| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423111
Identifier: 158423111
GI number: 158423111
Start: 1687647
End: 1688864
Strand: Direct
Name: 158423111
Synonym: AZC_1487
Alternate gene names: NA
Gene position: 1687647-1688864 (Clockwise)
Preceding gene: 158423107
Following gene: 158423113
Centisome position: 31.43
GC content: 72.5
Gene sequence:
>1218_bases ATGTTGTTCGCAATGATTGAACGGAAAAACACCCTCTCCGCCCTCGCGCCCCGCGCCACAGCGGCCCTGATGCTGGCCGC ATGCGGCCTCGCGCCCGCGTTCGCGGCGTCCGATCCGGTGCAGCGTCCCTCCCTCTATTCGGCCACCGCACGGATGCGGG CGGTGCCGCTGCCCCTGCCGCGCCCGCCGGAACTGGAAGAGGAGGACGCCCAGCAGGCCGGCGCCGAGGACGGCGCCCAG AACCACGGGCAGGCCGTGGCCTCGCTGCCGTCCAACCCGCCCTCGCTCTATACGACGGCGGCGCCGCCCAATCCGCAGCA GGCCTATGCGGTCGAGCCGCCGCCGGTGGCCGCCCGAAGCTTCGTCCTGCCGCCACCCCTGCCGGAAAGCCCTCACACGC TGGAGGCCAATCGCGCGCCGCCCGGCAATCTGCCCGCCGCCTGCGCGAGCCTCGTGCAGCAGAACATCATGGTCGCCGCC GCCGCTCCGCCCATCGGTGGCGGCAAGGGAGCCTGCGCGGTGCCGAGCCCGGTCCAGCTCAGCGCCGTGCGGCTGGAGGA CGGCACCACGGTCACGCTCCAGCCGGCGGCGACGCTGCGCTGCGACGCGGCGGTGGCCGTCACTCAATGGGTGCGCGAGG ATCTCTCGCGGGCGGCGATGGAACTGGGCGGGCGGCTCGACACGGTGAAGGTCGCCGCCTCCTATGACTGCCGCTCCCGC AACCGCATCGCCGGCGCCAAGATCAGCGACCACGGCATGGGCATCGCCATGGACGTGGGCGGCGTCGTGCTGGACGACAA GCGCGTCTATGAGGTGAAAGGCAACGGCCTGCCCATGGCGTTGCAGGCCTCCATGAAGGCCTCCGCCTGCTCGCGCTTCA CCACCGTGCTCGGGCCGGGATCGGACGGCTATCACGAGGACCATGTCCATGTGGACCTCGCCCAGCGCTATCTGAACATT CGCCTGTGCCGCTGGGAAATCCGTCCCACCTCCATCGCGCTGCCGCGCTCCCTGCCGGGTGCAGGGGCCTCCGTTGCGGT GGCGTCCGCGCCGGCGAGCCCGCAGGCCACCGCCGAGGCGGTGGTGAGCGCGCAAGCCGGCACAGCCACCTTCCAGACCG GGGAAGAGGCGATGGTGGAAGAGGACGTGCCTCTGCCCCTGCCGCGCCCGCCCATCGCCGCCAACGGCCGCCAGCCGGCA CGGCGCACCGGCGGCTGA
Upstream 100 bases:
>100_bases GTCCTTGTCGAACAGGAGCGCCTTCAGGCCGGTCATGGGGAGCTTCGTTCCGTGGAGCGGTAAGGGAGGGGCGGTGACGC CGGAGAGGGCGTCATTTACT
Downstream 100 bases:
>100_bases CCGGGGTCCGGCGCGGACAGGACCGCGCCGTCGCCCCCTCAGCGGGCGCGGGGCCGCAGATGGTCCCGCGTGCTGCTCAG GGCCTGTGCCGTCTCGATCA
Product: extensin-like protein
Products: NA
Alternate protein names: Extensin-Like; Extensin-Like Protein; Extensin-Like Protein C-Terminus
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA RRTGG
Sequences:
>Translated_405_residues MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA RRTGG >Mature_405_residues MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA RRTGG
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41924; Mature: 41924
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLP CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHEEECCCCC RPPELEEEDAQQAGAEDGAQNHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARS CCCCCCHHHHHHCCCCCCCHHCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCC FVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAAAAPPIGGGKGACAVPSPVQL EECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEE SAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR EEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPG CCCCCCEECCCCCEEEEECCCEEECCCEEEEECCCCCCEEEHHHHHHHHHHHHHEEECCC SDGYHEDHVHVDLAQRYLNIRLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEA CCCCCCCCEEHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH VVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPARRTGG HHHCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLP CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHEEECCCCC RPPELEEEDAQQAGAEDGAQNHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARS CCCCCCHHHHHHCCCCCCCHHCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCC FVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAAAAPPIGGGKGACAVPSPVQL EECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEE SAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR EEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPG CCCCCCEECCCCCEEEEECCCEEECCCEEEEECCCCCCEEEHHHHHHHHHHHHHEEECCC SDGYHEDHVHVDLAQRYLNIRLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEA CCCCCCCCEEHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH VVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPARRTGG HHHCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA