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The map label for this gene is yqjC [H]

Identifier: 158423308

GI number: 158423308

Start: 1926864

End: 1927268

Strand: Direct

Name: yqjC [H]

Synonym: AZC_1684

Alternate gene names: 158423308

Gene position: 1926864-1927268 (Clockwise)

Preceding gene: 158423307

Following gene: 158423309

Centisome position: 35.88

GC content: 65.68

Gene sequence:

>405_bases
ATGATCGGACGCCTCAATCACGTGGCCATCGCGGTCAAGGACATCGCGGCGGCCTCGGCCCTCTATCGTGACACGATGGG
GGCCGATGTCTCGGAGGCGGTGCCGCAGACCGAGCATGGCGTGACGACCGTCTTCATCCATCTGCCCAACACCAAGATCG
AGCTGCTGGAGCCGCTGGGTGCGGATTCGCCCATCGCCAAGTTCCTGGAGCGCAATCCGGACGGCGGCATCCACCACATC
TGCTATGAGGTGGACGATATCCTCGCCGCCCGCGACCGGCTGAAGGCCACGGGCGCGCGGGTGCTGGGCACCGGGGAGCC
GAAGATCGGTGCCCACGGCAAGCCGGTGCTGTTCCTGCATCCCAAGGACTTCAACGGCACGCTGGTCGAGCTGGAACAAG
CCTGA

Upstream 100 bases:

>100_bases
GGGCAAAAAGCCGGTTTGCCACGTCCATATCGTCGAGGTTTGATAGGCCCCATAATGCGCGTGCGCCGTGCGGGCGCCGC
CACTGTGGGGAGACATGGGC

Downstream 100 bases:

>100_bases
GGAGCGCCGGCGGTGAACATCGGCGCCATTCTCGCCATCTATTTCGTCGCCTGGTGGATCTGCCTGTTCGCGGTGCTGCC
GTTCGGCGTGCGCAACCATG

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIGRLNHVAIAVKDIAAASALYRDTMGADVSEAVPQTEHGVTTVFIHLPNTKIELLEPLGADSPIAKFLERNPDGGIHHI
CYEVDDILAARDRLKATGARVLGTGEPKIGAHGKPVLFLHPKDFNGTLVELEQA

Sequences:

>Translated_134_residues
MIGRLNHVAIAVKDIAAASALYRDTMGADVSEAVPQTEHGVTTVFIHLPNTKIELLEPLGADSPIAKFLERNPDGGIHHI
CYEVDDILAARDRLKATGARVLGTGEPKIGAHGKPVLFLHPKDFNGTLVELEQA
>Mature_134_residues
MIGRLNHVAIAVKDIAAASALYRDTMGADVSEAVPQTEHGVTTVFIHLPNTKIELLEPLGADSPIAKFLERNPDGGIHHI
CYEVDDILAARDRLKATGARVLGTGEPKIGAHGKPVLFLHPKDFNGTLVELEQA

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=133, Percent_Identity=64.6616541353383, Blast_Score=169, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI17506387, Length=133, Percent_Identity=60.9022556390977, Blast_Score=163, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14380; Mature: 14380

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRLNHVAIAVKDIAAASALYRDTMGADVSEAVPQTEHGVTTVFIHLPNTKIELLEPLG
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCC
ADSPIAKFLERNPDGGIHHICYEVDDILAARDRLKATGARVLGTGEPKIGAHGKPVLFLH
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGTLVELEQA
CCCCCCEEEEEECC
>Mature Secondary Structure
MIGRLNHVAIAVKDIAAASALYRDTMGADVSEAVPQTEHGVTTVFIHLPNTKIELLEPLG
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCC
ADSPIAKFLERNPDGGIHHICYEVDDILAARDRLKATGARVLGTGEPKIGAHGKPVLFLH
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGTLVELEQA
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]