| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423207
Identifier: 158423207
GI number: 158423207
Start: 1807018
End: 1807353
Strand: Direct
Name: 158423207
Synonym: AZC_1583
Alternate gene names: NA
Gene position: 1807018-1807353 (Clockwise)
Preceding gene: 158423206
Following gene: 158423209
Centisome position: 33.65
GC content: 66.37
Gene sequence:
>336_bases ATGCTGCTGGTCCAGCTGGTGCAGTCGGTCGGCGACTATCTGCACGACGTGTTCGTGACCCAATTCGACGGTTGGGTGGT CCTCGGTTTCGTGGCGCAGGTGATGTTCACCGGCCGCTTCGTGGTGCAGTGGATCGCCAGCGAGCGGGCCGGCCGCTCGG TGCTCCCCTTCGCCTTCTGGACCTTCTCCCTCGGTGGCGGGACGCTGCTGCTGATCTACGCCATCTACCGGCGCGACCCG GTCTTCATCGCCGGCCAGGCGCTCTCCACCTTCATCTACATCCGCAACCTGCAGTTCGCGATCCGCGAGCGGCGCGCCAA CCGCGCGACCACCTGA
Upstream 100 bases:
>100_bases GGCTTCTGGAACCGTCTCTGGGTCGGCATCGCCGATCTTCTGGGTGTCTGGTGGCTGATCCGACGGCGGCGGGTGCCGCA GGTCGTGGAGTGAGAGCGAG
Downstream 100 bases:
>100_bases TACGGAGCGCGGCCGCCGCCCGGCCGGACCGGACGGCGGCGCAAGGCATCACGCGGCGGCGGCCATCTTCTCCAGCGCCT GCTCGAGATCAGCGATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Domain Protein; Lipid A Biosynthesis; Lipid A Biosynthesis-Like; Lipid-A-Disaccharide Synthase Domain-Containing Protein; Transport-Related Membrane Protein; Lipid A Biosynthesis N-Terminal; Lipid-A-Disaccharide Synthase; Lipid A Biosynthesis Protein; Lipid A Biosynthesis N-Terminal Domain Family; LAB_N Domain-Containing Protein; Lipid A Disaccharide Synthase; Lipid A Biosynthesis N-Terminal Domain Protein
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLLVQLVQSVGDYLHDVFVTQFDGWVVLGFVAQVMFTGRFVVQWIASERAGRSVLPFAFWTFSLGGGTLLLIYAIYRRDP VFIAGQALSTFIYIRNLQFAIRERRANRATT
Sequences:
>Translated_111_residues MLLVQLVQSVGDYLHDVFVTQFDGWVVLGFVAQVMFTGRFVVQWIASERAGRSVLPFAFWTFSLGGGTLLLIYAIYRRDP VFIAGQALSTFIYIRNLQFAIRERRANRATT >Mature_111_residues MLLVQLVQSVGDYLHDVFVTQFDGWVVLGFVAQVMFTGRFVVQWIASERAGRSVLPFAFWTFSLGGGTLLLIYAIYRRDP VFIAGQALSTFIYIRNLQFAIRERRANRATT
Specific function: Unknown
COG id: COG3952
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12654; Mature: 12654
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVQLVQSVGDYLHDVFVTQFDGWVVLGFVAQVMFTGRFVVQWIASERAGRSVLPFAFW CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH TFSLGGGTLLLIYAIYRRDPVFIAGQALSTFIYIRNLQFAIRERRANRATT EEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLVQLVQSVGDYLHDVFVTQFDGWVVLGFVAQVMFTGRFVVQWIASERAGRSVLPFAFW CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH TFSLGGGTLLLIYAIYRRDPVFIAGQALSTFIYIRNLQFAIRERRANRATT EEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA