent_Identity=46.2783171521036, Blast_Score=229, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17561440, Length=301, Percent_Identity=29.5681063122924, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI19921466, Length=305, Percent_Identity=28.5245901639344, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_AZOC5 (A8I464)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524610.1
- ProteinModelPortal:   A8I464
- SMR:   A8I464
- GeneID:   5688104
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1694
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- BioCyc:   ACAU438753:AZC_1694-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32024; Mature: 31893

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEG
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
LVAVESSGHYAAAIEVNAETDFVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESV
EEEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHEEECCCCCEEEEEEECCCCCCC
TVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAVSEGQGRIGVLVALESQGDVE
HHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
KLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKT
HHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
YFKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEV
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AAAAGQS
HHHCCCC
>Mature Secondary Structure 
AAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEG
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
LVAVESSGHYAAAIEVNAETDFVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESV
EEEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHEEECCCCCEEEEEEECCCCCCC
TVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAVSEGQGRIGVLVALESQGDVE
HHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
KLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKT
HHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
YFKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEV
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AAAAGQS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA