Click here to switch to the map view.

The map label for this gene is viuB [H]

Identifier: 158423246

GI number: 158423246

Start: 1851580

End: 1852653

Strand: Reverse

Name: viuB [H]

Synonym: AZC_1622

Alternate gene names: 158423246

Gene position: 1852653-1851580 (Counterclockwise)

Preceding gene: 158423247

Following gene: 158423245

Centisome position: 34.5

GC content: 71.32

Gene sequence:

>1074_bases
ATGGCCGCCCCCGCGCTTCTGCACGCCGCGACCCGTGTTCCCCTGCCCGATCCGGCCACCATGCTGGAGAAGCTCGCCGC
GCATTTCGAGACCCACGGCACCGTCACGCGCGCCGATGGCCGCGCCACCTTCATCGGCACGTTCGGCACGGCGGATCTGG
TGGCAGACGGCACCCATCTCGTCTGCCATGTGGAGAGCGCTTCGGCGGCGGGACTTTCGGTCTCCAAGATGGTGCTGGCG
GAGCACATCTGCACGTTCGCGGGCGATGCGCGCCCGGACTTCACTTGGACAGGCGATCTCGCCACCGAGGCCCGCCTGCC
CTATCTGCGCGAGCTTACCGTAAAGGCCGCCCGGCAAATCACGCCCCGGATGCGGCGGGTGGTGCTCAGGGGCGATGTGT
CGGGGCTGCTGGCCAACGGCCTCCATGTGCGCCTGCTCATTCCGCCGAAGGGCCGCATGCCCGTGTGGCCCACCGCGCAG
GCGGATGGGCGGGTGCTGTGGCCGCAGGGCGCGGATGCCCTCACCCCGCGCGTCTATACGCTGCGCCATGTGGATGTGGC
GGTGGGCGAAGCCGTGCTCGACATCGTGCTTCACCCCGGTTCGCCGGGCTCGGACTGGGCGCGGGAAGCCGCACCCGGCC
AGCCCGCCGCTGTCATGGGACCCGGCGGCGGACTGCTGCCAGAGGCGGACTGGGTTCTGTTCGCGGGAGATGAGACGGCC
CTGCCCGCCATCGCACGCATGGTCTCGGAGCTGCCCGCCCATGTCCGCGCGGTGGTGCGCATCGAGATCGCCGACGCGGC
GGAAGAGCAGGAGATGCCCTCCCGCGCCAGCGTCGATCTCGTCTGGCTCCATCGCAACGGCGCGGAGGCGGGCACGAGCC
GCCTGCTGGAAGAGGCGGTGACGACGATCCCCCTCCCCATGGACGCCGACGCTCCCTATCTTTGGGCGGGCTGCGAGCAG
GCCGCCGCCCGTGCCCTGCGCGCCCATGCGGCCGCGCTCGGCCTTCCCAAAGACCGCCGCTCCGTTGCCGCTTACTGGCG
CCGGGGCTATCAGGGAGTGGACCTCGGCGAGTGA

Upstream 100 bases:

>100_bases
CTTCCCCTACCAGATCCCGGTGGGCCTCTTCGCCGCGCTGGTGGGCGGGCACTATCTCATCTGGCTGCTGCGACGCAGCC
CCGGCACAGGAGCCTGATCC

Downstream 100 bases:

>100_bases
CGCGGCCCGCCGCCCCGCCCCACGGAAGCATCATGTCCTTGCTGCGCGCCTTCTTCGCCTATTACCGGCCCTACAAGGGC
CTGTTCCTGCTGGATTTCAC

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAAPALLHAATRVPLPDPATMLEKLAAHFETHGTVTRADGRATFIGTFGTADLVADGTHLVCHVESASAAGLSVSKMVLA
EHICTFAGDARPDFTWTGDLATEARLPYLRELTVKAARQITPRMRRVVLRGDVSGLLANGLHVRLLIPPKGRMPVWPTAQ
ADGRVLWPQGADALTPRVYTLRHVDVAVGEAVLDIVLHPGSPGSDWAREAAPGQPAAVMGPGGGLLPEADWVLFAGDETA
LPAIARMVSELPAHVRAVVRIEIADAAEEQEMPSRASVDLVWLHRNGAEAGTSRLLEEAVTTIPLPMDADAPYLWAGCEQ
AAARALRAHAAALGLPKDRRSVAAYWRRGYQGVDLGE

