| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423115
Identifier: 158423115
GI number: 158423115
Start: 1691951
End: 1692859
Strand: Direct
Name: 158423115
Synonym: AZC_1491
Alternate gene names: NA
Gene position: 1691951-1692859 (Clockwise)
Preceding gene: 158423114
Following gene: 158423121
Centisome position: 31.51
GC content: 67.11
Gene sequence:
>909_bases ATGACCAAGACCGTGGCGAACCCGGCCGGGGAGCCCTGGCAGTGGGAGGAGGCCCACTGGCGCGGCCTCATCAATCAGGT GCGGGCGGGCGAGCGGCTGGCGCCCAAGAACTGGCCCGGCGGGGCGCGCTGTGCCGTGGCGCTGTCGTTCGATGCCGACC ACGAGACCAACGAACTGCGGGACGGCGGCAAGTCCATCGGCCGCATGGCGTGGGGCCAGTATGGCAATCGGGTGGGCGTG CCGCGCGTGCTGGAACTGCTGAAGCGCCACGACATTCCGGCGAGCTTCTACGTGCCGGCCGTGGTGGCGCTGACCTATCC GGACGAGCAGCGCCGGGTGATTGCGGAAGGCCACGAGATCGGCATCCATGGCTGGATCCATGAGCTCAATTCCGTGCTGC CCTATGAGGTGGAGCGCGACCTCATGTTCCGCGCCGCCGACACGCTGGAGCATGTGACCGGCGTGCGCCCCGTGGGCCTG CGCACGCCCTCCTGGGACTTCAGCCCCAACACGCTGCGCATCGAGACCGAGCTCGGCCTCCTCTATGATTCCTCGCTCAT GGCCGACGAGGACTGCTACGACCTGCTCATGGACGGCGTCTCCACGGGCATCGTCGAGGTGCCGGTGGAGTGGATCCGCG ACGACGCGGTCTATTTCATGATGCACCGCTTCCAGTCGCTGCGGCCCTATACGCCGCCGAAGGACGTGCTGGACATCTTC CTGCGCGAGTTCGATGCCGCTTACGAGGCGGGCGGGCTGTTCCAGCTCACCATGCACCCGCACATCATCACGCCGCGCTC GCGCATCTGGATCCTCGAGGAGGTGATCCGCCACGCCAAGGCCAAGGGCGATGTGTGGTTCGCGACCCACGCGCAGGTCG CCGAATATGCCAAGGCTAACAAGGCCTGA
Upstream 100 bases:
>100_bases TCGCCTCCGATCTCGCGAGCTTCGTGAACGGGCAGGTGCTGCCGGTGGACGGCGGCAAATAGAAACAGGCGGAACGCCAG ATGTCGAAAAGGACAAGCGC
Downstream 100 bases:
>100_bases GCCTTTCGTGCTGATGACAAAGGAAAAGCCCGGTCCGCAGGCGCGGGCCGGGCTTTTCCGTGTGGGCTCCTGTATCGGTC GCGTCAGTCGCGGAAGACGA
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Hydrolase; Chitin Deacetylase; Polysaccharide Deacetylase Protein Pda4B; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTKTVANPAGEPWQWEEAHWRGLINQVRAGERLAPKNWPGGARCAVALSFDADHETNELRDGGKSIGRMAWGQYGNRVGV PRVLELLKRHDIPASFYVPAVVALTYPDEQRRVIAEGHEIGIHGWIHELNSVLPYEVERDLMFRAADTLEHVTGVRPVGL RTPSWDFSPNTLRIETELGLLYDSSLMADEDCYDLLMDGVSTGIVEVPVEWIRDDAVYFMMHRFQSLRPYTPPKDVLDIF LREFDAAYEAGGLFQLTMHPHIITPRSRIWILEEVIRHAKAKGDVWFATHAQVAEYAKANKA
Sequences:
>Translated_302_residues MTKTVANPAGEPWQWEEAHWRGLINQVRAGERLAPKNWPGGARCAVALSFDADHETNELRDGGKSIGRMAWGQYGNRVGV PRVLELLKRHDIPASFYVPAVVALTYPDEQRRVIAEGHEIGIHGWIHELNSVLPYEVERDLMFRAADTLEHVTGVRPVGL RTPSWDFSPNTLRIETELGLLYDSSLMADEDCYDLLMDGVSTGIVEVPVEWIRDDAVYFMMHRFQSLRPYTPPKDVLDIF LREFDAAYEAGGLFQLTMHPHIITPRSRIWILEEVIRHAKAKGDVWFATHAQVAEYAKANKA >Mature_301_residues TKTVANPAGEPWQWEEAHWRGLINQVRAGERLAPKNWPGGARCAVALSFDADHETNELRDGGKSIGRMAWGQYGNRVGVP RVLELLKRHDIPASFYVPAVVALTYPDEQRRVIAEGHEIGIHGWIHELNSVLPYEVERDLMFRAADTLEHVTGVRPVGLR TPSWDFSPNTLRIETELGLLYDSSLMADEDCYDLLMDGVSTGIVEVPVEWIRDDAVYFMMHRFQSLRPYTPPKDVLDIFL REFDAAYEAGGLFQLTMHPHIITPRSRIWILEEVIRHAKAKGDVWFATHAQVAEYAKANKA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34296; Mature: 34165
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTVANPAGEPWQWEEAHWRGLINQVRAGERLAPKNWPGGARCAVALSFDADHETNELR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH DGGKSIGRMAWGQYGNRVGVPRVLELLKRHDIPASFYVPAVVALTYPDEQRRVIAEGHEI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEEECCCHHHHHHHCCCEE GIHGWIHELNSVLPYEVERDLMFRAADTLEHVTGVRPVGLRTPSWDFSPNTLRIETELGL CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECE LYDSSLMADEDCYDLLMDGVSTGIVEVPVEWIRDDAVYFMMHRFQSLRPYTPPKDVLDIF EECCCCCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LREFDAAYEAGGLFQLTMHPHIITPRSRIWILEEVIRHAKAKGDVWFATHAQVAEYAKAN HHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCC KA CC >Mature Secondary Structure TKTVANPAGEPWQWEEAHWRGLINQVRAGERLAPKNWPGGARCAVALSFDADHETNELR CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH DGGKSIGRMAWGQYGNRVGVPRVLELLKRHDIPASFYVPAVVALTYPDEQRRVIAEGHEI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEEECCCHHHHHHHCCCEE GIHGWIHELNSVLPYEVERDLMFRAADTLEHVTGVRPVGLRTPSWDFSPNTLRIETELGL CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECE LYDSSLMADEDCYDLLMDGVSTGIVEVPVEWIRDDAVYFMMHRFQSLRPYTPPKDVLDIF EECCCCCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LREFDAAYEAGGLFQLTMHPHIITPRSRIWILEEVIRHAKAKGDVWFATHAQVAEYAKAN HHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCC KA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA