| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fhuB [H]
Identifier: 158423247
GI number: 158423247
Start: 1852657
End: 1854609
Strand: Reverse
Name: fhuB [H]
Synonym: AZC_1623
Alternate gene names: 158423247
Gene position: 1854609-1852657 (Counterclockwise)
Preceding gene: 158423248
Following gene: 158423246
Centisome position: 34.54
GC content: 73.37
Gene sequence:
>1953_bases TTGCCTCGCGCACCACTGGCGGTGGCCGGGCTCGCCCTTCTGGCGCTGACCCTGTGCGTCATGGGCCTGCTGCGGCAGCC GGTCCTGCCCGGCGATCCGGCCACGGCGCGCGCGCTGGAACAGGTCGTGCTCTGGCACAGCCTGCTGCCACGCGCCGTGG TGGCGCTGCTGGCGGGTGCGGCGCTGGGCCTGTCGGGCGCGCTGTTGCAACGGGTGCTGCGCAACCCCATCGCCGATCCC TCGACGCTGGGCATCGCCTCCGGCGCGCAATTGGCCCTCACCGCCTCCGCCTTGCTCATTCCAGCCCTCGCCGAATGGCC CCGCGAGGTCGTGGCGCTCATGGGCGGCGTTACCGCCGTCGGCCTCTTGCTGATGCTGAGCTGGAAGCGCGGGCTGGAGC CGATCACGGTCGTGCTCTCGGGCATGACCCTCTCGCTCATCTGCGCCGCCTTGAGTTCGGCCCTCGTGCTGGCGCGCGGC GAATATGTGCTCTCGCTTTTCGTCTGGGGCGCCGGCTCGCTGCACCAGCAGAGCTGGGGGCCTGCGCTGGGGCTGGCGTG GCGCTTCGCCTTCGGCCTTGCGGCAGCCGTGCTCCTGCTCCGCCCGCTCTCGGTTCTGACGCTGGACGACTCCAGCGCCC GCAGCCTTGGCATGGCCGTGAACGGCGCCCGGCTCGCCATCATCGCCCTCGCCGTGTGGCTGGCGGCGAGCGTCGTGGCG CTGGTGGGCATCATCGGCTTCGTCGGCCTTGCCGCGCCGGCCTTCGCGAGGCTCGCGGGCGCGCGCACGCCCCGCGCCCA ATTGCTGCTGGCGCCGCTCCTCGGCGCGCTGCTGCTGTGGCTCACGGACGGGCTCGTGCAGGTCTTGGGCGCCGACGTCC TGCCCACGGGCGCCGCCACGGGCCTCATCGGTGGGCCGCTGCTGCTATGGCTGCTGCCGCGCCTCAAGCACGTCCAGCGC CCGCAAGCCGCAGCACCGACAGGCCGGCGCCTCTCCCATCCCCTGCGCGGTCTCCTGTTTCTCGCCGGCGGGCTGGCGCT TCTCATCCTCGCCGCTCTGCTGATCGGGCGCTCCTATGAGGGCTGGCGGCTGGCGACGGGCGCGCTGTTCGAGGCCCTCG CCCCTTTCCGCGTGCCGCGCGTGGTCGCCGCCGCAGCGGCGGGCGCGCTCCTGGGGGCGGCGGGCACGCTGATGCAGCGC CTCACGGGTAATCCTTTGGCGGGGCCGGAGGTGCTAGGCGTCAGTGCCGGGGCGGGCGTCGGGCTCTCGGTGGTTCTGCT GCTCCTGCCCGCGCCCACGGTTGCCGTCATGATGGGCGGCAGCGCAGCGGGCGCGCTCGTGGCGCTGCTTGGCATTCTCG CCTTCGCGCTCGCCACCGGCTTCGGGCCTGAGCGGCTGCTGCTTGGCGGCATCGCGCTCGGCGCCGCGAGCCTTGCCTTC ATCTCCGCCGTTCTGGCCTCGGGAGATGCCCGCGCCTTCCTGCTGCTGGGCTGGATGGCCGGCACCACGGATCGCGTGGG CAGCGTGGAGGCGGGCGCGGCGGTGGGCCTCGTGCTCCTGCTTGTCCCGCCGCTGCTGCTGGCCTCCCGCTGGCTCGACA TATTGCCGCTCGGCAGCACCATGGCCCGCGCGCTGGGCGTGCCTTTGCTCGCAAGCCGCCTGCTCCTTGCGCTTGCCGCC GCGCTGATGACGGCCTGCGCTGCCTTCATCGTCGGCCCGCTGAGCCTCGTCGGCCTCATCGGCCCGCATCTGGCGCGCCT CTCGGGCTTCGCGCGCGGCGCCCACCAGTTGCTCGCCGCCGCGCTCATCGGCGCGGGCCTGATGGTGTTAGCGGACTGGC TAGGGCGCACGCTCGCCTTCCCCTACCAGATCCCGGTGGGCCTCTTCGCCGCGCTGGTGGGCGGGCACTATCTCATCTGG CTGCTGCGACGCAGCCCCGGCACAGGAGCCTGA
Upstream 100 bases:
>100_bases GCCCTGCCCGCGGCCCTGCGTTTCGCACGCCTCCTCACCGATGCGCTCCCCTTTGCGAAGGCGGCCGCCCGTGGCTGATG TCGCCCGCCTCCCCCGCCCC
Downstream 100 bases:
>100_bases TCCATGGCCGCCCCCGCGCTTCTGCACGCCGCGACCCGTGTTCCCCTGCCCGATCCGGCCACCATGCTGGAGAAGCTCGC CGCGCATTTCGAGACCCACG
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MPRAPLAVAGLALLALTLCVMGLLRQPVLPGDPATARALEQVVLWHSLLPRAVVALLAGAALGLSGALLQRVLRNPIADP STLGIASGAQLALTASALLIPALAEWPREVVALMGGVTAVGLLLMLSWKRGLEPITVVLSGMTLSLICAALSSALVLARG EYVLSLFVWGAGSLHQQSWGPALGLAWRFAFGLAAAVLLLRPLSVLTLDDSSARSLGMAVNGARLAIIALAVWLAASVVA LVGIIGFVGLAAPAFARLAGARTPRAQLLLAPLLGALLLWLTDGLVQVLGADVLPTGAATGLIGGPLLLWLLPRLKHVQR PQAAAPTGRRLSHPLRGLLFLAGGLALLILAALLIGRSYEGWRLATGALFEALAPFRVPRVVAAAAAGALLGAAGTLMQR LTGNPLAGPEVLGVSAGAGVGLSVVLLLLPAPTVAVMMGGSAAGALVALLGILAFALATGFGPERLLLGGIALGAASLAF ISAVLASGDARAFLLLGWMAGTTDRVGSVEAGAAVGLVLLLVPPLLLASRWLDILPLGSTMARALGVPLLASRLLLALAA ALMTACAAFIVGPLSLVGLIGPHLARLSGFARGAHQLLAAALIGAGLMVLADWLGRTLAFPYQIPVGLFAALVGGHYLIW LLRRSPGTGA
Sequences:
>Translated_650_residues MPRAPLAVAGLALLALTLCVMGLLRQPVLPGDPATARALEQVVLWHSLLPRAVVALLAGAALGLSGALLQRVLRNPIADP STLGIASGAQLALTASALLIPALAEWPREVVALMGGVTAVGLLLMLSWKRGLEPITVVLSGMTLSLICAALSSALVLARG EYVLSLFVWGAGSLHQQSWGPALGLAWRFAFGLAAAVLLLRPLSVLTLDDSSARSLGMAVNGARLAIIALAVWLAASVVA LVGIIGFVGLAAPAFARLAGARTPRAQLLLAPLLGALLLWLTDGLVQVLGADVLPTGAATGLIGGPLLLWLLPRLKHVQR PQAAAPTGRRLSHPLRGLLFLAGGLALLILAALLIGRSYEGWRLATGALFEALAPFRVPRVVAAAAAGALLGAAGTLMQR LTGNPLAGPEVLGVSAGAGVGLSVVLLLLPAPTVAVMMGGSAAGALVALLGILAFALATGFGPERLLLGGIALGAASLAF ISAVLASGDARAFLLLGWMAGTTDRVGSVEAGAAVGLVLLLVPPLLLASRWLDILPLGSTMARALGVPLLASRLLLALAA ALMTACAAFIVGPLSLVGLIGPHLARLSGFARGAHQLLAAALIGAGLMVLADWLGRTLAFPYQIPVGLFAALVGGHYLIW LLRRSPGTGA >Mature_649_residues PRAPLAVAGLALLALTLCVMGLLRQPVLPGDPATARALEQVVLWHSLLPRAVVALLAGAALGLSGALLQRVLRNPIADPS TLGIASGAQLALTASALLIPALAEWPREVVALMGGVTAVGLLLMLSWKRGLEPITVVLSGMTLSLICAALSSALVLARGE YVLSLFVWGAGSLHQQSWGPALGLAWRFAFGLAAAVLLLRPLSVLTLDDSSARSLGMAVNGARLAIIALAVWLAASVVAL VGIIGFVGLAAPAFARLAGARTPRAQLLLAPLLGALLLWLTDGLVQVLGADVLPTGAATGLIGGPLLLWLLPRLKHVQRP QAAAPTGRRLSHPLRGLLFLAGGLALLILAALLIGRSYEGWRLATGALFEALAPFRVPRVVAAAAAGALLGAAGTLMQRL TGNPLAGPEVLGVSAGAGVGLSVVLLLLPAPTVAVMMGGSAAGALVALLGILAFALATGFGPERLLLGGIALGAASLAFI SAVLASGDARAFLLLGWMAGTTDRVGSVEAGAAVGLVLLLVPPLLLASRWLDILPLGSTMARALGVPLLASRLLLALAAA LMTACAAFIVGPLSLVGLIGPHLARLSGFARGAHQLLAAALIGAGLMVLADWLGRTLAFPYQIPVGLFAALVGGHYLIWL LRRSPGTGA
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=617, Percent_Identity=43.9222042139384, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1790741, Length=295, Percent_Identity=33.5593220338983, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1790740, Length=312, Percent_Identity=33.974358974359, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=33.5570469798658, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786804, Length=273, Percent_Identity=32.967032967033, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=36.9718309859155, Blast_Score=86, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 65711; Mature: 65580