Sequences:

>Translated_357_residues
MAAPALLHAATRVPLPDPATMLEKLAAHFETHGTVTRADGRATFIGTFGTADLVADGTHLVCHVESASAAGLSVSKMVLA
EHICTFAGDARPDFTWTGDLATEARLPYLRELTVKAARQITPRMRRVVLRGDVSGLLANGLHVRLLIPPKGRMPVWPTAQ
ADGRVLWPQGADALTPRVYTLRHVDVAVGEAVLDIVLHPGSPGSDWAREAAPGQPAAVMGPGGGLLPEADWVLFAGDETA
LPAIARMVSELPAHVRAVVRIEIADAAEEQEMPSRASVDLVWLHRNGAEAGTSRLLEEAVTTIPLPMDADAPYLWAGCEQ
AAARALRAHAAALGLPKDRRSVAAYWRRGYQGVDLGE
>Mature_356_residues
AAPALLHAATRVPLPDPATMLEKLAAHFETHGTVTRADGRATFIGTFGTADLVADGTHLVCHVESASAAGLSVSKMVLAE
HICTFAGDARPDFTWTGDLATEARLPYLRELTVKAARQITPRMRRVVLRGDVSGLLANGLHVRLLIPPKGRMPVWPTAQA
DGRVLWPQGADALTPRVYTLRHVDVAVGEAVLDIVLHPGSPGSDWAREAAPGQPAAVMGPGGGLLPEADWVLFAGDETAL
PAIARMVSELPAHVRAVVRIEIADAAEEQEMPSRASVDLVWLHRNGAEAGTSRLLEEAVTTIPLPMDADAPYLWAGCEQA
AARALRAHAAALGLPKDRRSVAAYWRRGYQGVDLGE

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=250, Percent_Identity=28.8, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 37984; Mature: 37853

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPALLHAATRVPLPDPATMLEKLAAHFETHGTVTRADGRATFIGTFGTADLVADGTHL
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCHHHEECCCEE
VCHVESASAAGLSVSKMVLAEHICTFAGDARPDFTWTGDLATEARLPYLRELTVKAARQI
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHH
TPRMRRVVLRGDVSGLLANGLHVRLLIPPKGRMPVWPTAQADGRVLWPQGADALTPRVYT
CHHHHHHHHHCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE
LRHVDVAVGEAVLDIVLHPGSPGSDWAREAAPGQPAAVMGPGGGLLPEADWVLFAGDETA
EEEHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCHH
LPAIARMVSELPAHVRAVVRIEIADAAEEQEMPSRASVDLVWLHRNGAEAGTSRLLEEAV
HHHHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
TTIPLPMDADAPYLWAGCEQAAARALRAHAAALGLPKDRRSVAAYWRRGYQGVDLGE
HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AAPALLHAATRVPLPDPATMLEKLAAHFETHGTVTRADGRATFIGTFGTADLVADGTHL
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCHHHEECCCEE
VCHVESASAAGLSVSKMVLAEHICTFAGDARPDFTWTGDLATEARLPYLRELTVKAARQI
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHH
TPRMRRVVLRGDVSGLLANGLHVRLLIPPKGRMPVWPTAQADGRVLWPQGADALTPRVYT
CHHHHHHHHHCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE
LRHVDVAVGEAVLDIVLHPGSPGSDWAREAAPGQPAAVMGPGGGLLPEADWVLFAGDETA
EEEHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCHH
LPAIARMVSELPAHVRAVVRIEIADAAEEQEMPSRASVDLVWLHRNGAEAGTSRLLEEAV
HHHHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
TTIPLPMDADAPYLWAGCEQAAARALRAHAAALGLPKDRRSVAAYWRRGYQGVDLGE
HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]