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The map label for this gene is aapJ [H]

Identifier: 158423209

GI number: 158423209

Start: 1808776

End: 1809786

Strand: Direct

Name: aapJ [H]

Synonym: AZC_1585

Alternate gene names: 158423209

Gene position: 1808776-1809786 (Clockwise)

Preceding gene: 158423207

Following gene: 158423210

Centisome position: 33.68

GC content: 63.11

Gene sequence:

>1011_bases
GTGAAACGCATCCTCATCGCCGTGGCAGGTGTTCTTGCCCTGACCGCGGGCGCAGCTAAAGCCGGCACCCTCGATGACGT
GAAGGCCCGCGGCGCGCTCAACTGCGGCGTCAGCCAGGGCCTTCCGGGCTTCTCCAGCCCCGACGACAAGGGCAATTGGA
AGGGCCTGGACGTTGATTTCTGCCGCGCCGTCGCGGCCGCCATCTTCAATGATCCCAACAAGGTCCGCTTCACGCCCCTC
TCGGCGAAGGACCGCTTCACCGCGCTCCAGTCCGGCGCCATCGACCTGCTGTCGCGCAACACCACCTGGACCATGTCCCG
CGATACCACGCTCGGCTTCAACTTTGCCGGCGTGATGTATTATGACGGCCAGGGCTTCATCGTCCGCAAGTCGCTGAACA
TCAAGTCGGCGAAGGAACTCAACGGCGCGTCCATCTGCGTGCAGGCCGGCACCACCACCGAGCTCAACCTCGGCGACTTC
TTCCGTGCCAACAACATGAAGTATGAAGTCATCACCTTCTCGACCGAAGACGAGACCGTGAAGGCTTATGAATCCGGCCG
CTGCGACAGCTTCACCTCCGACCAGTCGCAGATCTATGCCATCAAGCTCAAGCTCACGAATGCGGCGGACCATGTGGTTC
TGCCGGAGCTGATCTCCAAGGAGCCGCTCGGCCCGCTCGTGCGCCACGGCGACGACCAGTGGTTCGATCTGGTGAAGTGG
ACCTATTACGCGCTGCTGAACTCCGAGGAGCTCGGCGTCTCGCAGAAGACCCTCGACCAGTCGATGACCTCCACCAATCC
GGAGATCAAGCGCCTCCTCGGCACCGACGGCAAGTTCGGCGAGGGCATCGGCCTCACCAACGACTGGGTGGTCCGCATCA
TCAAGGCCGTGGGCAATTACGGCGAGATCTTCGACCGCAACGTCGGCACCGGCTCGCCGCTCGGCATCGACCGCGGCGAG
AACAAGCTCTGGAACAAGGGCGGCCTCCAGTACGGCATGCCCATCCGCTGA

Upstream 100 bases:

>100_bases
AGACGCCGGGGAAACGGGCGTCTATTCCGTCCTGGCGGGGCGGGGACCGAGTTGGCCAACATAATCCCCATCAGGGGGGC
CATCAGAGAAGGGACCATCC

Downstream 100 bases:

>100_bases
CGCGCACGCTGTGCCCGGCGACAGGCCGGGCACCGCCCTTATGCCAGAGCCGGCGTGACGGGGAGGGAGGGCCTCGTCCA
TCGCGGCGGCACTTCCAGCC

Product: extracellular substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKRILIAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDFCRAVAAAIFNDPNKVRFTPL
SAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDF
FRANNMKYEVITFSTEDETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKW
TYYALLNSEELGVSQKTLDQSMTSTNPEIKRLLGTDGKFGEGIGLTNDWVVRIIKAVGNYGEIFDRNVGTGSPLGIDRGE
NKLWNKGGLQYGMPIR

Sequences:

>Translated_336_residues
MKRILIAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDFCRAVAAAIFNDPNKVRFTPL
SAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDF
FRANNMKYEVITFSTEDETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKW
TYYALLNSEELGVSQKTLDQSMTSTNPEIKRLLGTDGKFGEGIGLTNDWVVRIIKAVGNYGEIFDRNVGTGSPLGIDRGE
NKLWNKGGLQYGMPIR
>Mature_336_residues
MKRILIAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDFCRAVAAAIFNDPNKVRFTPL
SAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDF
FRANNMKYEVITFSTEDETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKW
TYYALLNSEELGVSQKTLDQSMTSTNPEIKRLLGTDGKFGEGIGLTNDWVVRIIKAVGNYGEIFDRNVGTGSPLGIDRGE
NKLWNKGGLQYGMPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=233, Percent_Identity=23.6051502145923, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36619; Mature: 36619

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDF
CCEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCHHCCCCCCCCCCCCCCCCCCCHHH
CRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMY
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCEECEEEEEEEE
YDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTEDETV
ECCCCEEEEECCCCCCHHHCCCCEEEEECCCCCEECCCHHHCCCCEEEEEEEEECCCCHH
KAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKW
HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHHH
TYYALLNSEELGVSQKTLDQSMTSTNPEIKRLLGTDGKFGEGIGLTNDWVVRIIKAVGNY
HHHHEECCHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRILIAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLDVDF
CCEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECCHHCCCCCCCCCCCCCCCCCCCHHH
CRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAGVMY
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCEECEEEEEEEE
YDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTEDETV
ECCCCEEEEECCCCCCHHHCCCCEEEEECCCCCEECCCHHHCCCCEEEEEEEEECCCCHH
KAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDLVKW
HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHHH
TYYALLNSEELGVSQKTLDQSMTSTNPEIKRLLGTDGKFGEGIGLTNDWVVRIIKAVGNY
HHHHEECCHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]