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAPLAVAGLALLALTLCVMGLLRQPVLPGDPATARALEQVVLWHSLLPRAVVALLAGA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLSGALLQRVLRNPIADPSTLGIASGAQLALTASALLIPALAEWPREVVALMGGVTAV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GLLLMLSWKRGLEPITVVLSGMTLSLICAALSSALVLARGEYVLSLFVWGAGSLHQQSWG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCC PALGLAWRFAFGLAAAVLLLRPLSVLTLDDSSARSLGMAVNGARLAIIALAVWLAASVVA CHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVGIIGFVGLAAPAFARLAGARTPRAQLLLAPLLGALLLWLTDGLVQVLGADVLPTGAAT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH GLIGGPLLLWLLPRLKHVQRPQAAAPTGRRLSHPLRGLLFLAGGLALLILAALLIGRSYE HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GWRLATGALFEALAPFRVPRVVAAAAAGALLGAAGTLMQRLTGNPLAGPEVLGVSAGAGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCH GLSVVLLLLPAPTVAVMMGGSAAGALVALLGILAFALATGFGPERLLLGGIALGAASLAF HHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISAVLASGDARAFLLLGWMAGTTDRVGSVEAGAAVGLVLLLVPPLLLASRWLDILPLGST HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MARALGVPLLASRLLLALAAALMTACAAFIVGPLSLVGLIGPHLARLSGFARGAHQLLAA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIGAGLMVLADWLGRTLAFPYQIPVGLFAALVGGHYLIWLLRRSPGTGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCC >Mature Secondary Structure PRAPLAVAGLALLALTLCVMGLLRQPVLPGDPATARALEQVVLWHSLLPRAVVALLAGA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLSGALLQRVLRNPIADPSTLGIASGAQLALTASALLIPALAEWPREVVALMGGVTAV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GLLLMLSWKRGLEPITVVLSGMTLSLICAALSSALVLARGEYVLSLFVWGAGSLHQQSWG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCC PALGLAWRFAFGLAAAVLLLRPLSVLTLDDSSARSLGMAVNGARLAIIALAVWLAASVVA CHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVGIIGFVGLAAPAFARLAGARTPRAQLLLAPLLGALLLWLTDGLVQVLGADVLPTGAAT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH GLIGGPLLLWLLPRLKHVQRPQAAAPTGRRLSHPLRGLLFLAGGLALLILAALLIGRSYE HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GWRLATGALFEALAPFRVPRVVAAAAAGALLGAAGTLMQRLTGNPLAGPEVLGVSAGAGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCH GLSVVLLLLPAPTVAVMMGGSAAGALVALLGILAFALATGFGPERLLLGGIALGAASLAF HHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISAVLASGDARAFLLLGWMAGTTDRVGSVEAGAAVGLVLLLVPPLLLASRWLDILPLGST HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MARALGVPLLASRLLLALAAALMTACAAFIVGPLSLVGLIGPHLARLSGFARGAHQLLAA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIGAGLMVLADWLGRTLAFPYQIPVGLFAALVGGHYLIWLLRRSPGTGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]